RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 K7EQM0 130 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 ARPC5O15511 151 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 BCL2L11O43521 198 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 MPDU1O75352 247 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 EIF3GO75821 320 aaKnown RBP eCLIP3.16□□□□□ -1.9
PTPRK-209ENST00000415046 CD5P06127 495 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 GALR1P47211 349 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 B2MP61769 119 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 DEFB135Q30KP9 77 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 ACTL10Q5JWF8 245 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 C1orf194Q5T5A4 169 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 Q6ZRG5 221 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 LINC00305Q7Z4B0 112 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 RNF182Q8N6D2 247 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 INO80EQ8NBZ0 244 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-209ENST00000415046 OR1L4Q8NGR5 311 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 LRRC20Q8TCA0 184 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 SCGB1C1Q8TD33 95 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 C2orf48Q96LS8 159 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 RCHY1Q96PM5 261 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 NDUFAF3Q9BU61 184 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 WDR61Q9GZS3 305 aaKnown RBP3.16□□□□□ -1.9
PTPRK-209ENST00000415046 KCNIP2Q9NS61 270 aa3.16□□□□□ -1.9
PTPRK-209ENST00000415046 MUC4Q99102 2169 aa3.15□□□□□ -1.9
PTPRK-209ENST00000415046 HUWE1Q7Z6Z7 4374 aaKnown RBP3.15□□□□□ -1.91
PTPRK-209ENST00000415046 TRAV2A0A0B4J234 112 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 RNF222A6NCQ9 220 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 F6UB75 175 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 G3V3Q6 166 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 SLC17A3O00476 420 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 CA1P00915 261 aaPredicted RBP3.15□□□□□ -1.91
PTPRK-209ENST00000415046 ZNF705DP0CH99 300 aaPredicted RBP3.15□□□□□ -1.91
PTPRK-209ENST00000415046 ZNF705BP0CI00 300 aaPredicted RBP3.15□□□□□ -1.91
PTPRK-209ENST00000415046 PYYP10082 97 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 RPL7P18124 248 aaKnown RBP3.15□□□□□ -1.91
PTPRK-209ENST00000415046 HLA-DMBP28068 263 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 S100A7P31151 101 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 TAGLN2P37802 199 aaKnown RBP3.15□□□□□ -1.91
PTPRK-209ENST00000415046 ID1P41134 155 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 RPL29P47914 159 aaKnown RBP3.15□□□□□ -1.91
PTPRK-209ENST00000415046 PSMB3P49720 205 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 MEOX2P50222 304 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 APOC4P55056 127 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 CMC4P56277 68 aaPredicted RBP3.15□□□□□ -1.91
PTPRK-209ENST00000415046 FXYD7P58549 80 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 PLP1P60201 277 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 RAB2AP61019 212 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 SNRPD3P62318 126 aaKnown RBP3.15□□□□□ -1.91
PTPRK-209ENST00000415046 SRSF9Q13242 221 aaKnown RBP eCLIP3.15□□□□□ -1.91
PTPRK-209ENST00000415046 FAM78BQ5VT40 261 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 RPL7L1Q6DKI1 246 aaKnown RBP3.15□□□□□ -1.91
PTPRK-209ENST00000415046 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 Q6ZVQ6 151 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 MIR17HGQ75NE6 70 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 S100A7AQ86SG5 101 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 Q8NBF4 154 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 ZNF738Q8NE65 137 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 DCANP1Q8TF63 244 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 BLNKQ8WV28 456 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 ASB13Q8WXK3 278 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 GPR82Q96P67 336 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 AQP10Q96PS8 301 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 PFDN5Q99471 154 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 VCX2Q9H322 139 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 TNFSF18Q9UNG2 199 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 U3KQK5 164 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 CSMD3Q7Z407 3707 aa3.15□□□□□ -1.91
PTPRK-209ENST00000415046 BORCS7-ASMTA0A0B4J1R7 106 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 TRAV8-2A0A0B4J237 113 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 A0A1B0GVG6 124 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 H3BQ15 152 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 ISLRO14498 428 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 HMGB3O15347 200 aaKnown RBP3.14□□□□□ -1.91
PTPRK-209ENST00000415046 OR7C2O60412 319 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 OR10J4P0C629 311 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 C4BPBP20851 252 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 ATP6V0CP27449 155 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 FHITP49789 147 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 XGP55808 180 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 UBE2L3P68036 154 aaKnown RBP3.14□□□□□ -1.91
PTPRK-209ENST00000415046 GDF5OSQ5U4N7 250 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 EBLN2Q6P2I7 272 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 LCN15Q6UWW0 184 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 AKAP14Q86UN6 197 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 BPIFA4PQ86YQ2 179 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 LINC00518Q8N0U6 118 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 POM121L12Q8N7R1 296 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 OR4B1Q8NGF8 309 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 GATAD1Q8WUU5 269 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 TM2D3Q9BRN9 247 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 SLC25A2Q9BXI2 301 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 MFFQ9GZY8 342 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 SH3BGRL3Q9H299 93 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 RPRMQ9NS64 109 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 CLEC5AQ9NY25 188 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 XCL2Q9UBD3 114 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 FUT9Q9Y231 359 aa3.14□□□□□ -1.91
PTPRK-209ENST00000415046 A0A0J9YX75 114 aa3.13□□□□□ -1.91
PTPRK-209ENST00000415046 A0A1W2PPV4 95 aa3.13□□□□□ -1.91
PTPRK-209ENST00000415046 KANTRA0A1W2PQU2 76 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms