RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 GATA4P43694 442 aa17.38■□□□□ 0.37
CUEDC1-202ENST00000407144 RNF7Q9UBF6 113 aa17.38■□□□□ 0.37
CUEDC1-202ENST00000407144 FRYQ5TBA9 3013 aa17.37■□□□□ 0.37
CUEDC1-202ENST00000407144 SLC25A20O43772 301 aa17.37■□□□□ 0.37
CUEDC1-202ENST00000407144 CRLF1O75462 422 aa17.37■□□□□ 0.37
CUEDC1-202ENST00000407144 DTX2Q86UW9 622 aa17.37■□□□□ 0.37
CUEDC1-202ENST00000407144 LINC01600Q96MT4 127 aa17.37■□□□□ 0.37
CUEDC1-202ENST00000407144 VPREB3Q9UKI3 123 aa17.37■□□□□ 0.37
CUEDC1-202ENST00000407144 GATA1P15976 413 aaPredicted RBP17.36■□□□□ 0.37
CUEDC1-202ENST00000407144 SFTA2Q6UW10 78 aa17.36■□□□□ 0.37
CUEDC1-202ENST00000407144 ZNF815PA8K554 130 aa17.36■□□□□ 0.37
CUEDC1-202ENST00000407144 IGKV1-17P01599 117 aa17.36■□□□□ 0.37
CUEDC1-202ENST00000407144 LINC00311Q8N616 119 aa17.36■□□□□ 0.37
CUEDC1-202ENST00000407144 C8orf31Q8N9H6 132 aa17.36■□□□□ 0.37
CUEDC1-202ENST00000407144 PRR14LQ5THK1 2151 aa17.36■□□□□ 0.37
CUEDC1-202ENST00000407144 IGHV1-18A0A0C4DH31 117 aa17.35■□□□□ 0.37
CUEDC1-202ENST00000407144 COX6B1P14854 86 aa17.35■□□□□ 0.37
CUEDC1-202ENST00000407144 C6orf15Q6UXA7 325 aaPredicted RBP17.35■□□□□ 0.37
CUEDC1-202ENST00000407144 C10orf126Q8N4M7 172 aa17.35■□□□□ 0.37
CUEDC1-202ENST00000407144 CCL13Q99616 98 aa17.35■□□□□ 0.37
CUEDC1-202ENST00000407144 PRADC1Q9BSG0 188 aa17.35■□□□□ 0.37
CUEDC1-202ENST00000407144 SPRR3Q9UBC9 169 aa17.35■□□□□ 0.37
CUEDC1-202ENST00000407144 I3L2K1 104 aa17.35■□□□□ 0.37
CUEDC1-202ENST00000407144 SCGB1D4Q6XE38 83 aa17.35■□□□□ 0.37
CUEDC1-202ENST00000407144 RASL10AQ92737 203 aa17.35■□□□□ 0.37
CUEDC1-202ENST00000407144 CEP295Q9C0D2 2601 aa17.34■□□□□ 0.37
CUEDC1-202ENST00000407144 MRPL23Q16540 153 aaKnown RBP17.34■□□□□ 0.37
CUEDC1-202ENST00000407144 MEIG1Q5JSS6 88 aa17.34■□□□□ 0.37
CUEDC1-202ENST00000407144 NRACQ8N912 160 aa17.34■□□□□ 0.37
CUEDC1-202ENST00000407144 ZNF80P51504 273 aaPredicted RBP17.33■□□□□ 0.37
CUEDC1-202ENST00000407144 MSMPQ1L6U9 139 aa17.33■□□□□ 0.37
CUEDC1-202ENST00000407144 IL17RELQ6ZVW7 336 aa17.33■□□□□ 0.37
CUEDC1-202ENST00000407144 FAM216BQ8N7L0 139 aa17.33■□□□□ 0.37
CUEDC1-202ENST00000407144 AKAP13Q12802 2813 aa17.33■□□□□ 0.37
CUEDC1-202ENST00000407144 TRGV5A0A0B4J1U4 118 aa17.33■□□□□ 0.36
CUEDC1-202ENST00000407144 CD59P13987 128 aa17.33■□□□□ 0.36
CUEDC1-202ENST00000407144 ZNF672Q499Z4 452 aaPredicted RBP17.33■□□□□ 0.36
CUEDC1-202ENST00000407144 NEXN-AS1Q8NBZ9 246 aa17.33■□□□□ 0.36
CUEDC1-202ENST00000407144 CACNA1AO00555 2505 aa17.33■□□□□ 0.36
CUEDC1-202ENST00000407144 ZNF491Q8N8L2 437 aa17.32■□□□□ 0.36
CUEDC1-202ENST00000407144 NCOR2Q9Y618 2525 aa17.32■□□□□ 0.36
CUEDC1-202ENST00000407144 SLC25A16P16260 332 aa17.32■□□□□ 0.36
CUEDC1-202ENST00000407144 EFNA4P52798 201 aa17.32■□□□□ 0.36
CUEDC1-202ENST00000407144 SPRY4Q9C004 299 aa17.32■□□□□ 0.36
CUEDC1-202ENST00000407144 DEFB127Q9H1M4 99 aa17.32■□□□□ 0.36
CUEDC1-202ENST00000407144 J3KRW8 73 aa17.31■□□□□ 0.36
CUEDC1-202ENST00000407144 CRYGBP07316 175 aa17.31■□□□□ 0.36
CUEDC1-202ENST00000407144 PLEKHB2Q96CS7 222 aa17.31■□□□□ 0.36
CUEDC1-202ENST00000407144 HLA-DMBP28068 263 aa17.3■□□□□ 0.36
CUEDC1-202ENST00000407144 RNF125Q96EQ8 232 aa17.3■□□□□ 0.36
CUEDC1-202ENST00000407144 SPRY3O43610 288 aa17.3■□□□□ 0.36
CUEDC1-202ENST00000407144 ORM1P02763 201 aa17.3■□□□□ 0.36
CUEDC1-202ENST00000407144 CFC1BP0CG36 223 aa17.3■□□□□ 0.36
CUEDC1-202ENST00000407144 CFC1P0CG37 223 aa17.3■□□□□ 0.36
CUEDC1-202ENST00000407144 PRB4P10163 310 aaPredicted RBP17.3■□□□□ 0.36
CUEDC1-202ENST00000407144 RPL13AP40429 203 aaKnown RBP17.3■□□□□ 0.36
CUEDC1-202ENST00000407144 ODF3Q96PU9 254 aa17.3■□□□□ 0.36
CUEDC1-202ENST00000407144 IGKV2-40A0A087WW87 121 aaPredicted RBP17.29■□□□□ 0.36
CUEDC1-202ENST00000407144 TEX22C9J3V5 150 aa17.29■□□□□ 0.36
CUEDC1-202ENST00000407144 IGKV2D-40P01614 121 aaPredicted RBP17.29■□□□□ 0.36
CUEDC1-202ENST00000407144 DEFB108BQ8NET1 73 aa17.29■□□□□ 0.36
CUEDC1-202ENST00000407144 Q8N1Y9 231 aa17.29■□□□□ 0.36
CUEDC1-202ENST00000407144 RAB1BQ9H0U4 201 aa17.29■□□□□ 0.36
CUEDC1-202ENST00000407144 ONECUT1Q9UBC0 465 aa17.29■□□□□ 0.36
CUEDC1-202ENST00000407144 PRO1854Q9UHT4 67 aa17.29■□□□□ 0.36
CUEDC1-202ENST00000407144 RAI1Q7Z5J4 1906 aaPredicted RBP17.29■□□□□ 0.36
CUEDC1-202ENST00000407144 LAMA5O15230 3695 aa17.28■□□□□ 0.36
CUEDC1-202ENST00000407144 C9JAW5 83 aa17.28■□□□□ 0.36
CUEDC1-202ENST00000407144 TOMM6Q96B49 74 aa17.28■□□□□ 0.36
CUEDC1-202ENST00000407144 ZNF883P0CG24 379 aa17.28■□□□□ 0.36
CUEDC1-202ENST00000407144 ORMDL2Q53FV1 153 aa17.28■□□□□ 0.36
CUEDC1-202ENST00000407144 TEX36Q5VZQ5 186 aa17.28■□□□□ 0.36
CUEDC1-202ENST00000407144 C15orf53Q8NAA6 179 aa17.28■□□□□ 0.36
CUEDC1-202ENST00000407144 MDS2Q8NDY4 140 aa17.28■□□□□ 0.36
CUEDC1-202ENST00000407144 TRAV8-4A0A0B4J246 113 aa17.27■□□□□ 0.36
CUEDC1-202ENST00000407144 A0A0J9YY99 117 aa17.27■□□□□ 0.36
CUEDC1-202ENST00000407144 Q6ZQT7 251 aa17.27■□□□□ 0.36
CUEDC1-202ENST00000407144 SCGB3A1Q96QR1 104 aa17.27■□□□□ 0.36
CUEDC1-202ENST00000407144 VKORC1Q9BQB6 163 aa17.27■□□□□ 0.36
CUEDC1-202ENST00000407144 DEFB124Q8NES8 71 aa17.26■□□□□ 0.35
CUEDC1-202ENST00000407144 IGHV3-30P01768 117 aa17.26■□□□□ 0.35
CUEDC1-202ENST00000407144 IGHV3-30-5P0DP03 117 aa17.26■□□□□ 0.35
CUEDC1-202ENST00000407144 LY6DQ14210 128 aa17.26■□□□□ 0.35
CUEDC1-202ENST00000407144 SIGLEC9Q9Y336 463 aa17.26■□□□□ 0.35
CUEDC1-202ENST00000407144 APELAP0DMC3 54 aa17.25■□□□□ 0.35
CUEDC1-202ENST00000407144 P0DMU3 169 aa17.25■□□□□ 0.35
CUEDC1-202ENST00000407144 FAM231AP0DMU4 169 aa17.25■□□□□ 0.35
CUEDC1-202ENST00000407144 FAM231CP0DMU5 169 aa17.25■□□□□ 0.35
CUEDC1-202ENST00000407144 ID1P41134 155 aa17.25■□□□□ 0.35
CUEDC1-202ENST00000407144 NRGNQ92686 78 aa17.25■□□□□ 0.35
CUEDC1-202ENST00000407144 PPDPFQ9H3Y8 114 aa17.25■□□□□ 0.35
CUEDC1-202ENST00000407144 CTSZQ9UBR2 303 aa17.25■□□□□ 0.35
CUEDC1-202ENST00000407144 CCL3L1P16619 93 aa17.25■□□□□ 0.35
CUEDC1-202ENST00000407144 ERCC8Q13216 396 aa17.25■□□□□ 0.35
CUEDC1-202ENST00000407144 CHD8Q9HCK8 2581 aa17.24■□□□□ 0.35
CUEDC1-202ENST00000407144 NTN5Q8WTR8 489 aaPredicted RBP17.24■□□□□ 0.35
CUEDC1-202ENST00000407144 SMIM2Q9BVW6 85 aa17.24■□□□□ 0.35
CUEDC1-202ENST00000407144 CFAP47Q6ZTR5 3102 aa17.23■□□□□ 0.35
CUEDC1-202ENST00000407144 ENSAO43768 121 aaKnown RBP17.23■□□□□ 0.35
CUEDC1-202ENST00000407144 CNEP1R1Q8N9A8 125 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms