RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ZNF680Q8NEM1 530 aa12.69□□□□□ -0.38
PDLIM2-206ENST00000409141 ZNF471Q9BX82 626 aaPredicted RBP12.69□□□□□ -0.38
PDLIM2-206ENST00000409141 TMPRSS5Q9H3S3 457 aa12.69□□□□□ -0.38
PDLIM2-206ENST00000409141 IGHV1OR15-1A0A075B7D0 117 aa12.68□□□□□ -0.38
PDLIM2-206ENST00000409141 BCL2L11O43521 198 aa12.68□□□□□ -0.38
PDLIM2-206ENST00000409141 FGF8P55075 233 aaPredicted RBP12.68□□□□□ -0.38
PDLIM2-206ENST00000409141 GSN-AS1Q9NRJ2 163 aa12.68□□□□□ -0.38
PDLIM2-206ENST00000409141 TRAV8-1A0A0A6YYK1 113 aa12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 SERTM2A0A1B0GWG4 89 aa12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 GAGE12BA1L429 117 aa12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 F5H768 121 aa12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 K7EQM0 130 aa12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 PFDN1O60925 122 aa12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 GAGE7O76087 117 aa12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 TCRAP04437 139 aa12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 GAGE12FP0CL80 117 aa12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 GAGE12GP0CL81 117 aa12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 GAGE12IP0CL82 117 aa12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 DAZ2Q13117 558 aaKnown RBP12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 TMUB2Q71RG4 321 aa12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 EPDR1Q9UM22 224 aa12.67□□□□□ -0.38
PDLIM2-206ENST00000409141 A0A1W2PRE2 83 aa12.66□□□□□ -0.38
PDLIM2-206ENST00000409141 GGTLC3B5MD39 225 aa12.66□□□□□ -0.38
PDLIM2-206ENST00000409141 SEC11BP0C7V7 166 aa12.66□□□□□ -0.38
PDLIM2-206ENST00000409141 TMEM88Q6PEY1 159 aa12.66□□□□□ -0.38
PDLIM2-206ENST00000409141 C11orf72Q8NBR9 251 aa12.66□□□□□ -0.38
PDLIM2-206ENST00000409141 SGK494Q96LW2 274 aa12.66□□□□□ -0.38
PDLIM2-206ENST00000409141 TREM1Q9NP99 234 aa12.66□□□□□ -0.38
PDLIM2-206ENST00000409141 TP53TG3Q9ULZ0 132 aa12.66□□□□□ -0.38
PDLIM2-206ENST00000409141 MAP1LC3B2A6NCE7 125 aa12.65□□□□□ -0.38
PDLIM2-206ENST00000409141 UBE2G2P60604 165 aa12.65□□□□□ -0.38
PDLIM2-206ENST00000409141 EIF5AP63241 154 aaKnown RBP12.65□□□□□ -0.38
PDLIM2-206ENST00000409141 MUC21Q5SSG8 566 aa12.65□□□□□ -0.38
PDLIM2-206ENST00000409141 Q6AWC8 147 aa12.65□□□□□ -0.38
PDLIM2-206ENST00000409141 LINC00612Q8N6U2 182 aa12.65□□□□□ -0.38
PDLIM2-206ENST00000409141 MAP1LC3BQ9GZQ8 125 aa12.65□□□□□ -0.38
PDLIM2-206ENST00000409141 FHITP49789 147 aa12.65□□□□□ -0.38
PDLIM2-206ENST00000409141 TCTE3Q8IZS6 198 aa12.65□□□□□ -0.38
PDLIM2-206ENST00000409141 STOML3Q8TAV4 291 aa12.65□□□□□ -0.38
PDLIM2-206ENST00000409141 TVP23CQ96ET8 276 aa12.65□□□□□ -0.38
PDLIM2-206ENST00000409141 UMAD1C9J7I0 102 aa12.64□□□□□ -0.39
PDLIM2-206ENST00000409141 IFNA7P01567 189 aa12.64□□□□□ -0.39
PDLIM2-206ENST00000409141 P0DMU3 169 aa12.64□□□□□ -0.39
PDLIM2-206ENST00000409141 FAM231AP0DMU4 169 aa12.64□□□□□ -0.39
PDLIM2-206ENST00000409141 FAM231CP0DMU5 169 aa12.64□□□□□ -0.39
PDLIM2-206ENST00000409141 IBA57Q5T440 356 aaKnown RBP12.64□□□□□ -0.39
PDLIM2-206ENST00000409141 Q6ZTI0 123 aa12.64□□□□□ -0.39
PDLIM2-206ENST00000409141 NDFIP1Q9BT67 221 aa12.64□□□□□ -0.39
PDLIM2-206ENST00000409141 KLF12Q9Y4X4 402 aa12.64□□□□□ -0.39
PDLIM2-206ENST00000409141 hCG_2014768A0A024R1R8 64 aa12.63□□□□□ -0.39
PDLIM2-206ENST00000409141 F6UZH7 168 aa12.63□□□□□ -0.39
PDLIM2-206ENST00000409141 TCL1AP56279 114 aa12.63□□□□□ -0.39
PDLIM2-206ENST00000409141 FAM159AQ6UWV7 190 aa12.63□□□□□ -0.39
PDLIM2-206ENST00000409141 CYB561D1Q8N8Q1 229 aa12.63□□□□□ -0.39
PDLIM2-206ENST00000409141 ATG101Q9BSB4 218 aa12.63□□□□□ -0.39
PDLIM2-206ENST00000409141 PSG8Q9UQ74 426 aa12.63□□□□□ -0.39
PDLIM2-206ENST00000409141 TRGV1A0A0A0MS02 117 aa12.62□□□□□ -0.39
PDLIM2-206ENST00000409141 FAM74A7A6NL05 159 aa12.62□□□□□ -0.39
PDLIM2-206ENST00000409141 TPT1P13693 172 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-206ENST00000409141 OR5I1Q13606 314 aa12.62□□□□□ -0.39
PDLIM2-206ENST00000409141 FAM213BQ8TBF2 198 aa12.62□□□□□ -0.39
PDLIM2-206ENST00000409141 NKX6-2Q9C056 277 aaPredicted RBP12.62□□□□□ -0.39
PDLIM2-206ENST00000409141 NAGKQ9UJ70 344 aa12.62□□□□□ -0.39
PDLIM2-206ENST00000409141 TRGV2A0A075B6R0 118 aa12.61□□□□□ -0.39
PDLIM2-206ENST00000409141 TRAV21A0A0B4J279 112 aa12.61□□□□□ -0.39
PDLIM2-206ENST00000409141 FLI1Q01543 452 aaPredicted RBP12.61□□□□□ -0.39
PDLIM2-206ENST00000409141 PRNTQ86SH4 94 aa12.61□□□□□ -0.39
PDLIM2-206ENST00000409141 TMEM75Q8N9X5 138 aa12.61□□□□□ -0.39
PDLIM2-206ENST00000409141 C15orf53Q8NAA6 179 aa12.61□□□□□ -0.39
PDLIM2-206ENST00000409141 FBLL1A6NHQ2 334 aaKnown RBP12.6□□□□□ -0.39
PDLIM2-206ENST00000409141 SPINK4O60575 86 aa12.6□□□□□ -0.39
PDLIM2-206ENST00000409141 IGLV2-11P01706 119 aa12.6□□□□□ -0.39
PDLIM2-206ENST00000409141 ZNF415Q09FC8 603 aa12.6□□□□□ -0.39
PDLIM2-206ENST00000409141 TMEM183BQ1AE95 376 aa12.6□□□□□ -0.39
PDLIM2-206ENST00000409141 LGALSLQ3ZCW2 172 aaPredicted RBP12.6□□□□□ -0.39
PDLIM2-206ENST00000409141 TMEM183AQ8IXX5 376 aa12.6□□□□□ -0.39
PDLIM2-206ENST00000409141 POM121L12Q8N7R1 296 aa12.6□□□□□ -0.39
PDLIM2-206ENST00000409141 SFT2D1Q8WV19 159 aa12.6□□□□□ -0.39
PDLIM2-206ENST00000409141 TRGV11A0A075B6L2 103 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 C1QBP02746 253 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 DPPA3Q6W0C5 159 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 AKAP14Q86UN6 197 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 UBE2DNLQ8IWF7 75 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 MBD3L1Q8WWY6 194 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 LINC00479Q96M42 142 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 C8orf49Q96NF6 230 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 MDFICQ9P1T7 246 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 TRAV34A0A0B4J273 112 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 PEX7O00628 323 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 NUDT3O95989 172 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 PPT1P50897 306 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 TDRG1Q3Y452 100 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 ZFP69Q49AA0 526 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 SAPCD1Q5SSQ6 148 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 CST9LP1Q5W188 147 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 HIST1H2BAQ96A08 127 aa12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 MRPL16Q9NX20 251 aaKnown RBP12.59□□□□□ -0.39
PDLIM2-206ENST00000409141 VPS13DQ5THJ4 4388 aa12.58□□□□□ -0.4
PDLIM2-206ENST00000409141 A0A1B0GV50 99 aa12.58□□□□□ -0.4
PDLIM2-206ENST00000409141 GNRH2O43555 120 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms