RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 VSIRQ9H7M9 311 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 LRRK2Q5S007 2527 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 ARID1AO14497 2285 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 TRGV10A0A0A0MS01 117 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 ZNF850A8MQ14 1090 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 C15orf65H3BRN8 121 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 KRTAP27-1Q3LI81 207 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 C1orf140Q5VVS0 124 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 CEMP1Q6PRD7 247 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-207ENST00000419472 BPIFA4PQ86YQ2 179 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 KLHL30-AS1Q8NEE0 82 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 SRSF12Q8WXF0 261 aaKnown RBP3.68□□□□□ -1.82
VPS13A-207ENST00000419472 EMC6Q9BV81 110 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 NAA60Q9H7X0 242 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 ARL2-SNX15V9GYD0 113 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 TMEM14DPA8MWL7 114 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 SYS1-DBNDD2H3BUS1 97 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 M0R2Z0 102 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 NTF3P20783 257 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 DIAPH2-AS1Q14236 149 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 ACP7Q6ZNF0 438 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 TMEM136Q6ZRR5 245 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 TEX29Q8N6K0 151 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 ZNF645Q8N7E2 425 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 C20orf78Q9BR46 151 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 SLC25A2Q9BXI2 301 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 DEFB126Q9BYW3 111 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 ZNF286AQ9HBT8 521 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 TET2Q6N021 2002 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-207ENST00000419472 TMED7-TICAM2A0A0A6YYA0 188 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 MDFIC2A0A1B0GVS7 189 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 KLF7O75840 302 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-207ENST00000419472 SH2D6Q7Z4S9 175 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 C11orf53Q8IXP5 236 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 GATD1Q8NB37 220 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 OR1L1Q8NH94 360 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 ATP6V0E2Q8NHE4 81 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 FXYD5Q96DB9 178 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 SLC25A44Q96H78 314 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-207ENST00000419472 SLC39A9Q9NUM3 307 aa3.68□□□□□ -1.82
VPS13A-207ENST00000419472 A0A1W2PPR1 153 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 PEX7O00628 323 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 HMGB3O15347 200 aaKnown RBP3.67□□□□□ -1.82
VPS13A-207ENST00000419472 CST7O76096 145 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 ROS1P08922 2347 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 SRIP30626 198 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 INSL3P51460 131 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 TCTAP57738 103 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 HBG1P69891 147 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 HBG2P69892 147 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 PSG7Q13046 419 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 SP6Q3SY56 376 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 CLEC19AQ6UXS0 136 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 Q6ZS49 121 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 Q6ZS92 163 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 CEND1Q8N111 149 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 RBM12B-AS1Q9P1G2 102 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 TMEM14AQ9Y6G1 99 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 FN1P02751 2386 aaKnown RBP3.67□□□□□ -1.82
VPS13A-207ENST00000419472 IGKV2D-30A0A075B6S6 120 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 IGHV3-15A0A0B4J1V0 119 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 C8orf87E5RJ46 101 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 FNDC10F2Z333 226 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 IGHV3-7P01780 117 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 APOA2P02652 100 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 ASAH2BP0C7U1 165 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 EVI2AP22794 236 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 RSPO1Q2MKA7 263 aaPredicted RBP3.67□□□□□ -1.82
VPS13A-207ENST00000419472 ETDBQ3ZM63 59 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 PRNTQ86SH4 94 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 OSR2Q8N2R0 312 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 LINC00337Q8N6G1 96 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 C20orf203Q8NBC4 194 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 SCGB1C1Q8TD33 95 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 ADAT3Q96EY9 351 aaPredicted RBP3.67□□□□□ -1.82
VPS13A-207ENST00000419472 TMEM191AQ9H0A3 160 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 PRO0461Q9UI25 63 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 DOCK10Q96BY6 2186 aa3.67□□□□□ -1.82
VPS13A-207ENST00000419472 NDUFC2-KCTD14E9PQ53 114 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 SSSCA1O60232 199 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 BGLAPP02818 100 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 SMIM13P0DJ93 91 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 FGF6P10767 208 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 CTLA4P16410 223 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 BLVRBP30043 206 aaPredicted RBP3.66□□□□□ -1.82
VPS13A-207ENST00000419472 KRTAP24-1Q3LI83 254 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 CASC10Q5T4H9 136 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 SLC22A24Q8N4F4 322 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 RAB37Q96AX2 223 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 GPX7Q96SL4 187 aaPredicted RBP3.66□□□□□ -1.82
VPS13A-207ENST00000419472 OPRPNQ99935 248 aaPredicted RBP3.66□□□□□ -1.82
VPS13A-207ENST00000419472 KRTAP17-1Q9BYP8 105 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 SLC25A39Q9BZJ4 359 aaPredicted RBP3.66□□□□□ -1.82
VPS13A-207ENST00000419472 PRR14LQ5THK1 2151 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 MAP1AP78559 2803 aaPredicted RBP3.66□□□□□ -1.82
VPS13A-207ENST00000419472 FREM1Q5H8C1 2179 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 IGLV3-12A0A075B6K2 115 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 IGKV1D-43A0A0B4J1Z2 117 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 CXorf1O96002 111 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms