RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ZC2HC1BQ5TFG8 222 aa12.61□□□□□ -0.39
PTPN13-204ENST00000436978 A0A087X0K7 114 aa12.6□□□□□ -0.39
PTPN13-204ENST00000436978 OR11H6Q8NGC7 330 aa12.6□□□□□ -0.39
PTPN13-204ENST00000436978 FOXE3Q13461 319 aa12.6□□□□□ -0.39
PTPN13-204ENST00000436978 WT1-ASQ06250 92 aa12.6□□□□□ -0.39
PTPN13-204ENST00000436978 GAGE12BA1L429 117 aa12.6□□□□□ -0.39
PTPN13-204ENST00000436978 GAGE7O76087 117 aa12.6□□□□□ -0.39
PTPN13-204ENST00000436978 GAGE12FP0CL80 117 aa12.6□□□□□ -0.39
PTPN13-204ENST00000436978 GAGE12GP0CL81 117 aa12.6□□□□□ -0.39
PTPN13-204ENST00000436978 GAGE12IP0CL82 117 aa12.6□□□□□ -0.39
PTPN13-204ENST00000436978 HIST1H4AP62805 103 aaKnown RBP12.6□□□□□ -0.39
PTPN13-204ENST00000436978 C9orf66Q5T8R8 295 aa12.6□□□□□ -0.39
PTPN13-204ENST00000436978 CCL24O00175 119 aa12.59□□□□□ -0.39
PTPN13-204ENST00000436978 KIR3DS1Q14943 382 aa12.59□□□□□ -0.39
PTPN13-204ENST00000436978 IGHV3-16A0A0C4DH30 117 aa12.59□□□□□ -0.39
PTPN13-204ENST00000436978 SNHG12Q9BXW3 62 aa12.59□□□□□ -0.39
PTPN13-204ENST00000436978 CACNA1HO95180 2353 aa12.59□□□□□ -0.39
PTPN13-204ENST00000436978 IGHV1-24A0A0C4DH33 117 aa12.59□□□□□ -0.39
PTPN13-204ENST00000436978 K7EM74 188 aa12.59□□□□□ -0.39
PTPN13-204ENST00000436978 FAM120AOSQ5T036 256 aa12.59□□□□□ -0.39
PTPN13-204ENST00000436978 LHBP01229 141 aa12.59□□□□□ -0.39
PTPN13-204ENST00000436978 C1orf147Q96MC9 270 aaPredicted RBP12.59□□□□□ -0.39
PTPN13-204ENST00000436978 A0A1B0GUS0 222 aa12.58□□□□□ -0.4
PTPN13-204ENST00000436978 TMEM213A2RRL7 107 aa12.58□□□□□ -0.4
PTPN13-204ENST00000436978 HERVK_113P63121 156 aa12.58□□□□□ -0.4
PTPN13-204ENST00000436978 C2orf66Q6UXQ4 117 aa12.58□□□□□ -0.4
PTPN13-204ENST00000436978 POU2AF1Q16633 256 aa12.58□□□□□ -0.4
PTPN13-204ENST00000436978 ZNF114Q8NC26 417 aa12.58□□□□□ -0.4
PTPN13-204ENST00000436978 VOPP1Q96AW1 172 aa12.58□□□□□ -0.4
PTPN13-204ENST00000436978 TRAV12-2A0A075B6T6 113 aa12.58□□□□□ -0.4
PTPN13-204ENST00000436978 SDHAF1A6NFY7 115 aa12.58□□□□□ -0.4
PTPN13-204ENST00000436978 K7EMI3 77 aa12.58□□□□□ -0.4
PTPN13-204ENST00000436978 ANXA2RQ3ZCQ2 193 aa12.58□□□□□ -0.4
PTPN13-204ENST00000436978 MRPL51Q4U2R6 128 aaKnown RBP12.58□□□□□ -0.4
PTPN13-204ENST00000436978 Q71RC1 249 aaPredicted RBP12.58□□□□□ -0.4
PTPN13-204ENST00000436978 TPSG1Q9NRR2 321 aa12.58□□□□□ -0.4
PTPN13-204ENST00000436978 PYGO2Q9BRQ0 406 aa12.57□□□□□ -0.4
PTPN13-204ENST00000436978 TCF15Q12870 199 aa12.57□□□□□ -0.4
PTPN13-204ENST00000436978 FXYD5Q96DB9 178 aa12.57□□□□□ -0.4
PTPN13-204ENST00000436978 SPAG8Q99932 426 aaPredicted RBP12.57□□□□□ -0.4
PTPN13-204ENST00000436978 RHOHQ15669 191 aa12.57□□□□□ -0.4
PTPN13-204ENST00000436978 C20orf78Q9BR46 151 aa12.57□□□□□ -0.4
PTPN13-204ENST00000436978 NPBQ8NG41 125 aa12.57□□□□□ -0.4
PTPN13-204ENST00000436978 ZNRF2Q8NHG8 242 aa12.57□□□□□ -0.4
PTPN13-204ENST00000436978 TRAV8-3A0A0A6YYJ7 113 aa12.57□□□□□ -0.4
PTPN13-204ENST00000436978 IGLC1P0CG04 106 aa12.57□□□□□ -0.4
PTPN13-204ENST00000436978 KNCNA6PVL3 124 aa12.56□□□□□ -0.4
PTPN13-204ENST00000436978 RPL32P62910 135 aaKnown RBP12.56□□□□□ -0.4
PTPN13-204ENST00000436978 HLA-DRB4P13762 266 aa12.56□□□□□ -0.4
PTPN13-204ENST00000436978 GAGE2BQ13066 116 aa12.56□□□□□ -0.4
PTPN13-204ENST00000436978 LENEPQ9Y5L5 61 aa12.56□□□□□ -0.4
PTPN13-204ENST00000436978 HLA-DRB4X5D2U9 266 aa12.56□□□□□ -0.4
PTPN13-204ENST00000436978 ZNF48Q96MX3 618 aaPredicted RBP12.56□□□□□ -0.4
PTPN13-204ENST00000436978 A8MWP6 167 aa12.56□□□□□ -0.4
PTPN13-204ENST00000436978 CGB3P0DN86 165 aa12.56□□□□□ -0.4
PTPN13-204ENST00000436978 RBMY1FQ15415 496 aaKnown RBP12.56□□□□□ -0.4
PTPN13-204ENST00000436978 BOD1L2Q8IYS8 172 aa12.55□□□□□ -0.4
PTPN13-204ENST00000436978 TRBV20-1A0A075B6N2 111 aa12.55□□□□□ -0.4
PTPN13-204ENST00000436978 INAFM2P0DMQ5 153 aa12.55□□□□□ -0.4
PTPN13-204ENST00000436978 IGF2BP2-AS1Q96M15 143 aa12.55□□□□□ -0.4
PTPN13-204ENST00000436978 C18orf32Q8TCD1 76 aa12.55□□□□□ -0.4
PTPN13-204ENST00000436978 ZC2HC1AQ96GY0 325 aa12.55□□□□□ -0.4
PTPN13-204ENST00000436978 GAGE6Q13070 117 aa12.55□□□□□ -0.4
PTPN13-204ENST00000436978 DEFB112Q30KQ8 113 aa12.55□□□□□ -0.4
PTPN13-204ENST00000436978 PRR31Q5SQ13 230 aa12.54□□□□□ -0.4
PTPN13-204ENST00000436978 CYYR1Q96J86 154 aa12.54□□□□□ -0.4
PTPN13-204ENST00000436978 V9GYV3 84 aa12.54□□□□□ -0.4
PTPN13-204ENST00000436978 LTAP01374 205 aa12.54□□□□□ -0.4
PTPN13-204ENST00000436978 TRAV13-2A0A0B4J235 113 aa12.54□□□□□ -0.4
PTPN13-204ENST00000436978 RSPO1Q2MKA7 263 aaPredicted RBP12.54□□□□□ -0.4
PTPN13-204ENST00000436978 SH2D6Q7Z4S9 175 aa12.54□□□□□ -0.4
PTPN13-204ENST00000436978 TMEM126AQ9H061 195 aa12.54□□□□□ -0.4
PTPN13-204ENST00000436978 KRTAP27-1Q3LI81 207 aa12.53□□□□□ -0.4
PTPN13-204ENST00000436978 MMP23AO75900 390 aa12.53□□□□□ -0.4
PTPN13-204ENST00000436978 IGKV1-39P01597 117 aa12.53□□□□□ -0.4
PTPN13-204ENST00000436978 IGKV1D-39P04432 117 aa12.53□□□□□ -0.4
PTPN13-204ENST00000436978 GAGE2AQ6NT46 116 aa12.53□□□□□ -0.4
PTPN13-204ENST00000436978 Q8NFD4 153 aa12.53□□□□□ -0.4
PTPN13-204ENST00000436978 WISP1O95388 367 aa12.53□□□□□ -0.4
PTPN13-204ENST00000436978 C22orf46C9J442 243 aa12.52□□□□□ -0.4
PTPN13-204ENST00000436978 IGHV4-59P01825 116 aa12.52□□□□□ -0.4
PTPN13-204ENST00000436978 CD5LO43866 347 aa12.52□□□□□ -0.41
PTPN13-204ENST00000436978 ANGP03950 147 aaKnown RBP12.52□□□□□ -0.41
PTPN13-204ENST00000436978 C16orf74Q96GX8 76 aa12.52□□□□□ -0.41
PTPN13-204ENST00000436978 SOCS3O14543 225 aa12.52□□□□□ -0.41
PTPN13-204ENST00000436978 IGLC7A0M8Q6 106 aa12.51□□□□□ -0.41
PTPN13-204ENST00000436978 TRAV26-2A0A0B4J265 109 aa12.51□□□□□ -0.41
PTPN13-204ENST00000436978 UBE2WQ96B02 151 aa12.51□□□□□ -0.41
PTPN13-204ENST00000436978 SMIM2Q9BVW6 85 aa12.51□□□□□ -0.41
PTPN13-204ENST00000436978 EDA2RQ9HAV5 297 aa12.51□□□□□ -0.41
PTPN13-204ENST00000436978 ADCYAP1P18509 176 aa12.51□□□□□ -0.41
PTPN13-204ENST00000436978 MPV17L2Q567V2 206 aa12.51□□□□□ -0.41
PTPN13-204ENST00000436978 DIAPH2-AS1Q14236 149 aa12.51□□□□□ -0.41
PTPN13-204ENST00000436978 ZNF491Q8N8L2 437 aa12.5□□□□□ -0.41
PTPN13-204ENST00000436978 NOP10Q9NPE3 64 aaKnown RBP12.5□□□□□ -0.41
PTPN13-204ENST00000436978 PFN2P35080 140 aa12.5□□□□□ -0.41
PTPN13-204ENST00000436978 ZNF493Q6ZR52 646 aa12.5□□□□□ -0.41
PTPN13-204ENST00000436978 LGALS9BQ3B8N2 356 aa12.5□□□□□ -0.41
PTPN13-204ENST00000436978 LGALS9CQ6DKI2 356 aa12.5□□□□□ -0.41
PTPN13-204ENST00000436978 EML5Q05BV3 1969 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms