RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 RPUSD1Q9UJJ7 312 aaKnown RBP8.32□□□□□ -1.08
LINC00342-202ENST00000448494 IGHV4-39P01824 125 aa8.32□□□□□ -1.08
LINC00342-202ENST00000448494 ELANEP08246 267 aa8.32□□□□□ -1.08
LINC00342-202ENST00000448494 LOXL3P58215 753 aa8.32□□□□□ -1.08
LINC00342-202ENST00000448494 CCL8P80075 99 aa8.32□□□□□ -1.08
LINC00342-202ENST00000448494 RPL39P5Q59GN2 51 aa8.32□□□□□ -1.08
LINC00342-202ENST00000448494 CYSTM1Q9H1C7 97 aa8.32□□□□□ -1.08
LINC00342-202ENST00000448494 TMEM14CQ9P0S9 112 aa8.32□□□□□ -1.08
LINC00342-202ENST00000448494 MUC6Q6W4X9 2439 aa8.32□□□□□ -1.08
LINC00342-202ENST00000448494 CHD7Q9P2D1 2997 aa8.31□□□□□ -1.08
LINC00342-202ENST00000448494 RP1P56715 2156 aa8.31□□□□□ -1.08
LINC00342-202ENST00000448494 EXOC3-AS1Q8N2X6 119 aa8.31□□□□□ -1.08
LINC00342-202ENST00000448494 UPK3BQ9BT76 320 aa8.31□□□□□ -1.08
LINC00342-202ENST00000448494 PIEZO1Q92508 2521 aa8.31□□□□□ -1.08
LINC00342-202ENST00000448494 NDUFC2-KCTD14E9PQ53 114 aa8.3□□□□□ -1.08
LINC00342-202ENST00000448494 PSMB8P28062 276 aa8.3□□□□□ -1.08
LINC00342-202ENST00000448494 ERHP84090 104 aaKnown RBP8.3□□□□□ -1.08
LINC00342-202ENST00000448494 PRIMA1Q86XR5 153 aa8.3□□□□□ -1.08
LINC00342-202ENST00000448494 NEXN-AS1Q8NBZ9 246 aa8.3□□□□□ -1.08
LINC00342-202ENST00000448494 PRR7Q8TB68 274 aa8.3□□□□□ -1.08
LINC00342-202ENST00000448494 DPH3P1Q9H4G8 78 aa8.3□□□□□ -1.08
LINC00342-202ENST00000448494 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.3□□□□□ -1.08
LINC00342-202ENST00000448494 C1orf195Q5TG92 126 aa8.3□□□□□ -1.08
LINC00342-202ENST00000448494 WDR86Q86TI4 376 aa8.3□□□□□ -1.08
LINC00342-202ENST00000448494 CNFNQ9BYD5 112 aa8.3□□□□□ -1.08
LINC00342-202ENST00000448494 SRXN1Q9BYN0 137 aa8.3□□□□□ -1.08
LINC00342-202ENST00000448494 GNG12Q9UBI6 72 aa8.3□□□□□ -1.08
LINC00342-202ENST00000448494 TRAV41A0A0B4J266 112 aa8.29□□□□□ -1.08
LINC00342-202ENST00000448494 IGHV3-20A0A0C4DH32 117 aa8.29□□□□□ -1.08
LINC00342-202ENST00000448494 SPINK2P20155 84 aa8.29□□□□□ -1.08
LINC00342-202ENST00000448494 SERP2Q8N6R1 65 aa8.29□□□□□ -1.08
LINC00342-202ENST00000448494 RNF152Q8N8N0 203 aa8.29□□□□□ -1.08
LINC00342-202ENST00000448494 MBD3L2Q8NHZ7 208 aaPredicted RBP8.29□□□□□ -1.08
LINC00342-202ENST00000448494 KNTC1P50748 2209 aa8.29□□□□□ -1.08
LINC00342-202ENST00000448494 MYO7AQ13402 2215 aa8.28□□□□□ -1.08
LINC00342-202ENST00000448494 EPM2AB3EWF7 344 aa8.28□□□□□ -1.08
LINC00342-202ENST00000448494 NXPH1P58417 271 aa8.28□□□□□ -1.08
LINC00342-202ENST00000448494 Q1RN00 199 aa8.28□□□□□ -1.08
LINC00342-202ENST00000448494 GUSBP11Q6P575 273 aa8.28□□□□□ -1.08
LINC00342-202ENST00000448494 COX8CQ7Z4L0 72 aa8.28□□□□□ -1.08
LINC00342-202ENST00000448494 SMCR5Q8TEV8 140 aa8.28□□□□□ -1.08
LINC00342-202ENST00000448494 CABIN1Q9Y6J0 2220 aa8.28□□□□□ -1.08
LINC00342-202ENST00000448494 IGHV5-51A0A0C4DH38 117 aa8.28□□□□□ -1.08
LINC00342-202ENST00000448494 H3BTX0 84 aa8.28□□□□□ -1.08
LINC00342-202ENST00000448494 SH2D1AO60880 128 aa8.28□□□□□ -1.08
LINC00342-202ENST00000448494 RPL18AQ02543 176 aaKnown RBP8.28□□□□□ -1.08
LINC00342-202ENST00000448494 LYPD1Q8N2G4 141 aa8.28□□□□□ -1.08
LINC00342-202ENST00000448494 TRANK1O15050 2925 aa8.27□□□□□ -1.08
LINC00342-202ENST00000448494 IGHV1-45A0A0A0MS14 117 aa8.27□□□□□ -1.09
LINC00342-202ENST00000448494 GAS8-AS1O95177 125 aa8.27□□□□□ -1.09
LINC00342-202ENST00000448494 PAPPA-AS1Q5QFB9 102 aa8.27□□□□□ -1.09
LINC00342-202ENST00000448494 EIF4EBP3O60516 100 aaPredicted RBP8.27□□□□□ -1.09
LINC00342-202ENST00000448494 CD40P25942 277 aa8.27□□□□□ -1.09
LINC00342-202ENST00000448494 DEFB103AP81534 67 aa8.27□□□□□ -1.09
LINC00342-202ENST00000448494 Q6ZS46 218 aa8.27□□□□□ -1.09
LINC00342-202ENST00000448494 KLHL30-AS1Q8NEE0 82 aa8.27□□□□□ -1.09
LINC00342-202ENST00000448494 NDUFA4L2Q9NRX3 87 aa8.27□□□□□ -1.09
LINC00342-202ENST00000448494 PEMTQ9UBM1 199 aa8.27□□□□□ -1.09
LINC00342-202ENST00000448494 SSUH2Q9Y2M2 353 aa8.27□□□□□ -1.09
LINC00342-202ENST00000448494 NOTCH4Q99466 2003 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 XIRP2A4UGR9 3374 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 FAM236DA0A1B0GTK5 79 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 FAM236CP0DP71 79 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 PLGLAQ15195 96 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 C17orf82Q86X59 251 aaPredicted RBP8.26□□□□□ -1.09
LINC00342-202ENST00000448494 TOMM6Q96B49 74 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 TRIAP1O43715 76 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 DKK1O94907 266 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 COX6CP09669 75 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 C3orf36Q3SXR2 165 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 Q6ZT83 130 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 LINC00311Q8N616 119 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 C10orf105Q8TEF2 133 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 C8orf49Q96NF6 230 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 TPSG1Q9NRR2 321 aa8.26□□□□□ -1.09
LINC00342-202ENST00000448494 TRBV7-1A0A0A6YYK4 115 aa8.25□□□□□ -1.09
LINC00342-202ENST00000448494 H7C2G1 150 aa8.25□□□□□ -1.09
LINC00342-202ENST00000448494 NPC2P61916 151 aa8.25□□□□□ -1.09
LINC00342-202ENST00000448494 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.25□□□□□ -1.09
LINC00342-202ENST00000448494 C20orf173Q96LM9 149 aa8.25□□□□□ -1.09
LINC00342-202ENST00000448494 CTSZQ9UBR2 303 aa8.25□□□□□ -1.09
LINC00342-202ENST00000448494 TRAV12-2A0A075B6T6 113 aa8.25□□□□□ -1.09
LINC00342-202ENST00000448494 TMEM223A0PJW6 202 aa8.25□□□□□ -1.09
LINC00342-202ENST00000448494 NDUFC2O95298 119 aa8.25□□□□□ -1.09
LINC00342-202ENST00000448494 GATA1P15976 413 aaPredicted RBP8.25□□□□□ -1.09
LINC00342-202ENST00000448494 HOXA4Q00056 320 aaPredicted RBP8.25□□□□□ -1.09
LINC00342-202ENST00000448494 ORMDL2Q53FV1 153 aa8.25□□□□□ -1.09
LINC00342-202ENST00000448494 C6orf226Q5I0X4 101 aa8.25□□□□□ -1.09
LINC00342-202ENST00000448494 IL17RELQ6ZVW7 336 aa8.25□□□□□ -1.09
LINC00342-202ENST00000448494 KLF14Q8TD94 323 aaPredicted RBP8.25□□□□□ -1.09
LINC00342-202ENST00000448494 DYNLRB1Q9NP97 96 aa8.25□□□□□ -1.09
LINC00342-202ENST00000448494 ZNF318Q5VUA4 2279 aa8.24□□□□□ -1.09
LINC00342-202ENST00000448494 NBR2O15453 112 aa8.24□□□□□ -1.09
LINC00342-202ENST00000448494 LIFP15018 202 aa8.24□□□□□ -1.09
LINC00342-202ENST00000448494 C1orf229Q6ZS94 237 aaPredicted RBP8.24□□□□□ -1.09
LINC00342-202ENST00000448494 NRACQ8N912 160 aa8.24□□□□□ -1.09
LINC00342-202ENST00000448494 TRBV19A0A075B6N1 114 aa8.24□□□□□ -1.09
LINC00342-202ENST00000448494 LST1O00453 97 aa8.24□□□□□ -1.09
LINC00342-202ENST00000448494 GFERP55789 205 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms