RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ATP6V0E2Q8NHE4 81 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 TMEM170AQ8WVE7 144 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 VWC2LB2RUY7 222 aa3.9□□□□□ -1.78
SCN3A-203ENST00000409101 ZNF48Q96MX3 618 aaPredicted RBP3.9□□□□□ -1.78
SCN3A-203ENST00000409101 NDUFAF3Q9BU61 184 aa3.9□□□□□ -1.78
SCN3A-203ENST00000409101 FGF23Q9GZV9 251 aaPredicted RBP3.9□□□□□ -1.78
SCN3A-203ENST00000409101 MEGF9Q9H1U4 602 aa3.9□□□□□ -1.78
SCN3A-203ENST00000409101 KLF5Q13887 457 aaPredicted RBP3.9□□□□□ -1.78
SCN3A-203ENST00000409101 C11orf71Q6IPW1 123 aa3.9□□□□□ -1.78
SCN3A-203ENST00000409101 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.9□□□□□ -1.78
SCN3A-203ENST00000409101 CYTL1Q9NRR1 136 aa3.9□□□□□ -1.78
SCN3A-203ENST00000409101 TMEM131Q92545 1883 aa3.9□□□□□ -1.79
SCN3A-203ENST00000409101 NOTCH4Q99466 2003 aa3.9□□□□□ -1.79
SCN3A-203ENST00000409101 SDHAF1A6NFY7 115 aa3.9□□□□□ -1.79
SCN3A-203ENST00000409101 I3L2K1 104 aa3.9□□□□□ -1.79
SCN3A-203ENST00000409101 OVOL2Q9BRP0 275 aa3.9□□□□□ -1.79
SCN3A-203ENST00000409101 ESM1Q9NQ30 184 aa3.9□□□□□ -1.79
SCN3A-203ENST00000409101 TMEM213A2RRL7 107 aa3.9□□□□□ -1.79
SCN3A-203ENST00000409101 EDA2RQ9HAV5 297 aa3.9□□□□□ -1.79
SCN3A-203ENST00000409101 KLF12Q9Y4X4 402 aa3.9□□□□□ -1.79
SCN3A-203ENST00000409101 AHCTF1Q8WYP5 2266 aa3.9□□□□□ -1.79
SCN3A-203ENST00000409101 ODF3BA8MYP8 253 aa3.9□□□□□ -1.79
SCN3A-203ENST00000409101 IFITM2Q01629 132 aa3.9□□□□□ -1.79
SCN3A-203ENST00000409101 LINC01551Q86U37 167 aa3.9□□□□□ -1.79
SCN3A-203ENST00000409101 RSPO3Q9BXY4 272 aaPredicted RBP3.9□□□□□ -1.79
SCN3A-203ENST00000409101 GNRH2O43555 120 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 PFN2P35080 140 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 TTC32Q5I0X7 151 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 Q6ZSV7 163 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 DYNAPQ8N1N2 210 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 LINC00479Q96M42 142 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 TRAV26-2A0A0B4J265 109 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 XCL1P47992 114 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 ZNF503Q96F45 646 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 SNHG12Q9BXW3 62 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 HHLA3Q9XRX5 114 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 LYL1P12980 280 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 HLA-DMBP28068 263 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 SRSF3P84103 164 aaKnown RBP3.89□□□□□ -1.79
SCN3A-203ENST00000409101 Q8N8P6 123 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 DNAJC30Q96LL9 226 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 TECTAO75443 2155 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 PLP1P60201 277 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 HERVK_113P63121 156 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 FXYD5Q96DB9 178 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 C14orf144Q96I85 54 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 DOCK8Q8NF50 2099 aa3.89□□□□□ -1.79
SCN3A-203ENST00000409101 IGLV1-47P01700 117 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 CTSGP08311 255 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 ATXN8Q156A1 80 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 MSMPQ1L6U9 139 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 ADAMTSL5Q6ZMM2 481 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 ERG28Q9UKR5 140 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 PI4KAP42356 2102 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 K7EIM0 57 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 NXPH4O95158 308 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 IGHG4P01861 327 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 RPL32P62910 135 aaKnown RBP3.88□□□□□ -1.79
SCN3A-203ENST00000409101 LENEPQ9Y5L5 61 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 DMRT1Q9Y5R6 373 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 FER1L5A0AVI2 2057 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 RP1L1Q8IWN7 2480 aaPredicted RBP3.88□□□□□ -1.79
SCN3A-203ENST00000409101 SEC16AO15027 2179 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 C14orf177Q52M58 125 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 C17orf77Q96MU5 243 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 MAP6D1Q9H9H5 199 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 FAM231BA6NCW3 169 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 FSTL3O95633 263 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 CRYGCP07315 174 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 CT83Q5H943 113 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 CHAC1Q9BUX1 264 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 AGPAT4-IT1Q9H0P7 198 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 ASXL3Q9C0F0 2248 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 ESPL1Q14674 2120 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 NEGR1Q7Z3B1 354 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 ZC2HC1AQ96GY0 325 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 CAMK2N2Q96S95 79 aa3.88□□□□□ -1.79
SCN3A-203ENST00000409101 A0A1B0GV72 72 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 BUB3O43684 328 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 DAZ2Q13117 558 aaKnown RBP3.87□□□□□ -1.79
SCN3A-203ENST00000409101 FAM104BQ5XKR9 115 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 C2orf66Q6UXQ4 117 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 DAZ4Q86SG3 579 aaKnown RBP3.87□□□□□ -1.79
SCN3A-203ENST00000409101 C10orf126Q8N4M7 172 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 SMR3AQ99954 134 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 C20orf144Q9BQM9 153 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 DAZ3Q9NR90 486 aaKnown RBP3.87□□□□□ -1.79
SCN3A-203ENST00000409101 FANCD2OSQ96PS1 177 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 FNDC4Q9H6D8 234 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-203ENST00000409101 HEATR5BQ9P2D3 2071 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 MDC1Q14676 2089 aaKnown RBP3.87□□□□□ -1.79
SCN3A-203ENST00000409101 TEX22C9J3V5 150 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 TAL2Q16559 108 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 Q6ZSR3 168 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 ZNF625Q96I27 306 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-203ENST00000409101 EP300Q09472 2414 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-203ENST00000409101 WI2-2373I1.2A0A1W2PRP0 233 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 LGALS9O00182 355 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 FAM110AQ9BQ89 295 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 NHP2Q9NX24 153 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms