RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 A0A1W2PQD3 144 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 hADV29S1A0JD25 119 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 LMO7DNF2Z398 122 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 INS-IGF2F8WCM5 200 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 M0R135 149 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 CCL24O00175 119 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 PEX7O00628 323 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 CCL16O15467 120 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 BCE1O60756 84 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 FSTL3O95633 263 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 PYYP10082 97 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 GP1BBP13224 206 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 CD59P13987 128 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 EDDM3BP56851 147 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 HILS1P60008 231 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 MRPS36P82909 103 aaKnown RBP2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 RPL18AQ02543 176 aaKnown RBP2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 ERCC8Q13216 396 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 TWIST1Q15672 202 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 FAM201AQ5SY85 155 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 MIC13Q5XKP0 118 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 C22orf39Q6P5X5 142 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 CD164L2Q6UWJ8 174 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 LINC00596Q86U02 117 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 ZNF329Q86UD4 541 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 GTSCR1Q86UQ5 136 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 PRR15Q8IV56 129 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 STHQ8IWL8 128 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 RAB42Q8N4Z0 105 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 COX14Q96I36 57 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 C17orf77Q96MU5 243 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 METTL26Q96S19 204 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 DSCR8Q96T75 97 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 TTTY13Q9BZ97 58 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 SLC25A15Q9Y619 301 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 MYO9BQ13459 2157 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 IGLV2-18A0A075B6J9 118 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 TRBV7-6A0A0J9YX20 115 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 TEX49A0A1B0GTD5 131 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 A0A1B0GUT8 65 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 BUB3O43684 328 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 SCRG1O75711 98 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 IGHV3-33P01772 117 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 CLPSP04118 112 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 PLNP26678 52 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 FCER1GP30273 86 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 IFI27P40305 119 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 LEPP41159 167 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 ZNF138P52744 262 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 CRIP2P52943 208 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 UBE2L3P68036 154 aaKnown RBP2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 ATXN8Q156A1 80 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 FAM104BQ5XKR9 115 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 LINC00322Q6ZN03 302 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 COX8CQ7Z4L0 72 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 LINC01561Q8N1V8 128 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 DAND5Q8N907 189 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 NRACQ8N912 160 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 OR8A1Q8NGG7 326 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 WFDC5Q8TCV5 224 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 SMCR5Q8TEV8 140 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 NABP1Q96AH0 204 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 HIST1H4GQ99525 98 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 RTL8AQ9BWD3 113 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 SRXN1Q9BYN0 137 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 HEATR1Q9H583 2144 aaKnown RBP2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 RPUSD1Q9UJJ7 312 aaKnown RBP2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 PKIGQ9Y2B9 76 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 MYOFQ9NZM1 2061 aa2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 TET2Q6N021 2002 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P8-201ENST00000449709 GOLGA4Q13439 2230 aaKnown RBP2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 TRBV7-1A0A0A6YYK4 115 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 PGPA6NDG6 321 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 C17orf98A8MV24 154 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 H7C1H1 209 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 K7EMI3 77 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 CXCL13O43927 109 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 SS18L1O75177 396 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 IGHV3-30P01768 117 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 CFC1BP0CG36 223 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 CFC1P0CG37 223 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 IGHV3-30-5P0DP03 117 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 CD24P25063 80 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 FGF12P61328 243 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 RIGQ13278 110 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 PIGYQ3MUY2 71 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 VMA21Q3ZAQ7 101 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 C10orf128Q5T292 105 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 MIR17HGQ75NE6 70 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 FLVCR1-AS1Q8TAF5 88 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 DCANP1Q8TF63 244 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 TMEM263Q8WUH6 116 aaKnown RBP2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 FMC1Q96HJ9 113 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 ZNF714Q96N38 554 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 CNFNQ9BYD5 112 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 RNF7Q9UBF6 113 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 LAMTOR3Q9UHA4 124 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 PRO1854Q9UHT4 67 aa2.72□□□□□ -1.97
HMGB3P8-201ENST00000449709 TET1Q8NFU7 2136 aa2.71□□□□□ -1.98
HMGB3P8-201ENST00000449709 TRAV26-2A0A0B4J265 109 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms