RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 C15orf65H3BRN8 121 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 FXYD1O00168 92 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 GNGT2O14610 69 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 GYG2O15488 501 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 CA2P00918 260 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 IGHV3-53P01767 116 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 HBZP02008 142 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 GYPBP06028 91 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 CTXN2P0C2S0 81 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 SEC11BP0C7V7 166 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 CD36P16671 472 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 HLA-DMBP28068 263 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 RCVRNP35243 200 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 ZNF93P35789 620 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 RPS27P42677 84 aaKnown RBP1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 AKR1C2P52895 323 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 RBM11P57052 281 aaKnown RBP1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 UBE2KP61086 200 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 PSME3P61289 254 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 SNRPD3P62318 126 aaKnown RBP1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 ELF3P78545 371 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 RHOGP84095 191 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 IL15RAQ13261 267 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 CDK5R1Q15078 307 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TNXAQ16473 311 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 Q499Y3 187 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 OGFRL1Q5TC84 451 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 AMMECR1LQ6DCA0 310 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TCF24Q7RTU0 167 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TMEM144Q7Z5S9 345 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 SPATA24Q86W54 205 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 GRPEL2Q8TAA5 225 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TNFAIP8L1Q8WVP5 186 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TLCD1Q96CP7 247 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 ABHD14BQ96IU4 210 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TMEM70Q9BUB7 260 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 HIGD2AQ9BW72 106 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 ALX4Q9H161 411 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 FBXL15Q9H469 300 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TAF9BQ9HBM6 251 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 BABAM2Q9NXR7 383 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 FKBP11Q9NYL4 201 aa1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 ZNF230Q9UIE0 474 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1140P-201ENST00000410517 FAT1Q14517 4588 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 MUC4Q99102 2169 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TRAV14DV4A0A0A6YYC5 116 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TRAV8-3A0A0A6YYJ7 113 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TRAV5A0A0B4J249 113 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 A0A1B0GW15 77 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 A0A1B0GW64 132 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 IRGMA1A4Y4 181 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TMEM213A2RRL7 107 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 RBFOX3A6NFN3 312 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 GSTZ1O43708 216 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 PDCD6O75340 191 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 SOX14O95416 240 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 HTR1AP08908 422 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 SAA2P0DJI9 122 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 PSMD7P51665 324 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 MAGOHP61326 146 aaKnown RBP1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 CD164Q04900 197 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 BAXQ07812 192 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 CDK10Q15131 360 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 MSMO1Q15800 293 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 LTC4SQ16873 150 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 RBM48Q5RL73 367 aaKnown RBP1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 Q5VSD8 79 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 LPCAT4Q643R3 524 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 SPATA12Q7Z6I5 190 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 S100A7AQ86SG5 101 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 C10orf67Q8IYJ2 551 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 C10orf126Q8N4M7 172 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 FER1L6-AS1Q8NA97 138 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 Q8NAQ8 132 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 OR5AK2Q8NH90 309 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 RBPMSQ93062 196 aaKnown RBP1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 DGCR14Q96DF8 476 aaKnown RBP1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TVP23CQ96ET8 276 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 ATP6V1G3Q96LB4 118 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TSC22D3Q99576 134 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 UPK3BQ9BT76 320 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 FAAP24Q9BTP7 215 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 ZNF436Q9C0F3 470 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 SPANXB1Q9NS25 103 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TNCP24821 2201 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 VPS13BQ7Z7G8 4022 aa1.41□□□□□ -2.18
RNU6-1140P-201ENST00000410517 TRAV30A0A087WSZ9 112 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 IGHV3-43A0A0B4J1X8 118 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PIGBOS1A0A0B4J2F0 54 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 IGKV1-9A0A0C4DH69 117 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 IGKV1-6A0A0C4DH72 117 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 IGKV1-12A0A0C4DH73 117 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 DAPL1A0PJW8 107 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CORTO00230 105 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 GEMIN2O14893 280 aaKnown RBP1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 DENRO43583 198 aaKnown RBP1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 EDF1O60869 148 aaKnown RBP1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 RPP14O95059 124 aaKnown RBP1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 IGKV1-39P01597 117 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 IGKV1D-12P01611 117 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms