RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 GPX1P07203 203 aa12.3□□□□□ -0.44
CTSD-203ENST00000429746 HTN1P15515 57 aa12.3□□□□□ -0.44
CTSD-203ENST00000429746 Q6AWC8 147 aa12.3□□□□□ -0.44
CTSD-203ENST00000429746 C5orf17Q8NAS9 161 aa12.3□□□□□ -0.44
CTSD-203ENST00000429746 TP53TG3Q9ULZ0 132 aa12.3□□□□□ -0.44
CTSD-203ENST00000429746 EPPK1P58107 5090 aaKnown RBP12.3□□□□□ -0.44
CTSD-203ENST00000429746 IGHV4-4A0A075B6R2 117 aa12.29□□□□□ -0.44
CTSD-203ENST00000429746 KANTRA0A1W2PQU2 76 aa12.29□□□□□ -0.44
CTSD-203ENST00000429746 MAP1LC3B2A6NCE7 125 aa12.29□□□□□ -0.44
CTSD-203ENST00000429746 FAM74A7A6NL05 159 aa12.29□□□□□ -0.44
CTSD-203ENST00000429746 IGLL5B9A064 214 aa12.29□□□□□ -0.44
CTSD-203ENST00000429746 SUMO1P63165 101 aaKnown RBP12.29□□□□□ -0.44
CTSD-203ENST00000429746 ANXA2RQ3ZCQ2 193 aa12.29□□□□□ -0.44
CTSD-203ENST00000429746 CCDC28AQ8IWP9 274 aa12.29□□□□□ -0.44
CTSD-203ENST00000429746 MBD3L1Q8WWY6 194 aa12.29□□□□□ -0.44
CTSD-203ENST00000429746 MAP1LC3BQ9GZQ8 125 aa12.29□□□□□ -0.44
CTSD-203ENST00000429746 RPH3ALQ9UNE2 315 aa12.29□□□□□ -0.44
CTSD-203ENST00000429746 FRAS1Q86XX4 4008 aa12.28□□□□□ -0.44
CTSD-203ENST00000429746 FAM74A1Q5RGS3 127 aa12.28□□□□□ -0.44
CTSD-203ENST00000429746 CMTM2Q8TAZ6 248 aa12.28□□□□□ -0.44
CTSD-203ENST00000429746 SGK494Q96LW2 274 aa12.28□□□□□ -0.44
CTSD-203ENST00000429746 NOP10Q9NPE3 64 aaKnown RBP12.28□□□□□ -0.44
CTSD-203ENST00000429746 EPDR1Q9UM22 224 aa12.28□□□□□ -0.44
CTSD-203ENST00000429746 TIMM8BQ9Y5J9 83 aaPredicted RBP12.28□□□□□ -0.44
CTSD-203ENST00000429746 DAD1P61803 113 aa12.27□□□□□ -0.45
CTSD-203ENST00000429746 DAZ2Q13117 558 aaKnown RBP12.27□□□□□ -0.45
CTSD-203ENST00000429746 C9orf62Q8N4C0 152 aa12.27□□□□□ -0.45
CTSD-203ENST00000429746 EIF4E3Q8N5X7 224 aaKnown RBP12.27□□□□□ -0.45
CTSD-203ENST00000429746 IGHV1OR15-1A0A075B7D0 117 aa12.26□□□□□ -0.45
CTSD-203ENST00000429746 UMAD1C9J7I0 102 aa12.26□□□□□ -0.45
CTSD-203ENST00000429746 ZNF80P51504 273 aaPredicted RBP12.26□□□□□ -0.45
CTSD-203ENST00000429746 UBE2G2P60604 165 aa12.26□□□□□ -0.45
CTSD-203ENST00000429746 AKAP14Q86UN6 197 aa12.26□□□□□ -0.45
CTSD-203ENST00000429746 LINC00479Q96M42 142 aa12.26□□□□□ -0.45
CTSD-203ENST00000429746 SERTM2A0A1B0GWG4 89 aa12.25□□□□□ -0.45
CTSD-203ENST00000429746 F6UZH7 168 aa12.25□□□□□ -0.45
CTSD-203ENST00000429746 DEFB130BP0DP73 79 aa12.25□□□□□ -0.45
CTSD-203ENST00000429746 DEFB130AP0DP74 79 aa12.25□□□□□ -0.45
CTSD-203ENST00000429746 TPT1P13693 172 aaKnown RBP12.25□□□□□ -0.45
CTSD-203ENST00000429746 GSN-AS1Q9NRJ2 163 aa12.25□□□□□ -0.45
CTSD-203ENST00000429746 C11orf21Q9P2W6 132 aa12.25□□□□□ -0.45
CTSD-203ENST00000429746 KLF12Q9Y4X4 402 aa12.25□□□□□ -0.45
CTSD-203ENST00000429746 PFDN1O60925 122 aa12.24□□□□□ -0.45
CTSD-203ENST00000429746 TCL1AP56279 114 aa12.24□□□□□ -0.45
CTSD-203ENST00000429746 TDRG1Q3Y452 100 aa12.24□□□□□ -0.45
CTSD-203ENST00000429746 IBA57Q5T440 356 aaKnown RBP12.24□□□□□ -0.45
CTSD-203ENST00000429746 Q6ZTI0 123 aa12.24□□□□□ -0.45
CTSD-203ENST00000429746 IQCF2Q8IXL9 164 aa12.24□□□□□ -0.45
CTSD-203ENST00000429746 CYB561D1Q8N8Q1 229 aa12.24□□□□□ -0.45
CTSD-203ENST00000429746 TMEM75Q8N9X5 138 aa12.24□□□□□ -0.45
CTSD-203ENST00000429746 FAM213BQ8TBF2 198 aa12.24□□□□□ -0.45
CTSD-203ENST00000429746 C8orf49Q96NF6 230 aa12.24□□□□□ -0.45
CTSD-203ENST00000429746 MUC4Q99102 2169 aa12.24□□□□□ -0.45
CTSD-203ENST00000429746 ATG101Q9BSB4 218 aa12.24□□□□□ -0.45
CTSD-203ENST00000429746 PSG8Q9UQ74 426 aa12.24□□□□□ -0.45
CTSD-203ENST00000429746 DNAH17Q9UFH2 4485 aa12.23□□□□□ -0.45
CTSD-203ENST00000429746 CBY3A6NI87 242 aa12.23□□□□□ -0.45
CTSD-203ENST00000429746 MUC21Q5SSG8 566 aa12.23□□□□□ -0.45
CTSD-203ENST00000429746 DPPA3Q6W0C5 159 aa12.23□□□□□ -0.45
CTSD-203ENST00000429746 ZNF680Q8NEM1 530 aa12.23□□□□□ -0.45
CTSD-203ENST00000429746 TRAV34A0A0B4J273 112 aa12.22□□□□□ -0.45
CTSD-203ENST00000429746 SPINK4O60575 86 aa12.22□□□□□ -0.45
CTSD-203ENST00000429746 ATP5G3P48201 142 aa12.22□□□□□ -0.45
CTSD-203ENST00000429746 FLI1Q01543 452 aaPredicted RBP12.22□□□□□ -0.45
CTSD-203ENST00000429746 TMEM88Q6PEY1 159 aa12.22□□□□□ -0.45
CTSD-203ENST00000429746 SFT2D1Q8WV19 159 aa12.22□□□□□ -0.45
CTSD-203ENST00000429746 FAM210BQ96KR6 192 aa12.22□□□□□ -0.45
CTSD-203ENST00000429746 C18orf15Q96N68 181 aa12.22□□□□□ -0.45
CTSD-203ENST00000429746 TREM1Q9NP99 234 aa12.22□□□□□ -0.45
CTSD-203ENST00000429746 MDFICQ9P1T7 246 aa12.22□□□□□ -0.45
CTSD-203ENST00000429746 ARL2-SNX15V9GYD0 113 aa12.22□□□□□ -0.45
CTSD-203ENST00000429746 FAT2Q9NYQ8 4349 aa12.21□□□□□ -0.45
CTSD-203ENST00000429746 PEX7O00628 323 aa12.21□□□□□ -0.45
CTSD-203ENST00000429746 RGS13O14921 159 aa12.21□□□□□ -0.45
CTSD-203ENST00000429746 HTN3P15516 51 aa12.21□□□□□ -0.45
CTSD-203ENST00000429746 HOXA5P20719 270 aa12.21□□□□□ -0.45
CTSD-203ENST00000429746 EIF5AP63241 154 aaKnown RBP12.21□□□□□ -0.45
CTSD-203ENST00000429746 CCL20P78556 96 aa12.21□□□□□ -0.45
CTSD-203ENST00000429746 NACAE9PAV3 2078 aa12.21□□□□□ -0.45
CTSD-203ENST00000429746 GAGE12BA1L429 117 aa12.2□□□□□ -0.46
CTSD-203ENST00000429746 SNURFLB1AK76 121 aa12.2□□□□□ -0.46
CTSD-203ENST00000429746 GAGE7O76087 117 aa12.2□□□□□ -0.46
CTSD-203ENST00000429746 ATP5G1P05496 136 aa12.2□□□□□ -0.46
CTSD-203ENST00000429746 GAGE12FP0CL80 117 aa12.2□□□□□ -0.46
CTSD-203ENST00000429746 GAGE12GP0CL81 117 aa12.2□□□□□ -0.46
CTSD-203ENST00000429746 GAGE12IP0CL82 117 aa12.2□□□□□ -0.46
CTSD-203ENST00000429746 SULT1A2P50226 295 aa12.2□□□□□ -0.46
CTSD-203ENST00000429746 COX8CQ7Z4L0 72 aa12.2□□□□□ -0.46
CTSD-203ENST00000429746 Q86TA4 180 aa12.2□□□□□ -0.46
CTSD-203ENST00000429746 SLC51BQ86UW2 128 aa12.2□□□□□ -0.46
CTSD-203ENST00000429746 NDUFAF3Q9BU61 184 aa12.2□□□□□ -0.46
CTSD-203ENST00000429746 NKX6-2Q9C056 277 aaPredicted RBP12.2□□□□□ -0.46
CTSD-203ENST00000429746 TRAV1-1A0A0B4J248 108 aa12.19□□□□□ -0.46
CTSD-203ENST00000429746 A0A1B0GV50 99 aa12.19□□□□□ -0.46
CTSD-203ENST00000429746 PAGE4O60829 102 aa12.19□□□□□ -0.46
CTSD-203ENST00000429746 PRNTQ86SH4 94 aa12.19□□□□□ -0.46
CTSD-203ENST00000429746 ZNF575Q86XF7 245 aa12.19□□□□□ -0.46
CTSD-203ENST00000429746 HIST1H2BAQ96A08 127 aa12.19□□□□□ -0.46
CTSD-203ENST00000429746 TRAV21A0A0B4J279 112 aa12.18□□□□□ -0.46
CTSD-203ENST00000429746 IGHV3-16A0A0C4DH30 117 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms