RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 TTTY13Q9BZ97 58 aa4.37□□□□□ -1.71
VTI1BP4-201ENST00000427516 V9GYY9 64 aa4.37□□□□□ -1.71
VTI1BP4-201ENST00000427516 GTF3C1Q12789 2109 aa4.37□□□□□ -1.71
VTI1BP4-201ENST00000427516 ARID1BQ8NFD5 2236 aaPredicted RBP4.37□□□□□ -1.71
VTI1BP4-201ENST00000427516 PCDH15Q96QU1 1955 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 IGLV2-18A0A075B6J9 118 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 TEX49A0A1B0GTD5 131 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 OOSP1A8MZH6 123 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 CDX4O14627 284 aaPredicted RBP4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 MRPS12O15235 138 aaKnown RBP4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 BCE1O60756 84 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 PLAUP00749 431 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 MED14OSP0DP75 135 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 PLA2G5P39877 138 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 RPL27AP46776 148 aaKnown RBP4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 RPL18AQ02543 176 aaKnown RBP4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 PCOLCEQ15113 449 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 WDR86Q86TI4 376 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 TMEM263Q8WUH6 116 aaKnown RBP4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 MRPL53Q96EL3 112 aaKnown RBP4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 DPH3Q96FX2 82 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 RNF185Q96GF1 192 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 C20orf173Q96LM9 149 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 RPUSD1Q9UJJ7 312 aaKnown RBP4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 MSRB2Q9Y3D2 182 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 ALPK2Q86TB3 2170 aa4.36□□□□□ -1.71
VTI1BP4-201ENST00000427516 EML6Q6ZMW3 1958 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 A0A0G2JNJ9 132 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 C17orf100A8MU93 164 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 J3QQQ9 107 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 OVOL3O00110 214 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 LST1O00453 97 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 LEPROTO15243 131 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 RS1O15537 224 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 PROP1O75360 226 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 RNASE1P07998 156 aaKnown RBP4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 PSMB8P28062 276 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 FOLR3P41439 243 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 SUMO2P61956 95 aaKnown RBP4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 TCF15Q12870 199 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 FAM222AQ5U5X8 452 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 SPANXN1Q5VSR9 72 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 TMEM200BQ69YZ2 307 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 DUX4L9Q6RFH8 374 aaPredicted RBP4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 C5orf38Q86SI9 138 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 EXOC3-AS1Q8N2X6 119 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 KLF14Q8TD94 323 aaPredicted RBP4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 VSIG2Q96IQ7 327 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 RNF5Q99942 180 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 Q9UFV3 132 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 ICOSQ9Y6W8 199 aa4.35□□□□□ -1.71
VTI1BP4-201ENST00000427516 TRAV12-2A0A075B6T6 113 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 A0A0J9YXY3 114 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 SMKR1H3BMG3 65 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 K7ENP7 123 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 IGHV1-69P01742 117 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 IGHV4-39P01824 125 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 ELANEP08246 267 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 CGB3P0DN86 165 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 CGB7P0DN87 165 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 WT1P19544 449 aaPredicted RBP4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 NXPH1P58417 271 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 HIST1H4AP62805 103 aaKnown RBP4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 WT1-ASQ06250 92 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 ERCC8Q13216 396 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 DEFB133Q30KQ1 61 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 C2orf66Q6UXQ4 117 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 PRIMA1Q86XR5 153 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 LINC00311Q8N616 119 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 CD177Q8N6Q3 437 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 FAM216BQ8N7L0 139 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 RNF125Q96EQ8 232 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 IMMP1LQ96LU5 166 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 C1orf43Q9BWL3 253 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 AGPAT4-IT1Q9H0P7 198 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 DPH3P1Q9H4G8 78 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 JPT2Q9H910 190 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 LENEPQ9Y5L5 61 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 SERP1Q9Y6X1 66 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 NOTCH4Q99466 2003 aa4.34□□□□□ -1.71
VTI1BP4-201ENST00000427516 SPAG17Q6Q759 2223 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 LOC107984640A0A0U1RRK4 108 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 TINCRA0A1B0GVN0 87 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 H7C423 109 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 NDUFC1O43677 76 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 TIMM17BO60830 172 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 DNAL4O96015 105 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 IGHV3-13P01766 116 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 IGHV3-9P01782 118 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 EGR2P11161 476 aaPredicted RBP4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 ZNF134P52741 427 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 EFNA4P52798 201 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 SYNJ2BPP57105 145 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 FXYD7P58549 80 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 SEC61GP60059 68 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 CIRBPQ14011 172 aaKnown RBP4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 GUSBP11Q6P575 273 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 SFTA2Q6UW10 78 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms