RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 LINC00588Q9Y4M8 146 aa12.33□□□□□ -0.44
LSM5-204ENST00000409909 TRGV1A0A0A0MS02 117 aa12.32□□□□□ -0.44
LSM5-204ENST00000409909 A0A1B0GVY2 172 aa12.32□□□□□ -0.44
LSM5-204ENST00000409909 RNF222A6NCQ9 220 aa12.32□□□□□ -0.44
LSM5-204ENST00000409909 SPINK4O60575 86 aa12.32□□□□□ -0.44
LSM5-204ENST00000409909 IBA57Q5T440 356 aaKnown RBP12.32□□□□□ -0.44
LSM5-204ENST00000409909 ZNRF2Q8NHG8 242 aa12.32□□□□□ -0.44
LSM5-204ENST00000409909 ASB13Q8WXK3 278 aa12.32□□□□□ -0.44
LSM5-204ENST00000409909 C18orf15Q96N68 181 aa12.32□□□□□ -0.44
LSM5-204ENST00000409909 PSMG3Q9BT73 122 aaPredicted RBP12.32□□□□□ -0.44
LSM5-204ENST00000409909 SH3BGRL3Q9H299 93 aa12.32□□□□□ -0.44
LSM5-204ENST00000409909 HERC2O95714 4834 aa12.32□□□□□ -0.44
LSM5-204ENST00000409909 MUC4Q99102 2169 aa12.32□□□□□ -0.44
LSM5-204ENST00000409909 TRGV2A0A075B6R0 118 aa12.31□□□□□ -0.44
LSM5-204ENST00000409909 STAG3L2P0CL84 134 aa12.31□□□□□ -0.44
LSM5-204ENST00000409909 STAG3L3P0CL85 134 aa12.31□□□□□ -0.44
LSM5-204ENST00000409909 ARL14EPLP0DKL9 152 aa12.31□□□□□ -0.44
LSM5-204ENST00000409909 CDC34P49427 236 aaPredicted RBP12.31□□□□□ -0.44
LSM5-204ENST00000409909 CCL18P55774 89 aa12.31□□□□□ -0.44
LSM5-204ENST00000409909 MUC21Q5SSG8 566 aa12.31□□□□□ -0.44
LSM5-204ENST00000409909 TMED6Q8WW62 240 aa12.31□□□□□ -0.44
LSM5-204ENST00000409909 RAB24Q969Q5 203 aa12.31□□□□□ -0.44
LSM5-204ENST00000409909 RPH3ALQ9UNE2 315 aa12.31□□□□□ -0.44
LSM5-204ENST00000409909 LENEPQ9Y5L5 61 aa12.31□□□□□ -0.44
LSM5-204ENST00000409909 KIAA1109Q2LD37 5005 aa12.3□□□□□ -0.44
LSM5-204ENST00000409909 PRSS29PA6NIE9 313 aa12.3□□□□□ -0.44
LSM5-204ENST00000409909 G3V3Q6 166 aa12.3□□□□□ -0.44
LSM5-204ENST00000409909 RGS21Q2M5E4 152 aa12.3□□□□□ -0.44
LSM5-204ENST00000409909 Q6AWC8 147 aa12.3□□□□□ -0.44
LSM5-204ENST00000409909 GOLT1AQ6ZVE7 132 aa12.3□□□□□ -0.44
LSM5-204ENST00000409909 INO80EQ8NBZ0 244 aaPredicted RBP12.3□□□□□ -0.44
LSM5-204ENST00000409909 CMTM2Q8TAZ6 248 aa12.3□□□□□ -0.44
LSM5-204ENST00000409909 VSIG2Q96IQ7 327 aa12.3□□□□□ -0.44
LSM5-204ENST00000409909 TNFSF18Q9UNG2 199 aa12.3□□□□□ -0.44
LSM5-204ENST00000409909 FXYD6-FXYD2A0A087WZ82 144 aa12.29□□□□□ -0.44
LSM5-204ENST00000409909 TRAV8-1A0A0A6YYK1 113 aa12.29□□□□□ -0.44
LSM5-204ENST00000409909 H3BNG1 76 aa12.29□□□□□ -0.44
LSM5-204ENST00000409909 GNG5P63218 68 aa12.29□□□□□ -0.44
LSM5-204ENST00000409909 SERF2P84101 59 aa12.29□□□□□ -0.44
LSM5-204ENST00000409909 FAM74A1Q5RGS3 127 aa12.29□□□□□ -0.44
LSM5-204ENST00000409909 RPL7L1Q6DKI1 246 aaKnown RBP12.29□□□□□ -0.44
LSM5-204ENST00000409909 SSX7Q7RTT5 188 aa12.29□□□□□ -0.44
LSM5-204ENST00000409909 ARL6IP6Q8N6S5 226 aa12.29□□□□□ -0.44
LSM5-204ENST00000409909 OR2T35Q8NGX2 323 aa12.29□□□□□ -0.44
LSM5-204ENST00000409909 SUN5Q8TC36 379 aa12.29□□□□□ -0.44
LSM5-204ENST00000409909 TVP23CQ96ET8 276 aa12.29□□□□□ -0.44
LSM5-204ENST00000409909 ARPC5LQ9BPX5 153 aa12.29□□□□□ -0.44
LSM5-204ENST00000409909 MRPL16Q9NX20 251 aaKnown RBP12.29□□□□□ -0.44
LSM5-204ENST00000409909 MDFICQ9P1T7 246 aa12.29□□□□□ -0.44
LSM5-204ENST00000409909 GCHFRP30047 84 aa12.28□□□□□ -0.44
LSM5-204ENST00000409909 DYNC1H1Q14204 4646 aaKnown RBP12.28□□□□□ -0.44
LSM5-204ENST00000409909 NBDYA0A0U1RRE5 68 aa12.27□□□□□ -0.45
LSM5-204ENST00000409909 MBP02144 154 aa12.27□□□□□ -0.45
LSM5-204ENST00000409909 ESRGQ1W209 222 aa12.27□□□□□ -0.45
LSM5-204ENST00000409909 C1orf134Q5TEV5 83 aa12.27□□□□□ -0.45
LSM5-204ENST00000409909 ST6GAL2Q96JF0 529 aa12.27□□□□□ -0.45
LSM5-204ENST00000409909 DNAH11Q96DT5 4516 aa12.26□□□□□ -0.45
LSM5-204ENST00000409909 IGHV3-53P01767 116 aa12.26□□□□□ -0.45
LSM5-204ENST00000409909 ZNF415Q09FC8 603 aa12.26□□□□□ -0.45
LSM5-204ENST00000409909 TMEM183BQ1AE95 376 aa12.26□□□□□ -0.45
LSM5-204ENST00000409909 TMEM183AQ8IXX5 376 aa12.26□□□□□ -0.45
LSM5-204ENST00000409909 SGK494Q96LW2 274 aa12.26□□□□□ -0.45
LSM5-204ENST00000409909 A0A096LPF7 62 aa12.25□□□□□ -0.45
LSM5-204ENST00000409909 TDRG1Q3Y452 100 aa12.25□□□□□ -0.45
LSM5-204ENST00000409909 FAM159AQ6UWV7 190 aa12.25□□□□□ -0.45
LSM5-204ENST00000409909 ACTR3CQ9C0K3 210 aaPredicted RBP12.25□□□□□ -0.45
LSM5-204ENST00000409909 BORCS7-ASMTA0A0B4J1R7 106 aa12.24□□□□□ -0.45
LSM5-204ENST00000409909 F6UZH7 168 aa12.24□□□□□ -0.45
LSM5-204ENST00000409909 GNRH2O43555 120 aa12.24□□□□□ -0.45
LSM5-204ENST00000409909 CXorf1O96002 111 aa12.24□□□□□ -0.45
LSM5-204ENST00000409909 TCRAP04437 139 aa12.24□□□□□ -0.45
LSM5-204ENST00000409909 ZNF726P1Q15940 193 aa12.24□□□□□ -0.45
LSM5-204ENST00000409909 SOHLH1Q5JUK2 328 aa12.24□□□□□ -0.45
LSM5-204ENST00000409909 Q9H8V8 135 aa12.24□□□□□ -0.45
LSM5-204ENST00000409909 TREM1Q9NP99 234 aa12.24□□□□□ -0.45
LSM5-204ENST00000409909 NAGKQ9UJ70 344 aa12.24□□□□□ -0.45
LSM5-204ENST00000409909 GGTLC3B5MD39 225 aa12.23□□□□□ -0.45
LSM5-204ENST00000409909 SUMO1P63165 101 aaKnown RBP12.23□□□□□ -0.45
LSM5-204ENST00000409909 FHL2Q14192 279 aa12.23□□□□□ -0.45
LSM5-204ENST00000409909 C5orf17Q8NAS9 161 aa12.23□□□□□ -0.45
LSM5-204ENST00000409909 TMEM167BQ9NRX6 74 aa12.23□□□□□ -0.45
LSM5-204ENST00000409909 TRGV11A0A075B6L2 103 aa12.22□□□□□ -0.45
LSM5-204ENST00000409909 SMLR1H3BR10 107 aa12.22□□□□□ -0.45
LSM5-204ENST00000409909 IGLV2-11P01706 119 aa12.22□□□□□ -0.45
LSM5-204ENST00000409909 RASL10AQ92737 203 aa12.22□□□□□ -0.45
LSM5-204ENST00000409909 SPXQ9BT56 116 aa12.22□□□□□ -0.45
LSM5-204ENST00000409909 UPK3BQ9BT76 320 aa12.22□□□□□ -0.45
LSM5-204ENST00000409909 CYTL1Q9NRR1 136 aa12.22□□□□□ -0.45
LSM5-204ENST00000409909 EPDR1Q9UM22 224 aa12.22□□□□□ -0.45
LSM5-204ENST00000409909 TRAV21A0A0B4J279 112 aa12.21□□□□□ -0.45
LSM5-204ENST00000409909 IGHV3-16A0A0C4DH30 117 aa12.21□□□□□ -0.45
LSM5-204ENST00000409909 SERTM2A0A1B0GWG4 89 aa12.21□□□□□ -0.45
LSM5-204ENST00000409909 ARPC5O15511 151 aa12.21□□□□□ -0.45
LSM5-204ENST00000409909 PAX4O43316 350 aa12.21□□□□□ -0.45
LSM5-204ENST00000409909 ZNF80P51504 273 aaPredicted RBP12.21□□□□□ -0.45
LSM5-204ENST00000409909 C8orf49Q96NF6 230 aa12.21□□□□□ -0.45
LSM5-204ENST00000409909 KRTAP1-5Q9BYS1 174 aa12.21□□□□□ -0.45
LSM5-204ENST00000409909 PRO0255Q9UI72 69 aa12.21□□□□□ -0.45
LSM5-204ENST00000409909 HHLA3Q9XRX5 114 aa12.21□□□□□ -0.45
LSM5-204ENST00000409909 MRPS16Q9Y3D3 137 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms