RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 XCL2Q9UBD3 114 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 UQCR10Q9UDW1 63 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 IGKV1-9A0A0C4DH69 117 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 RNF222A6NCQ9 220 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 H3BQ15 152 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 TNFRSF11BO00300 401 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 GEMIN2O14893 280 aaKnown RBP3.17□□□□□ -1.9
SDCBP-205ENST00000447267 HMGB3O15347 200 aaKnown RBP3.17□□□□□ -1.9
SDCBP-205ENST00000447267 SRSF10O75494 262 aaKnown RBP3.17□□□□□ -1.9
SDCBP-205ENST00000447267 HBZP02008 142 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 ORM1P02763 201 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 IL5P05113 134 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 ISG15P05161 165 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 CXCL1P09341 107 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 OR9G9P0C7N8 305 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 IGLC1P0CG04 106 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 SAA2P0DJI9 122 aaPredicted RBP3.17□□□□□ -1.9
SDCBP-205ENST00000447267 CT45A6P0DMU7 189 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 CT45A5P0DMU8 189 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 CT45A7P0DMV0 189 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 GNB3P16520 340 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 CMC4P56277 68 aaPredicted RBP3.17□□□□□ -1.9
SDCBP-205ENST00000447267 PPP1R8Q12972 351 aaKnown RBP3.17□□□□□ -1.9
SDCBP-205ENST00000447267 ELOBQ15370 118 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 IAH1Q2TAA2 248 aaPredicted RBP3.17□□□□□ -1.9
SDCBP-205ENST00000447267 ACOT6Q3I5F7 207 aaPredicted RBP3.17□□□□□ -1.9
SDCBP-205ENST00000447267 PAPPA-AS1Q5QFB9 102 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 GLT8D1Q68CQ7 371 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 GLDNQ6ZMI3 551 aaPredicted RBP3.17□□□□□ -1.9
SDCBP-205ENST00000447267 H2BFWTQ7Z2G1 175 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 SAXO1Q8IYX7 474 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 OR1L4Q8NGR5 311 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 OTOSQ8NHW6 89 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 VN1R17PQ8TDU5 208 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 Q8WTZ3 238 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 BORCS8Q96FH0 119 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 SMIM3Q9BZL3 60 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 FUT9Q9Y231 359 aa3.17□□□□□ -1.9
SDCBP-205ENST00000447267 YTHDF2Q9Y5A9 579 aaKnown RBP3.17□□□□□ -1.9
SDCBP-205ENST00000447267 A0A087WWC5 75 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 A0A1W2PRE2 83 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 A0A1W2PS18 150 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 TMEM189A5PLL7 270 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 B4DEV8 164 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 C9JQL5 133 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 K7EN84 100 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 K7EPK0 472 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 TAX1BP3O14907 124 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 CREBL2O60519 120 aaPredicted RBP3.16□□□□□ -1.9
SDCBP-205ENST00000447267 IGKV1-16P04430 117 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 DEFB130BP0DP73 79 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 DEFB130AP0DP74 79 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 TPT1P13693 172 aaKnown RBP3.16□□□□□ -1.9
SDCBP-205ENST00000447267 MYOD1P15172 320 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 ATF1P18846 271 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 CELP19835 753 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 CCL1P22362 96 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 HINT1P49773 126 aaPredicted RBP3.16□□□□□ -1.9
SDCBP-205ENST00000447267 GNG4P50150 75 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 TCL1AP56279 114 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 RHOBP62745 196 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 HIST1H1AQ02539 215 aaPredicted RBP3.16□□□□□ -1.9
SDCBP-205ENST00000447267 WFDC2Q14508 124 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 FAM162BQ5T6X4 162 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 TMEM78Q5T7P6 136 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 AMMECR1LQ6DCA0 310 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 Q6ZN92 141 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 OR2T33Q8NG76 320 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 OR4B1Q8NGF8 309 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 THEM6Q8WUY1 208 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 SECTM1Q8WVN6 248 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 TMEM190Q8WZ59 177 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 FGGYQ96C11 551 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 ACY3Q96HD9 319 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 DNAJC30Q96LL9 226 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 RNF5Q99942 180 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 ANAPC13Q9BS18 74 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 PAXXQ9BUH6 204 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 PECRQ9BY49 303 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 IFI27L2Q9H2X8 130 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 SPANXA1Q9NS26 97 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 NDUFB11Q9NX14 153 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 OR1A1Q9P1Q5 309 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 GNG12Q9UBI6 72 aa3.16□□□□□ -1.9
SDCBP-205ENST00000447267 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
SDCBP-205ENST00000447267 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.15□□□□□ -1.91
SDCBP-205ENST00000447267 IGHV3-49A0A0A0MS15 119 aa3.15□□□□□ -1.91
SDCBP-205ENST00000447267 TRAV14DV4A0A0A6YYC5 116 aa3.15□□□□□ -1.91
SDCBP-205ENST00000447267 A0A0B4J2A0 478 aa3.15□□□□□ -1.91
SDCBP-205ENST00000447267 A0A0J9YY99 117 aa3.15□□□□□ -1.91
SDCBP-205ENST00000447267 TEX48A0A1B0GUV7 120 aa3.15□□□□□ -1.91
SDCBP-205ENST00000447267 IGLC7A0M8Q6 106 aa3.15□□□□□ -1.91
SDCBP-205ENST00000447267 MAP1LC3B2A6NCE7 125 aa3.15□□□□□ -1.91
SDCBP-205ENST00000447267 UMAD1C9J7I0 102 aa3.15□□□□□ -1.91
SDCBP-205ENST00000447267 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.15□□□□□ -1.91
SDCBP-205ENST00000447267 FXYD1O00168 92 aa3.15□□□□□ -1.91
SDCBP-205ENST00000447267 GNGT2O14610 69 aa3.15□□□□□ -1.91
SDCBP-205ENST00000447267 PSCAO43653 123 aa3.15□□□□□ -1.91
SDCBP-205ENST00000447267 YPEL1O60688 119 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms