RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	LINC01619	G3V211	115 aa		5.29	□□□□□ -1.56
TRIM6-205	ENST00000445329	MIR17HG	Q75NE6	70 aa		5.29	□□□□□ -1.56
TRIM6-205	ENST00000445329	LINC00643	Q86TS7	51 aa		5.29	□□□□□ -1.56
TRIM6-205	ENST00000445329	HES7	Q9BYE0	225 aa		5.29	□□□□□ -1.56
TRIM6-205	ENST00000445329	ZMAT4	Q9H898	229 aa		5.29	□□□□□ -1.56
TRIM6-205	ENST00000445329	IGHV5-51	A0A0C4DH38	117 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	TEX22	C9J3V5	150 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329		H7C2G1	150 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	HOXB4	P17483	251 aa	Predicted RBP	5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	DUT	P33316	252 aa	Known RBP	5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	ATXN8	Q156A1	80 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	ORMDL2	Q53FV1	153 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	FAM201A	Q5SY85	155 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	FAM90A1	Q86YD7	464 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	METTL26	Q96S19	204 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	TMEM243	Q9BU79	118 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	ADAMTS20	P59510	1910 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	TRBV10-2	A0A0K0K1G8	114 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	NGF	P01138	241 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	CRYGS	P22914	178 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	SCGB1D4	Q6XE38	83 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	MKX	Q8IYA7	352 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	PAX4	O43316	350 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	SPRY2	O43597	315 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	DLX1	P56177	255 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	FHL2	Q14192	279 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	DEFB110	Q30KQ9	67 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	VN1R4	Q7Z5H5	301 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	SMCR5	Q8TEV8	140 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	EEF1AKMT3	Q96AZ1	226 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	FOXB1	Q99853	325 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	COL5A1	P20908	1838 aa	Predicted RBP	5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	CFAP47	Q6ZTR5	3102 aa		5.28	□□□□□ -1.56
TRIM6-205	ENST00000445329	CXCL5	P42830	114 aa		5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	RPL18A	Q02543	176 aa	Known RBP	5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	C9orf139	Q6ZV77	190 aa		5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	GVINP1	Q7Z2Y8	2422 aa		5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	PRSS12	P56730	875 aa		5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	SNRPD3	P62318	126 aa	Known RBP	5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	DAZ2	Q13117	558 aa	Known RBP	5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	DAZ4	Q86SG3	579 aa	Known RBP	5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	C5orf38	Q86SI9	138 aa		5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	FAM223A	Q8IWN6	122 aa		5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	PRSS22	Q9GZN4	317 aa		5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	DAZ1	Q9NQZ3	744 aa	Known RBP	5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	DAZ3	Q9NR90	486 aa	Known RBP	5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	RNF7	Q9UBF6	113 aa		5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	FAM186A	A6NE01	2351 aa		5.27	□□□□□ -1.57
TRIM6-205	ENST00000445329	INTS1	Q8N201	2190 aa	Known RBP	5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329		A0A0G2JNJ9	132 aa		5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329	KNCN	A6PVL3	124 aa		5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329	EPM2A	B3EWF7	344 aa		5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329		D6R8Y8	96 aa		5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329		H0YGG7	62 aa		5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329	RNASE2	P10153	161 aa	Known RBP	5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329	GRN	P28799	593 aa	Known RBP	5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329		Q9UFV3	132 aa		5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329	IGHV5-10-1	A0A0J9YXX1	117 aa		5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329	UPK2	O00526	184 aa		5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329	NTN3	O00634	580 aa	Predicted RBP	5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329	NDUFA3	O95167	84 aa		5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329	HIST1H4A	P62805	103 aa	Known RBP	5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329	PRO1854	Q9UHT4	67 aa		5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329	FER1L5	A0AVI2	2057 aa		5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329	PTPRZ1	P23471	2315 aa	Predicted RBP	5.26	□□□□□ -1.57
TRIM6-205	ENST00000445329	NDUFC2-KCTD14	E9PQ53	114 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	IGKV1D-16	P01601	117 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	ACYP1	P07311	99 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	CFC1B	P0CG36	223 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	CFC1	P0CG37	223 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329		Q1RN00	199 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	FAM104B	Q5XKR9	115 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	ZNF799	Q96GE5	643 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	MRPL35	Q9NZE8	188 aa	Known RBP	5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	LINC00474	Q9P2X8	69 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	CEP250	Q9BV73	2442 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	SEC16A	O15027	2179 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	TRBV7-1	A0A0A6YYK4	115 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	IQCF6	A8MYZ5	107 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	UBE2E1	P51965	193 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	FGF12	P61328	243 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	DEFB124	Q8NES8	71 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	UBE2E2	Q96LR5	201 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	CNOT1	A5YKK6	2376 aa	Known RBP	5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	WT1	P19544	449 aa	Predicted RBP	5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	HILS1	P60008	231 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	AKAP13	Q12802	2813 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	NNAT	Q16517	81 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	FRY	Q5TBA9	3013 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	C1orf158	Q8N1D5	194 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	ZNF714	Q96N38	554 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	C7orf69	Q9H7B7	122 aa		5.25	□□□□□ -1.57
TRIM6-205	ENST00000445329	LOC400499	M0QZD8	3231 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	IGKV1D-43	A0A0B4J1Z2	117 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	ZNF815P	A8K554	130 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	TIMM17B	O60830	172 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329		P0DMU3	169 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	FAM231A	P0DMU4	169 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	FAM231C	P0DMU5	169 aa		5.24	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 154 ms