RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 C7orf66A4D0T2 115 aa11.26□□□□□ -0.61
UBE2D4-209ENST00000454428 HIST1H1EP10412 219 aaKnown RBP11.26□□□□□ -0.61
UBE2D4-209ENST00000454428 TNFSF8P32971 234 aa11.26□□□□□ -0.61
UBE2D4-209ENST00000454428 PDE6HQ13956 83 aa11.26□□□□□ -0.61
UBE2D4-209ENST00000454428 TMEM78Q5T7P6 136 aa11.26□□□□□ -0.61
UBE2D4-209ENST00000454428 Q6ZRG5 221 aa11.26□□□□□ -0.61
UBE2D4-209ENST00000454428 NHLRC2Q8NBF2 726 aa11.26□□□□□ -0.61
UBE2D4-209ENST00000454428 TRAV8-6A0A0B4J262 113 aa11.25□□□□□ -0.61
UBE2D4-209ENST00000454428 IGHV3-16A0A0C4DH30 117 aa11.25□□□□□ -0.61
UBE2D4-209ENST00000454428 SCGB1D2O95969 90 aa11.25□□□□□ -0.61
UBE2D4-209ENST00000454428 GATA1P15976 413 aaPredicted RBP11.25□□□□□ -0.61
UBE2D4-209ENST00000454428 TMEM183BQ1AE95 376 aa11.25□□□□□ -0.61
UBE2D4-209ENST00000454428 OR10J3Q5JRS4 329 aa11.25□□□□□ -0.61
UBE2D4-209ENST00000454428 FAM122CQ6P4D5 195 aa11.25□□□□□ -0.61
UBE2D4-209ENST00000454428 TMEM183AQ8IXX5 376 aa11.25□□□□□ -0.61
UBE2D4-209ENST00000454428 OR1L4Q8NGR5 311 aa11.25□□□□□ -0.61
UBE2D4-209ENST00000454428 DAZAP1Q96EP5 407 aaKnown RBP11.25□□□□□ -0.61
UBE2D4-209ENST00000454428 SPXQ9BT56 116 aa11.25□□□□□ -0.61
UBE2D4-209ENST00000454428 TM2D2Q9BX73 214 aa11.25□□□□□ -0.61
UBE2D4-209ENST00000454428 TIMM9Q9Y5J7 89 aa11.25□□□□□ -0.61
UBE2D4-209ENST00000454428 FABP12A6NFH5 140 aa11.24□□□□□ -0.61
UBE2D4-209ENST00000454428 ZNF266Q14584 549 aa11.24□□□□□ -0.61
UBE2D4-209ENST00000454428 TOMM5Q8N4H5 51 aa11.24□□□□□ -0.61
UBE2D4-209ENST00000454428 OR4C5Q8NGB2 326 aa11.24□□□□□ -0.61
UBE2D4-209ENST00000454428 PFDN5Q99471 154 aa11.24□□□□□ -0.61
UBE2D4-209ENST00000454428 TRBV7-9A0A0J9YWB2 115 aa11.23□□□□□ -0.61
UBE2D4-209ENST00000454428 IGLV2-8P01709 118 aa11.23□□□□□ -0.61
UBE2D4-209ENST00000454428 ZNF138P52744 262 aa11.23□□□□□ -0.61
UBE2D4-209ENST00000454428 UBE2MP61081 183 aaKnown RBP11.23□□□□□ -0.61
UBE2D4-209ENST00000454428 LELP1Q5T871 98 aa11.23□□□□□ -0.61
UBE2D4-209ENST00000454428 BAALCQ8WXS3 180 aa11.23□□□□□ -0.61
UBE2D4-209ENST00000454428 SLC39A9Q9NUM3 307 aa11.23□□□□□ -0.61
UBE2D4-209ENST00000454428 WDR83OSQ9Y284 106 aa11.23□□□□□ -0.61
UBE2D4-209ENST00000454428 MBPP02686 304 aaPredicted RBP11.22□□□□□ -0.61
UBE2D4-209ENST00000454428 RPL29P47914 159 aaKnown RBP11.22□□□□□ -0.61
UBE2D4-209ENST00000454428 ASAH1Q13510 395 aa11.22□□□□□ -0.61
UBE2D4-209ENST00000454428 IAH1Q2TAA2 248 aaPredicted RBP11.22□□□□□ -0.61
UBE2D4-209ENST00000454428 TDRG1Q3Y452 100 aa11.22□□□□□ -0.61
UBE2D4-209ENST00000454428 Q6AWC8 147 aa11.22□□□□□ -0.61
UBE2D4-209ENST00000454428 SLC25A29Q8N8R3 303 aa11.22□□□□□ -0.61
UBE2D4-209ENST00000454428 SLIRPQ9GZT3 109 aaKnown RBP11.22□□□□□ -0.61
UBE2D4-209ENST00000454428 RS1O15537 224 aa11.21□□□□□ -0.61
UBE2D4-209ENST00000454428 PFN1P07737 140 aaKnown RBP11.21□□□□□ -0.61
UBE2D4-209ENST00000454428 AP3S2P59780 193 aa11.21□□□□□ -0.61
UBE2D4-209ENST00000454428 C12orf45Q8N5I9 185 aaPredicted RBP11.21□□□□□ -0.61
UBE2D4-209ENST00000454428 FAM167A-AS1Q96KT0 104 aa11.21□□□□□ -0.61
UBE2D4-209ENST00000454428 SLC25A2Q9BXI2 301 aa11.21□□□□□ -0.61
UBE2D4-209ENST00000454428 AAMDCQ9H7C9 122 aa11.21□□□□□ -0.61
UBE2D4-209ENST00000454428 TRGV11A0A075B6L2 103 aa11.2□□□□□ -0.62
UBE2D4-209ENST00000454428 M0R2P5 195 aa11.2□□□□□ -0.62
UBE2D4-209ENST00000454428 RAB31Q13636 194 aa11.2□□□□□ -0.62
UBE2D4-209ENST00000454428 VWC2Q2TAL6 325 aa11.2□□□□□ -0.62
UBE2D4-209ENST00000454428 GCSAMLQ5JQS6 135 aa11.2□□□□□ -0.62
UBE2D4-209ENST00000454428 FLVCR2Q9UPI3 526 aa11.2□□□□□ -0.62
UBE2D4-209ENST00000454428 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
UBE2D4-209ENST00000454428 V9GYH0 126 aa11.2□□□□□ -0.62
UBE2D4-209ENST00000454428 GNRH2O43555 120 aa11.19□□□□□ -0.62
UBE2D4-209ENST00000454428 CST7O76096 145 aa11.19□□□□□ -0.62
UBE2D4-209ENST00000454428 BAK1Q16611 211 aa11.19□□□□□ -0.62
UBE2D4-209ENST00000454428 C11orf1Q9H5F2 150 aa11.19□□□□□ -0.62
UBE2D4-209ENST00000454428 UQCC1Q9NVA1 299 aa11.19□□□□□ -0.62
UBE2D4-209ENST00000454428 GSKIPQ9P0R6 139 aa11.19□□□□□ -0.62
UBE2D4-209ENST00000454428 TRAV8-3A0A0A6YYJ7 113 aa11.18□□□□□ -0.62
UBE2D4-209ENST00000454428 RNF222A6NCQ9 220 aa11.18□□□□□ -0.62
UBE2D4-209ENST00000454428 RBFOX3A6NFN3 312 aa11.18□□□□□ -0.62
UBE2D4-209ENST00000454428 RPL37AP61513 92 aaKnown RBP11.18□□□□□ -0.62
UBE2D4-209ENST00000454428 PYDC2Q56P42 97 aa11.18□□□□□ -0.62
UBE2D4-209ENST00000454428 FAM159AQ6UWV7 190 aa11.18□□□□□ -0.62
UBE2D4-209ENST00000454428 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
UBE2D4-209ENST00000454428 CHAC2Q8WUX2 184 aa11.18□□□□□ -0.62
UBE2D4-209ENST00000454428 DNAJC30Q96LL9 226 aa11.18□□□□□ -0.62
UBE2D4-209ENST00000454428 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
UBE2D4-209ENST00000454428 IGLV2-11P01706 119 aa11.17□□□□□ -0.62
UBE2D4-209ENST00000454428 NBEAP1P0C6P0 100 aa11.17□□□□□ -0.62
UBE2D4-209ENST00000454428 ACOT6Q3I5F7 207 aaPredicted RBP11.17□□□□□ -0.62
UBE2D4-209ENST00000454428 DEDD2Q8WXF8 326 aa11.17□□□□□ -0.62
UBE2D4-209ENST00000454428 GTSF1LQ9H1H1 148 aa11.17□□□□□ -0.62
UBE2D4-209ENST00000454428 GPN1Q9HCN4 374 aaPredicted RBP11.17□□□□□ -0.62
UBE2D4-209ENST00000454428 UBE2L5PA0A1B0GUS4 154 aa11.16□□□□□ -0.62
UBE2D4-209ENST00000454428 FBLL1A6NHQ2 334 aaKnown RBP11.16□□□□□ -0.62
UBE2D4-209ENST00000454428 NDUFB6O95139 128 aa11.16□□□□□ -0.62
UBE2D4-209ENST00000454428 DPPA3Q6W0C5 159 aa11.16□□□□□ -0.62
UBE2D4-209ENST00000454428 MIR17HGQ75NE6 70 aa11.16□□□□□ -0.62
UBE2D4-209ENST00000454428 FXYD5Q96DB9 178 aa11.16□□□□□ -0.62
UBE2D4-209ENST00000454428 PHYHIPLQ96FC7 376 aa11.16□□□□□ -0.62
UBE2D4-209ENST00000454428 NAGKQ9UJ70 344 aa11.16□□□□□ -0.62
UBE2D4-209ENST00000454428 TRBV6-4A0A1B0GX49 114 aa11.15□□□□□ -0.62
UBE2D4-209ENST00000454428 RBAKDNA6NC62 111 aa11.15□□□□□ -0.62
UBE2D4-209ENST00000454428 FAM24AA6NFZ4 105 aa11.15□□□□□ -0.62
UBE2D4-209ENST00000454428 CAV2P51636 162 aa11.15□□□□□ -0.62
UBE2D4-209ENST00000454428 BAXQ07812 192 aa11.15□□□□□ -0.62
UBE2D4-209ENST00000454428 RHOHQ15669 191 aa11.15□□□□□ -0.62
UBE2D4-209ENST00000454428 Q8N976 141 aa11.15□□□□□ -0.62
UBE2D4-209ENST00000454428 C20orf85Q9H1P6 137 aa11.15□□□□□ -0.62
UBE2D4-209ENST00000454428 TYMSP04818 313 aa11.14□□□□□ -0.63
UBE2D4-209ENST00000454428 CFAP126Q5VTH2 177 aa11.14□□□□□ -0.63
UBE2D4-209ENST00000454428 ATP6V0E2Q8NHE4 81 aa11.14□□□□□ -0.63
UBE2D4-209ENST00000454428 PRADC1Q9BSG0 188 aa11.14□□□□□ -0.63
UBE2D4-209ENST00000454428 IGHV3-73A0A0B4J1V6 119 aa11.13□□□□□ -0.63
UBE2D4-209ENST00000454428 OR10J4P0C629 311 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms