RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 D6R8Y8 96 aa13.5□□□□□ -0.25
HLA-DQB1-204ENST00000399084 SMAD7O15105 426 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-204ENST00000399084 TRBV12-3P01733 135 aa13.5□□□□□ -0.25
HLA-DQB1-204ENST00000399084 CKS2P33552 79 aa13.5□□□□□ -0.25
HLA-DQB1-204ENST00000399084 PRSS57Q6UWY2 283 aa13.5□□□□□ -0.25
HLA-DQB1-204ENST00000399084 AMN1Q8IY45 258 aa13.5□□□□□ -0.25
HLA-DQB1-204ENST00000399084 IGLC3P0DOY3 106 aa13.49□□□□□ -0.25
HLA-DQB1-204ENST00000399084 SRSF1Q07955 248 aaKnown RBP eCLIP13.49□□□□□ -0.25
HLA-DQB1-204ENST00000399084 TEX29Q8N6K0 151 aa13.49□□□□□ -0.25
HLA-DQB1-204ENST00000399084 NRGNQ92686 78 aa13.49□□□□□ -0.25
HLA-DQB1-204ENST00000399084 RHPN1-AS1Q9BWJ2 59 aa13.49□□□□□ -0.25
HLA-DQB1-204ENST00000399084 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.49□□□□□ -0.25
HLA-DQB1-204ENST00000399084 IGKV3D-20A0A0C4DH25 116 aa13.48□□□□□ -0.25
HLA-DQB1-204ENST00000399084 IGHV4-59P01825 116 aa13.48□□□□□ -0.25
HLA-DQB1-204ENST00000399084 ID1P41134 155 aa13.48□□□□□ -0.25
HLA-DQB1-204ENST00000399084 DEFB113Q30KQ7 82 aa13.48□□□□□ -0.25
HLA-DQB1-204ENST00000399084 Q6YL49 198 aa13.48□□□□□ -0.25
HLA-DQB1-204ENST00000399084 VPREB3Q9UKI3 123 aa13.48□□□□□ -0.25
HLA-DQB1-204ENST00000399084 TRAV21A0A0B4J279 112 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 SNAI2O43623 268 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 TCF21O43680 179 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 IGHV3-11P01762 117 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 ELANEP08246 267 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 Q6ZS46 218 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 APRG1Q8IVJ8 170 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 ST20Q9HBF5 79 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 ZMAT5Q9UDW3 170 aaKnown RBP13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 LINC01546A6NGU7 62 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 CYSRT1A8MQ03 144 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 M0QZ24 198 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 DEFB125Q8N687 156 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 SNHG12Q9BXW3 62 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 SIGLEC8Q9NYZ4 499 aa13.47□□□□□ -0.25
HLA-DQB1-204ENST00000399084 CSN3P07498 182 aa13.46□□□□□ -0.25
HLA-DQB1-204ENST00000399084 IGHV4-31P0DP07 118 aa13.46□□□□□ -0.25
HLA-DQB1-204ENST00000399084 MED14OSP0DP75 135 aa13.46□□□□□ -0.25
HLA-DQB1-204ENST00000399084 PLA2G2AP14555 144 aa13.46□□□□□ -0.25
HLA-DQB1-204ENST00000399084 ZNF747Q9BV97 191 aa13.46□□□□□ -0.25
HLA-DQB1-204ENST00000399084 USP9XQ93008 2570 aaPredicted RBP13.46□□□□□ -0.26
HLA-DQB1-204ENST00000399084 NAV2Q8IVL1 2488 aa13.45□□□□□ -0.26
HLA-DQB1-204ENST00000399084 OR4C46A6NHA9 309 aa13.45□□□□□ -0.26
HLA-DQB1-204ENST00000399084 PRB4P10163 310 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQB1-204ENST00000399084 FAM19A4Q96LR4 140 aa13.45□□□□□ -0.26
HLA-DQB1-204ENST00000399084 MAP1LC3AQ9H492 121 aa13.45□□□□□ -0.26
HLA-DQB1-204ENST00000399084 NXT2Q9NPJ8 142 aaKnown RBP13.45□□□□□ -0.26
HLA-DQB1-204ENST00000399084 HSBP1L1C9JCN9 74 aa13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 IFI27P40305 119 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 TENM4Q6N022 2769 aa13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 OR8A1Q8NGG7 326 aa13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 C20orf173Q96LM9 149 aa13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 MS4A6AQ9H2W1 248 aa13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 MRPS16Q9Y3D3 137 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 PRSS47A8MTI9 375 aa13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 RNF223E7ERA6 249 aa13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 LGALS9O00182 355 aa13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 LINC01545Q5VT33 79 aa13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 RNF152Q8N8N0 203 aa13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 MYOZ3Q8TDC0 251 aa13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 RNF185Q96GF1 192 aa13.44□□□□□ -0.26
HLA-DQB1-204ENST00000399084 RPL11P62913 178 aaKnown RBP13.43□□□□□ -0.26
HLA-DQB1-204ENST00000399084 PSMG4Q5JS54 123 aa13.43□□□□□ -0.26
HLA-DQB1-204ENST00000399084 ZFAND2AQ8N6M9 145 aa13.43□□□□□ -0.26
HLA-DQB1-204ENST00000399084 C11orf21Q9P2W6 132 aa13.43□□□□□ -0.26
HLA-DQB1-204ENST00000399084 HBDP02042 147 aa13.42□□□□□ -0.26
HLA-DQB1-204ENST00000399084 SSTP61278 116 aa13.42□□□□□ -0.26
HLA-DQB1-204ENST00000399084 TM4SF20Q53R12 229 aa13.42□□□□□ -0.26
HLA-DQB1-204ENST00000399084 PRR31Q5SQ13 230 aa13.42□□□□□ -0.26
HLA-DQB1-204ENST00000399084 DPF1Q92782 380 aa13.42□□□□□ -0.26
HLA-DQB1-204ENST00000399084 UBE2E2Q96LR5 201 aa13.42□□□□□ -0.26
HLA-DQB1-204ENST00000399084 ODF3Q96PU9 254 aa13.42□□□□□ -0.26
HLA-DQB1-204ENST00000399084 SPG11Q96JI7 2443 aa13.42□□□□□ -0.26
HLA-DQB1-204ENST00000399084 EREGO14944 169 aa13.41□□□□□ -0.26
HLA-DQB1-204ENST00000399084 NPYP01303 97 aa13.41□□□□□ -0.26
HLA-DQB1-204ENST00000399084 HNRNPA3P51991 378 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB1-204ENST00000399084 NUTF2P61970 127 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB1-204ENST00000399084 Q5PR19 223 aa13.41□□□□□ -0.26
HLA-DQB1-204ENST00000399084 Q6ZN92 141 aa13.41□□□□□ -0.26
HLA-DQB1-204ENST00000399084 ZNF462Q96JM2 2506 aa13.41□□□□□ -0.26
HLA-DQB1-204ENST00000399084 A1L4Q6 167 aa13.4□□□□□ -0.26
HLA-DQB1-204ENST00000399084 LGALS1P09382 135 aaKnown RBP13.4□□□□□ -0.26
HLA-DQB1-204ENST00000399084 IGLL1P15814 213 aa13.4□□□□□ -0.26
HLA-DQB1-204ENST00000399084 SPANXN1Q5VSR9 72 aa13.4□□□□□ -0.26
HLA-DQB1-204ENST00000399084 MRAP2Q96G30 205 aa13.4□□□□□ -0.26
HLA-DQB1-204ENST00000399084 MSRB1Q9NZV6 116 aa13.4□□□□□ -0.26
HLA-DQB1-204ENST00000399084 A0A1B0GV90 55 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 TNFRSF6BO95407 300 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 LINC00173Q6ZV60 143 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 Q8N2B8 174 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 FLNCQ14315 2725 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 MUC21A0A0G2JKD1 596 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 MUC21A0A140T8X8 626 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 LOC389332A0A1B0GUA5 103 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 ASIPP42127 132 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 LGALS9BQ3B8N2 356 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 MUC21Q5SSG8 566 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 LGALS9CQ6DKI2 356 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 ATOH7Q8N100 152 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 DCANP1Q8TF63 244 aa13.39□□□□□ -0.27
HLA-DQB1-204ENST00000399084 TSPOP30536 169 aa13.38□□□□□ -0.27
HLA-DQB1-204ENST00000399084 TMEM86BQ8N661 226 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms