RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 PRR9Q5T870 116 aa13.14□□□□□ -0.31
PTX4-202ENST00000440447 PYGO2Q9BRQ0 406 aa13.14□□□□□ -0.31
PTX4-202ENST00000440447 TREM1Q9NP99 234 aa13.14□□□□□ -0.31
PTX4-202ENST00000440447 PRNTQ86SH4 94 aa13.13□□□□□ -0.31
PTX4-202ENST00000440447 LINC00479Q96M42 142 aa13.13□□□□□ -0.31
PTX4-202ENST00000440447 DNAH7Q8WXX0 4024 aa13.12□□□□□ -0.31
PTX4-202ENST00000440447 TRAV34A0A0B4J273 112 aa13.12□□□□□ -0.31
PTX4-202ENST00000440447 CXorf65A6NEN9 183 aa13.12□□□□□ -0.31
PTX4-202ENST00000440447 C11orf94C9JXX5 98 aa13.12□□□□□ -0.31
PTX4-202ENST00000440447 IFNA1P01562 189 aa13.12□□□□□ -0.31
PTX4-202ENST00000440447 IGLV2-11P01706 119 aa13.12□□□□□ -0.31
PTX4-202ENST00000440447 AZU1P20160 251 aa13.12□□□□□ -0.31
PTX4-202ENST00000440447 ZNF493Q6ZR52 646 aa13.12□□□□□ -0.31
PTX4-202ENST00000440447 TVP23CQ96ET8 276 aa13.12□□□□□ -0.31
PTX4-202ENST00000440447 SPART-AS1P0CW21 52 aa13.11□□□□□ -0.31
PTX4-202ENST00000440447 NANOS2P60321 138 aaKnown RBP13.11□□□□□ -0.31
PTX4-202ENST00000440447 SAPCD1Q5SSQ6 148 aa13.11□□□□□ -0.31
PTX4-202ENST00000440447 ZFAND6Q6FIF0 208 aa13.11□□□□□ -0.31
PTX4-202ENST00000440447 C16orf74Q96GX8 76 aa13.11□□□□□ -0.31
PTX4-202ENST00000440447 TEX48A0A1B0GUV7 120 aa13.1□□□□□ -0.31
PTX4-202ENST00000440447 RGS13O14921 159 aa13.1□□□□□ -0.31
PTX4-202ENST00000440447 AKR1C3P42330 323 aa13.1□□□□□ -0.31
PTX4-202ENST00000440447 UBE2G1P62253 170 aa13.1□□□□□ -0.31
PTX4-202ENST00000440447 PMS2P11Q13670 270 aa13.1□□□□□ -0.31
PTX4-202ENST00000440447 Q6AWC8 147 aa13.1□□□□□ -0.31
PTX4-202ENST00000440447 TMEM263Q8WUH6 116 aaKnown RBP13.1□□□□□ -0.31
PTX4-202ENST00000440447 TXNDC17Q9BRA2 123 aa13.1□□□□□ -0.31
PTX4-202ENST00000440447 LINC00467Q9BRT7 94 aa13.1□□□□□ -0.31
PTX4-202ENST00000440447 CELA1Q9UNI1 258 aa13.1□□□□□ -0.31
PTX4-202ENST00000440447 IGHV1OR15-1A0A075B7D0 117 aa13.09□□□□□ -0.31
PTX4-202ENST00000440447 Q6ZQT7 251 aa13.09□□□□□ -0.31
PTX4-202ENST00000440447 EIF4E3Q8N5X7 224 aaKnown RBP13.09□□□□□ -0.31
PTX4-202ENST00000440447 FMC1Q96HJ9 113 aa13.09□□□□□ -0.31
PTX4-202ENST00000440447 DKK2Q9UBU2 259 aa13.09□□□□□ -0.31
PTX4-202ENST00000440447 KLF12Q9Y4X4 402 aa13.09□□□□□ -0.31
PTX4-202ENST00000440447 TRAV21A0A0B4J279 112 aa13.08□□□□□ -0.32
PTX4-202ENST00000440447 SCO2A0A1W2PP80 73 aa13.08□□□□□ -0.32
PTX4-202ENST00000440447 CBY3A6NI87 242 aa13.08□□□□□ -0.32
PTX4-202ENST00000440447 SMUG1Q53HV7 270 aa13.08□□□□□ -0.32
PTX4-202ENST00000440447 FAM222AQ5U5X8 452 aa13.08□□□□□ -0.32
PTX4-202ENST00000440447 Q86TA4 180 aa13.08□□□□□ -0.32
PTX4-202ENST00000440447 RNASE8Q8TDE3 154 aaKnown RBP13.08□□□□□ -0.32
PTX4-202ENST00000440447 C8orf49Q96NF6 230 aa13.08□□□□□ -0.32
PTX4-202ENST00000440447 S100A9P06702 114 aaKnown RBP13.07□□□□□ -0.32
PTX4-202ENST00000440447 TAGLN2P37802 199 aaKnown RBP13.07□□□□□ -0.32
PTX4-202ENST00000440447 TMEM183BQ1AE95 376 aa13.07□□□□□ -0.32
PTX4-202ENST00000440447 ANXA2RQ3ZCQ2 193 aa13.07□□□□□ -0.32
PTX4-202ENST00000440447 CASC10Q5T4H9 136 aa13.07□□□□□ -0.32
PTX4-202ENST00000440447 TEX261Q6UWH6 196 aa13.07□□□□□ -0.32
PTX4-202ENST00000440447 FAM159AQ6UWV7 190 aa13.07□□□□□ -0.32
PTX4-202ENST00000440447 ZNF680Q8NEM1 530 aa13.07□□□□□ -0.32
PTX4-202ENST00000440447 ZFP30Q9Y2G7 519 aa13.07□□□□□ -0.32
PTX4-202ENST00000440447 TIMM8BQ9Y5J9 83 aaPredicted RBP13.07□□□□□ -0.32
PTX4-202ENST00000440447 TRBV6-1A0A0K0K1D8 114 aa13.06□□□□□ -0.32
PTX4-202ENST00000440447 PLAC8L1A1L4L8 177 aa13.06□□□□□ -0.32
PTX4-202ENST00000440447 LYRM9A8MSI8 78 aa13.06□□□□□ -0.32
PTX4-202ENST00000440447 SNURFLB1AK76 121 aa13.06□□□□□ -0.32
PTX4-202ENST00000440447 GCGP01275 180 aa13.06□□□□□ -0.32
PTX4-202ENST00000440447 BCL2P10415 239 aa13.06□□□□□ -0.32
PTX4-202ENST00000440447 MEF2BQ02080 365 aaPredicted RBP13.06□□□□□ -0.32
PTX4-202ENST00000440447 C12orf74Q32Q52 190 aa13.06□□□□□ -0.32
PTX4-202ENST00000440447 MUC21Q5SSG8 566 aa13.06□□□□□ -0.32
PTX4-202ENST00000440447 LYPD6BQ8NI32 183 aa13.06□□□□□ -0.32
PTX4-202ENST00000440447 C2CD4CQ8TF44 421 aa13.06□□□□□ -0.32
PTX4-202ENST00000440447 VAX2Q9UIW0 290 aa13.06□□□□□ -0.32
PTX4-202ENST00000440447 ZNF767PQ75MW2 155 aa13.05□□□□□ -0.32
PTX4-202ENST00000440447 PHLDA1Q8WV24 401 aaPredicted RBP13.05□□□□□ -0.32
PTX4-202ENST00000440447 NAGKQ9UJ70 344 aa13.05□□□□□ -0.32
PTX4-202ENST00000440447 NUPR2A6NF83 97 aa13.04□□□□□ -0.32
PTX4-202ENST00000440447 PDE6DO43924 150 aa13.04□□□□□ -0.32
PTX4-202ENST00000440447 ZNF80P51504 273 aaPredicted RBP13.04□□□□□ -0.32
PTX4-202ENST00000440447 DAD1P61803 113 aa13.04□□□□□ -0.32
PTX4-202ENST00000440447 Q6ZTC4 211 aa13.04□□□□□ -0.32
PTX4-202ENST00000440447 C11orf52Q96A22 123 aa13.04□□□□□ -0.32
PTX4-202ENST00000440447 NOP10Q9NPE3 64 aaKnown RBP13.04□□□□□ -0.32
PTX4-202ENST00000440447 TP53TG3Q9ULZ0 132 aa13.04□□□□□ -0.32
PTX4-202ENST00000440447 LTAP01374 205 aa13.03□□□□□ -0.32
PTX4-202ENST00000440447 PFN1P07737 140 aaKnown RBP13.03□□□□□ -0.32
PTX4-202ENST00000440447 IBA57Q5T440 356 aaKnown RBP13.03□□□□□ -0.32
PTX4-202ENST00000440447 CEMP1Q6PRD7 247 aaPredicted RBP13.03□□□□□ -0.32
PTX4-202ENST00000440447 GSN-AS1Q9NRJ2 163 aa13.03□□□□□ -0.32
PTX4-202ENST00000440447 TRGV11A0A075B6L2 103 aa13.02□□□□□ -0.33
PTX4-202ENST00000440447 TRAV10A0A0B4J240 114 aa13.02□□□□□ -0.33
PTX4-202ENST00000440447 TDRG1Q3Y452 100 aa13.02□□□□□ -0.33
PTX4-202ENST00000440447 C11orf72Q8NBR9 251 aa13.02□□□□□ -0.33
PTX4-202ENST00000440447 KCNS1Q96KK3 526 aa13.02□□□□□ -0.33
PTX4-202ENST00000440447 RBFOX3A6NFN3 312 aa13.01□□□□□ -0.33
PTX4-202ENST00000440447 FABP5P3A8MUU1 101 aa13.01□□□□□ -0.33
PTX4-202ENST00000440447 DEFB130BP0DP73 79 aa13.01□□□□□ -0.33
PTX4-202ENST00000440447 DEFB130AP0DP74 79 aa13.01□□□□□ -0.33
PTX4-202ENST00000440447 RPL35P42766 123 aaKnown RBP13.01□□□□□ -0.33
PTX4-202ENST00000440447 ZNF415Q09FC8 603 aa13.01□□□□□ -0.33
PTX4-202ENST00000440447 DAZ2Q13117 558 aaKnown RBP13.01□□□□□ -0.33
PTX4-202ENST00000440447 COX8CQ7Z4L0 72 aa13.01□□□□□ -0.33
PTX4-202ENST00000440447 BAGE2Q86Y30 109 aa13.01□□□□□ -0.33
PTX4-202ENST00000440447 TMEM183AQ8IXX5 376 aa13.01□□□□□ -0.33
PTX4-202ENST00000440447 SDF2L1Q9HCN8 221 aa13.01□□□□□ -0.33
PTX4-202ENST00000440447 MED9Q9NWA0 146 aa13.01□□□□□ -0.33
PTX4-202ENST00000440447 KLK5Q9Y337 293 aaPredicted RBP13.01□□□□□ -0.33
PTX4-202ENST00000440447 TCL1AP56279 114 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms