RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ZNF738Q8NE65 137 aa12.86□□□□□ -0.35
NUP50-203ENST00000407019 GOLT1BQ9Y3E0 138 aa12.85□□□□□ -0.35
NUP50-203ENST00000407019 FOXE3Q13461 319 aa12.85□□□□□ -0.35
NUP50-203ENST00000407019 C20orf173Q96LM9 149 aa12.85□□□□□ -0.35
NUP50-203ENST00000407019 TMEM8BA6NDV4 472 aa12.84□□□□□ -0.35
NUP50-203ENST00000407019 IGHV3-11P01762 117 aa12.84□□□□□ -0.35
NUP50-203ENST00000407019 PF4V1P10720 104 aa12.84□□□□□ -0.35
NUP50-203ENST00000407019 FXYD7P58549 80 aa12.84□□□□□ -0.35
NUP50-203ENST00000407019 LGALS9BQ3B8N2 356 aa12.84□□□□□ -0.35
NUP50-203ENST00000407019 LGALS9CQ6DKI2 356 aa12.84□□□□□ -0.35
NUP50-203ENST00000407019 LENEPQ9Y5L5 61 aa12.84□□□□□ -0.35
NUP50-203ENST00000407019 IGHV7-4-1A0A0J9YVY3 117 aa12.84□□□□□ -0.35
NUP50-203ENST00000407019 NPSP0C0P6 89 aa12.84□□□□□ -0.35
NUP50-203ENST00000407019 GPHB5Q86YW7 130 aa12.84□□□□□ -0.35
NUP50-203ENST00000407019 TNFRSF6BO95407 300 aa12.83□□□□□ -0.36
NUP50-203ENST00000407019 BLCAPP62952 87 aa12.83□□□□□ -0.36
NUP50-203ENST00000407019 ZNF124Q15973 351 aa12.83□□□□□ -0.36
NUP50-203ENST00000407019 IFI27L1Q96BM0 104 aa12.83□□□□□ -0.36
NUP50-203ENST00000407019 NPFFR1Q9GZQ6 430 aa12.83□□□□□ -0.36
NUP50-203ENST00000407019 KLK15Q9H2R5 256 aa12.83□□□□□ -0.36
NUP50-203ENST00000407019 NXT2Q9NPJ8 142 aaKnown RBP12.83□□□□□ -0.36
NUP50-203ENST00000407019 CACNA1BQ00975 2339 aa12.82□□□□□ -0.36
NUP50-203ENST00000407019 SVEP1Q4LDE5 3571 aa12.82□□□□□ -0.36
NUP50-203ENST00000407019 LINC01546A6NGU7 62 aa12.82□□□□□ -0.36
NUP50-203ENST00000407019 B4DSR2 109 aa12.82□□□□□ -0.36
NUP50-203ENST00000407019 GAS8-AS1O95177 125 aa12.82□□□□□ -0.36
NUP50-203ENST00000407019 SMIM15Q7Z3B0 74 aa12.82□□□□□ -0.36
NUP50-203ENST00000407019 OR4X2Q8NGF9 303 aa12.82□□□□□ -0.36
NUP50-203ENST00000407019 SOCS3O14543 225 aa12.82□□□□□ -0.36
NUP50-203ENST00000407019 CACNG7P62955 275 aa12.82□□□□□ -0.36
NUP50-203ENST00000407019 OVOL1O14753 267 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 SNAI2O43623 268 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 COX8AP10176 69 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 EVI2AP22794 236 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 MPV17L2Q567V2 206 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 PRR9Q5T870 116 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 Q6ZS46 218 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 OR10J6PQ8NGY7 276 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 DPF1Q92782 380 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 LINC00477Q96M19 166 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 A0A0G2JLM5 398 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 IGLV1-40P01703 118 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 DSCR9P59020 149 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 Q6ZQT7 251 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 ORAOV1Q8WV07 137 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 SPOCK3Q9BQ16 436 aa12.81□□□□□ -0.36
NUP50-203ENST00000407019 IGHV4-4A0A075B6R2 117 aa12.8□□□□□ -0.36
NUP50-203ENST00000407019 AVPP01185 164 aa12.8□□□□□ -0.36
NUP50-203ENST00000407019 PKD1L2Q7Z442 2459 aa12.79□□□□□ -0.36
NUP50-203ENST00000407019 GATA1P15976 413 aaPredicted RBP12.79□□□□□ -0.36
NUP50-203ENST00000407019 SPANXN1Q5VSR9 72 aa12.79□□□□□ -0.36
NUP50-203ENST00000407019 LCNL1Q6ZST4 164 aa12.79□□□□□ -0.36
NUP50-203ENST00000407019 COX11Q9Y6N1 276 aa12.79□□□□□ -0.36
NUP50-203ENST00000407019 NUDT3O95989 172 aa12.79□□□□□ -0.36
NUP50-203ENST00000407019 GATA3P23771 443 aa12.79□□□□□ -0.36
NUP50-203ENST00000407019 FCER1GP30273 86 aa12.79□□□□□ -0.36
NUP50-203ENST00000407019 LEPP41159 167 aa12.79□□□□□ -0.36
NUP50-203ENST00000407019 RPL11P62913 178 aaKnown RBP12.79□□□□□ -0.36
NUP50-203ENST00000407019 C12orf54Q6X4T0 127 aa12.79□□□□□ -0.36
NUP50-203ENST00000407019 OR2K2Q8NGT1 345 aa12.79□□□□□ -0.36
NUP50-203ENST00000407019 UFC1Q9Y3C8 167 aa12.79□□□□□ -0.36
NUP50-203ENST00000407019 H3BVH4 76 aa12.78□□□□□ -0.36
NUP50-203ENST00000407019 J3KRW8 73 aa12.78□□□□□ -0.36
NUP50-203ENST00000407019 CFHR3Q02985 330 aa12.78□□□□□ -0.36
NUP50-203ENST00000407019 ANKRD39Q53RE8 183 aa12.78□□□□□ -0.36
NUP50-203ENST00000407019 BVES-AS1Q5T3Y7 98 aa12.78□□□□□ -0.36
NUP50-203ENST00000407019 ZFAND2AQ8N6M9 145 aa12.78□□□□□ -0.36
NUP50-203ENST00000407019 Q8N8P6 123 aa12.78□□□□□ -0.36
NUP50-203ENST00000407019 OR1N2Q8NGR9 330 aa12.78□□□□□ -0.36
NUP50-203ENST00000407019 WFDC3Q8IUB2 231 aa12.77□□□□□ -0.36
NUP50-203ENST00000407019 RHPN1-AS1Q9BWJ2 59 aa12.77□□□□□ -0.36
NUP50-203ENST00000407019 TRAV21A0A0B4J279 112 aa12.77□□□□□ -0.37
NUP50-203ENST00000407019 Q6ZVH6 145 aa12.77□□□□□ -0.37
NUP50-203ENST00000407019 SLC25A16P16260 332 aa12.76□□□□□ -0.37
NUP50-203ENST00000407019 TM4SF20Q53R12 229 aa12.76□□□□□ -0.37
NUP50-203ENST00000407019 NRGNQ92686 78 aa12.76□□□□□ -0.37
NUP50-203ENST00000407019 C18orf15Q96N68 181 aa12.76□□□□□ -0.37
NUP50-203ENST00000407019 DAZ1Q9NQZ3 744 aaKnown RBP12.76□□□□□ -0.37
NUP50-203ENST00000407019 ZNF580Q9UK33 172 aa12.76□□□□□ -0.37
NUP50-203ENST00000407019 IGLV2-18A0A075B6J9 118 aa12.76□□□□□ -0.37
NUP50-203ENST00000407019 C2orf91Q6ZV80 131 aa12.76□□□□□ -0.37
NUP50-203ENST00000407019 PRSS47A8MTI9 375 aa12.75□□□□□ -0.37
NUP50-203ENST00000407019 DEFB1P60022 68 aa12.75□□□□□ -0.37
NUP50-203ENST00000407019 NRACQ8N912 160 aa12.75□□□□□ -0.37
NUP50-203ENST00000407019 IGKV3-7A0A075B6H7 116 aa12.74□□□□□ -0.37
NUP50-203ENST00000407019 TRAV26-2A0A0B4J265 109 aa12.74□□□□□ -0.37
NUP50-203ENST00000407019 FGF6P10767 208 aa12.74□□□□□ -0.37
NUP50-203ENST00000407019 TMEM158Q8WZ71 300 aa12.74□□□□□ -0.37
NUP50-203ENST00000407019 FAM19A4Q96LR4 140 aa12.74□□□□□ -0.37
NUP50-203ENST00000407019 PEF1Q9UBV8 284 aaKnown RBP12.74□□□□□ -0.37
NUP50-203ENST00000407019 DEFB125Q8N687 156 aa12.74□□□□□ -0.37
NUP50-203ENST00000407019 LINC01356Q8N9X3 169 aa12.74□□□□□ -0.37
NUP50-203ENST00000407019 MRAP2Q96G30 205 aa12.74□□□□□ -0.37
NUP50-203ENST00000407019 SMPXQ9UHP9 88 aa12.74□□□□□ -0.37
NUP50-203ENST00000407019 F6UB75 175 aa12.73□□□□□ -0.37
NUP50-203ENST00000407019 K7EMT4 169 aa12.73□□□□□ -0.37
NUP50-203ENST00000407019 ASIPP42127 132 aa12.73□□□□□ -0.37
NUP50-203ENST00000407019 TMEM95Q3KNT9 176 aa12.73□□□□□ -0.37
NUP50-203ENST00000407019 DKK2Q9UBU2 259 aa12.73□□□□□ -0.37
NUP50-203ENST00000407019 TRBV7-9A0A0J9YWB2 115 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms