RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 LINC01587Q99440 93 aa6.69□□□□□ -1.34
RFX3-207ENST00000449190 RARRES2Q99969 163 aa6.69□□□□□ -1.34
RFX3-207ENST00000449190 C20orf144Q9BQM9 153 aa6.69□□□□□ -1.34
RFX3-207ENST00000449190 OVOL2Q9BRP0 275 aa6.69□□□□□ -1.34
RFX3-207ENST00000449190 NIPSNAP3BQ9BS92 247 aa6.69□□□□□ -1.34
RFX3-207ENST00000449190 TREM1Q9NP99 234 aa6.69□□□□□ -1.34
RFX3-207ENST00000449190 MED9Q9NWA0 146 aa6.69□□□□□ -1.34
RFX3-207ENST00000449190 TRAV12-2A0A075B6T6 113 aa6.68□□□□□ -1.34
RFX3-207ENST00000449190 TRAV8-1A0A0A6YYK1 113 aa6.68□□□□□ -1.34
RFX3-207ENST00000449190 TRAV34A0A0B4J273 112 aa6.68□□□□□ -1.34
RFX3-207ENST00000449190 LOC102723971A0A1B0GUV8 181 aa6.68□□□□□ -1.34
RFX3-207ENST00000449190 C7orf71A4D174 169 aa6.68□□□□□ -1.34
RFX3-207ENST00000449190 GIG44P09565 113 aaPredicted RBP6.68□□□□□ -1.34
RFX3-207ENST00000449190 CRISP2P16562 243 aa6.68□□□□□ -1.34
RFX3-207ENST00000449190 Q8TAT8 98 aa6.68□□□□□ -1.34
RFX3-207ENST00000449190 PCNPQ8WW12 178 aaKnown RBP6.68□□□□□ -1.34
RFX3-207ENST00000449190 SGK494Q96LW2 274 aa6.68□□□□□ -1.34
RFX3-207ENST00000449190 LINC00479Q96M42 142 aa6.68□□□□□ -1.34
RFX3-207ENST00000449190 RETNQ9HD89 108 aa6.68□□□□□ -1.34
RFX3-207ENST00000449190 ZFP30Q9Y2G7 519 aa6.68□□□□□ -1.34
RFX3-207ENST00000449190 TRAV12-3A0A0B4J271 114 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 TRBV6-1A0A0K0K1D8 114 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 SMIM9A6NGZ8 99 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 PEA15Q15121 130 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 TMEM183BQ1AE95 376 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 SMUG1Q53HV7 270 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 TOR2AQ5JU69 321 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 ZNF506Q5JVG8 444 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 CASC10Q5T4H9 136 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 GFI1BQ5VTD9 330 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 CSNK1G2-AS1Q8NCQ2 148 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 FAM19A4Q96LR4 140 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 FAM210AQ96ND0 272 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 KLF12Q9Y4X4 402 aa6.67□□□□□ -1.34
RFX3-207ENST00000449190 TRAV21A0A0B4J279 112 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 KLLNB2CW77 178 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 H7BYZ3 331 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 CRXO43186 299 aaPredicted RBP6.66□□□□□ -1.34
RFX3-207ENST00000449190 MIFP14174 115 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 HTN1P15515 57 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 CEBPGP53567 150 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 TAS2R60P59551 318 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 BTN1A1Q13410 526 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 RRN3P1Q2M238 152 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 CLLU1Q5K131 121 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 BAGE2Q86Y30 109 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 C1orf158Q8N1D5 194 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 ZFAND2AQ8N6M9 145 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 C11orf52Q96A22 123 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 NEU1Q99519 415 aa6.66□□□□□ -1.34
RFX3-207ENST00000449190 DNAH9Q9NYC9 4486 aa6.65□□□□□ -1.34
RFX3-207ENST00000449190 TMEM189A5PLL7 270 aa6.65□□□□□ -1.34
RFX3-207ENST00000449190 TMEM250H0YL14 139 aa6.65□□□□□ -1.34
RFX3-207ENST00000449190 RGS13O14921 159 aa6.65□□□□□ -1.34
RFX3-207ENST00000449190 NDUFS6O75380 124 aaKnown RBP6.65□□□□□ -1.34
RFX3-207ENST00000449190 IGLV2-11P01706 119 aa6.65□□□□□ -1.34
RFX3-207ENST00000449190 RPL35P42766 123 aaKnown RBP6.65□□□□□ -1.34
RFX3-207ENST00000449190 IFITM2Q01629 132 aa6.65□□□□□ -1.34
RFX3-207ENST00000449190 ZNF705AQ6ZN79 300 aaPredicted RBP6.65□□□□□ -1.34
RFX3-207ENST00000449190 Q86TA4 180 aa6.65□□□□□ -1.34
RFX3-207ENST00000449190 C2CD4CQ8TF44 421 aa6.65□□□□□ -1.34
RFX3-207ENST00000449190 PYGO2Q9BRQ0 406 aa6.65□□□□□ -1.34
RFX3-207ENST00000449190 SMDT1Q9H4I9 107 aa6.65□□□□□ -1.34
RFX3-207ENST00000449190 CBY3A6NI87 242 aa6.64□□□□□ -1.35
RFX3-207ENST00000449190 FABP5P3A8MUU1 101 aa6.64□□□□□ -1.35
RFX3-207ENST00000449190 ZNF705GA8MUZ8 300 aaPredicted RBP6.64□□□□□ -1.35
RFX3-207ENST00000449190 ZNF324O75467 553 aaPredicted RBP6.64□□□□□ -1.35
RFX3-207ENST00000449190 GCGP01275 180 aa6.64□□□□□ -1.35
RFX3-207ENST00000449190 LTAP01374 205 aa6.64□□□□□ -1.35
RFX3-207ENST00000449190 GNG4P50150 75 aa6.64□□□□□ -1.35
RFX3-207ENST00000449190 KIR3DS1Q14943 382 aa6.64□□□□□ -1.35
RFX3-207ENST00000449190 ZNF674Q2M3X9 581 aa6.64□□□□□ -1.35
RFX3-207ENST00000449190 FAM159AQ6UWV7 190 aa6.64□□□□□ -1.35
RFX3-207ENST00000449190 TVP23CQ96ET8 276 aa6.64□□□□□ -1.35
RFX3-207ENST00000449190 BIN3Q9NQY0 253 aa6.64□□□□□ -1.35
RFX3-207ENST00000449190 NBEAL2Q6ZNJ1 2754 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 IGHV1OR15-1A0A075B7D0 117 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 IGHV4-28A0A0C4DH34 117 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 RAB19A4D1S5 217 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 FAM162BQ5T6X4 162 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 PRR9Q5T870 116 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 Q6AWC8 147 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 ZFAND6Q6FIF0 208 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 ZNF493Q6ZR52 646 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 TMEM183AQ8IXX5 376 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 EIF4E3Q8N5X7 224 aaKnown RBP6.63□□□□□ -1.35
RFX3-207ENST00000449190 DAZAP1Q96EP5 407 aaKnown RBP6.63□□□□□ -1.35
RFX3-207ENST00000449190 KCNS1Q96KK3 526 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 C8orf49Q96NF6 230 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 LINC00467Q9BRT7 94 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 KRTAP4-9Q9BYQ8 210 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 NAGKQ9UJ70 344 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 X6R8D5 127 aa6.63□□□□□ -1.35
RFX3-207ENST00000449190 TRGV11A0A075B6L2 103 aa6.62□□□□□ -1.35
RFX3-207ENST00000449190 A0A0J9YWU9 116 aa6.62□□□□□ -1.35
RFX3-207ENST00000449190 ORM1P02763 201 aa6.62□□□□□ -1.35
RFX3-207ENST00000449190 PFN1P07737 140 aaKnown RBP6.62□□□□□ -1.35
RFX3-207ENST00000449190 SRP19P09132 144 aaKnown RBP6.62□□□□□ -1.35
RFX3-207ENST00000449190 RBMY1A1P0DJD3 496 aaKnown RBP6.62□□□□□ -1.35
RFX3-207ENST00000449190 RBMY1CP0DJD4 496 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms