RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 SRD5A3Q9H8P0 318 aa10.73□□□□□ -0.69
APP-210ENST00000448850 SDF2L1Q9HCN8 221 aa10.73□□□□□ -0.69
APP-210ENST00000448850 AURKAIP1Q9NWT8 199 aaPredicted RBP10.73□□□□□ -0.69
APP-210ENST00000448850 CARHSP1Q9Y2V2 147 aaKnown RBP10.73□□□□□ -0.69
APP-210ENST00000448850 CBY1Q9Y3M2 126 aa10.73□□□□□ -0.69
APP-210ENST00000448850 LEPP41159 167 aa10.72□□□□□ -0.69
APP-210ENST00000448850 KPRPQ5T749 579 aaPredicted RBP10.72□□□□□ -0.69
APP-210ENST00000448850 COX8CQ7Z4L0 72 aa10.72□□□□□ -0.69
APP-210ENST00000448850 LINC01551Q86U37 167 aa10.72□□□□□ -0.69
APP-210ENST00000448850 MGST1P10620 155 aaKnown RBP10.72□□□□□ -0.69
APP-210ENST00000448850 TSPOP30536 169 aa10.72□□□□□ -0.69
APP-210ENST00000448850 RPL23P62829 140 aaKnown RBP10.72□□□□□ -0.69
APP-210ENST00000448850 ZFAND2AQ8N6M9 145 aa10.72□□□□□ -0.69
APP-210ENST00000448850 ZC2HC1AQ96GY0 325 aa10.72□□□□□ -0.69
APP-210ENST00000448850 DNHD1Q96M86 4753 aa10.71□□□□□ -0.69
APP-210ENST00000448850 DNAH3Q8TD57 4116 aa10.71□□□□□ -0.69
APP-210ENST00000448850 K7EN84 100 aa10.71□□□□□ -0.69
APP-210ENST00000448850 GPX1P07203 203 aa10.71□□□□□ -0.69
APP-210ENST00000448850 CDKN1BP46527 198 aa10.71□□□□□ -0.69
APP-210ENST00000448850 SPINK13Q1W4C9 94 aa10.71□□□□□ -0.69
APP-210ENST00000448850 KLLNB2CW77 178 aa10.7□□□□□ -0.7
APP-210ENST00000448850 M0R2Z0 102 aa10.7□□□□□ -0.7
APP-210ENST00000448850 RPL35AP18077 110 aaKnown RBP10.7□□□□□ -0.7
APP-210ENST00000448850 FXYD7P58549 80 aa10.7□□□□□ -0.7
APP-210ENST00000448850 NUTF2P61970 127 aaKnown RBP10.7□□□□□ -0.7
APP-210ENST00000448850 PNRC1Q12796 327 aaPredicted RBP10.7□□□□□ -0.7
APP-210ENST00000448850 ADIRFQ15847 76 aa10.7□□□□□ -0.7
APP-210ENST00000448850 GCGP01275 180 aa10.7□□□□□ -0.7
APP-210ENST00000448850 APOC3P02656 99 aa10.7□□□□□ -0.7
APP-210ENST00000448850 OR5I1Q13606 314 aa10.7□□□□□ -0.7
APP-210ENST00000448850 KIR3DS1Q14943 382 aa10.7□□□□□ -0.7
APP-210ENST00000448850 PRR9Q5T870 116 aa10.7□□□□□ -0.7
APP-210ENST00000448850 TUBA4BQ9H853 241 aa10.7□□□□□ -0.7
APP-210ENST00000448850 BIN3Q9NQY0 253 aa10.7□□□□□ -0.7
APP-210ENST00000448850 IGHV4-30-4P0DP06 118 aa10.69□□□□□ -0.7
APP-210ENST00000448850 ZNF80P51504 273 aaPredicted RBP10.69□□□□□ -0.7
APP-210ENST00000448850 PRR27Q6MZM9 219 aa10.69□□□□□ -0.7
APP-210ENST00000448850 MORN3Q6PF18 240 aaPredicted RBP10.69□□□□□ -0.7
APP-210ENST00000448850 TRAV12-2A0A075B6T6 113 aa10.68□□□□□ -0.7
APP-210ENST00000448850 LOC102724200A0A096LPH7 203 aaPredicted RBP10.68□□□□□ -0.7
APP-210ENST00000448850 RNASE4P34096 147 aaKnown RBP10.68□□□□□ -0.7
APP-210ENST00000448850 CRIP1P50238 77 aa10.68□□□□□ -0.7
APP-210ENST00000448850 BTN1A1Q13410 526 aa10.68□□□□□ -0.7
APP-210ENST00000448850 C7orf71A4D174 169 aa10.68□□□□□ -0.7
APP-210ENST00000448850 CRXO43186 299 aaPredicted RBP10.68□□□□□ -0.7
APP-210ENST00000448850 AMBPP02760 352 aa10.68□□□□□ -0.7
APP-210ENST00000448850 GFI1BQ5VTD9 330 aa10.68□□□□□ -0.7
APP-210ENST00000448850 LINC00322Q6ZN03 302 aaPredicted RBP10.68□□□□□ -0.7
APP-210ENST00000448850 ISOC2Q96AB3 205 aa10.68□□□□□ -0.7
APP-210ENST00000448850 FABP5P3A8MUU1 101 aa10.67□□□□□ -0.7
APP-210ENST00000448850 M0R036 132 aa10.67□□□□□ -0.7
APP-210ENST00000448850 PFN1P07737 140 aaKnown RBP10.67□□□□□ -0.7
APP-210ENST00000448850 COTL1Q14019 142 aa10.67□□□□□ -0.7
APP-210ENST00000448850 FAM162BQ5T6X4 162 aa10.67□□□□□ -0.7
APP-210ENST00000448850 Q6AWC8 147 aa10.67□□□□□ -0.7
APP-210ENST00000448850 XCL2Q9UBD3 114 aa10.67□□□□□ -0.7
APP-210ENST00000448850 TRAV12-3A0A0B4J271 114 aa10.66□□□□□ -0.7
APP-210ENST00000448850 C19orf71A6NCJ1 209 aa10.66□□□□□ -0.7
APP-210ENST00000448850 A8MZ25 164 aa10.66□□□□□ -0.7
APP-210ENST00000448850 SH2D1AO60880 128 aa10.66□□□□□ -0.7
APP-210ENST00000448850 PRB2P02812 416 aaPredicted RBP10.66□□□□□ -0.7
APP-210ENST00000448850 SVBPQ8N300 66 aa10.66□□□□□ -0.7
APP-210ENST00000448850 CSTL1Q9H114 145 aa10.66□□□□□ -0.7
APP-210ENST00000448850 TRAV21A0A0B4J279 112 aa10.65□□□□□ -0.7
APP-210ENST00000448850 GIG44P09565 113 aaPredicted RBP10.65□□□□□ -0.7
APP-210ENST00000448850 ERVFC1-1P60608 527 aa10.65□□□□□ -0.7
APP-210ENST00000448850 IBA57Q5T440 356 aaKnown RBP10.65□□□□□ -0.7
APP-210ENST00000448850 Q6ZQT7 251 aa10.65□□□□□ -0.7
APP-210ENST00000448850 FAM231DQ6ZW35 169 aa10.65□□□□□ -0.7
APP-210ENST00000448850 CLRN3Q8NCR9 226 aa10.65□□□□□ -0.7
APP-210ENST00000448850 DAZAP1Q96EP5 407 aaKnown RBP10.65□□□□□ -0.7
APP-210ENST00000448850 C1QTNF4Q9BXJ3 329 aa10.65□□□□□ -0.7
APP-210ENST00000448850 RNASE7Q9H1E1 156 aaKnown RBP10.65□□□□□ -0.7
APP-210ENST00000448850 KIR2DL5BA0A0G2JN68 375 aa10.65□□□□□ -0.71
APP-210ENST00000448850 KIR2DL5BA0A0G2JPC4 375 aa10.65□□□□□ -0.71
APP-210ENST00000448850 ZNF324O75467 553 aaPredicted RBP10.65□□□□□ -0.71
APP-210ENST00000448850 CA1P00915 261 aaPredicted RBP10.65□□□□□ -0.71
APP-210ENST00000448850 INSP01308 110 aa10.65□□□□□ -0.71
APP-210ENST00000448850 KIR2DL5AQ8N109 375 aa10.65□□□□□ -0.71
APP-210ENST00000448850 NUDT10Q8NFP7 164 aa10.65□□□□□ -0.71
APP-210ENST00000448850 KIR2DL5BQ8NHK3 375 aa10.65□□□□□ -0.71
APP-210ENST00000448850 NUDT11Q96G61 164 aa10.65□□□□□ -0.71
APP-210ENST00000448850 SFRP2Q96HF1 295 aa10.65□□□□□ -0.71
APP-210ENST00000448850 B4DEV8 164 aa10.64□□□□□ -0.71
APP-210ENST00000448850 SNAPINO95295 136 aa10.64□□□□□ -0.71
APP-210ENST00000448850 APOC4P55056 127 aa10.64□□□□□ -0.71
APP-210ENST00000448850 OSTCQ9NRP0 149 aa10.64□□□□□ -0.71
APP-210ENST00000448850 K7EIL1 84 aa10.63□□□□□ -0.71
APP-210ENST00000448850 P01737 135 aa10.63□□□□□ -0.71
APP-210ENST00000448850 RBMY1A1P0DJD3 496 aaKnown RBP10.63□□□□□ -0.71
APP-210ENST00000448850 RBMY1CP0DJD4 496 aa10.63□□□□□ -0.71
APP-210ENST00000448850 RBMY1FQ15415 496 aaKnown RBP10.63□□□□□ -0.71
APP-210ENST00000448850 C15orf54Q8N8G6 183 aa10.63□□□□□ -0.71
APP-210ENST00000448850 OR10G8Q8NGN5 311 aa10.63□□□□□ -0.71
APP-210ENST00000448850 C20orf144Q9BQM9 153 aa10.63□□□□□ -0.71
APP-210ENST00000448850 RNF212Q495C1 297 aa10.63□□□□□ -0.71
APP-210ENST00000448850 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
APP-210ENST00000448850 C7orf77A4D0Y5 90 aa10.62□□□□□ -0.71
APP-210ENST00000448850 GATCO43716 136 aaKnown RBP10.62□□□□□ -0.71
APP-210ENST00000448850 ORM1P02763 201 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms