RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 H3BMM0 161 aa10.53□□□□□ -0.72
SKA1-202ENST00000398452 J3KRW8 73 aa10.53□□□□□ -0.72
SKA1-202ENST00000398452 AMBPP02760 352 aa10.53□□□□□ -0.72
SKA1-202ENST00000398452 MT-ND4LP03901 98 aa10.53□□□□□ -0.72
SKA1-202ENST00000398452 ERVFC1-1P60608 527 aa10.53□□□□□ -0.72
SKA1-202ENST00000398452 ASCL2Q99929 193 aa10.53□□□□□ -0.72
SKA1-202ENST00000398452 AURKAIP1Q9NWT8 199 aaPredicted RBP10.53□□□□□ -0.72
SKA1-202ENST00000398452 TRBV20OR9-2A0A075B6H5 130 aa10.52□□□□□ -0.73
SKA1-202ENST00000398452 PPP1R2P9O14990 202 aa10.52□□□□□ -0.73
SKA1-202ENST00000398452 GCGP01275 180 aa10.52□□□□□ -0.73
SKA1-202ENST00000398452 CDKN1BP46527 198 aa10.52□□□□□ -0.73
SKA1-202ENST00000398452 ZNF124Q15973 351 aa10.52□□□□□ -0.73
SKA1-202ENST00000398452 FAM162BQ5T6X4 162 aa10.52□□□□□ -0.73
SKA1-202ENST00000398452 C8orf49Q96NF6 230 aa10.52□□□□□ -0.73
SKA1-202ENST00000398452 SRD5A3Q9H8P0 318 aa10.52□□□□□ -0.73
SKA1-202ENST00000398452 NOTCH3Q9UM47 2321 aa10.52□□□□□ -0.73
SKA1-202ENST00000398452 FABP5P3A8MUU1 101 aa10.51□□□□□ -0.73
SKA1-202ENST00000398452 P01737 135 aa10.51□□□□□ -0.73
SKA1-202ENST00000398452 RNASE4P34096 147 aaKnown RBP10.51□□□□□ -0.73
SKA1-202ENST00000398452 RHEBQ15382 184 aa10.51□□□□□ -0.73
SKA1-202ENST00000398452 IBA57Q5T440 356 aaKnown RBP10.51□□□□□ -0.73
SKA1-202ENST00000398452 MORN3Q6PF18 240 aaPredicted RBP10.51□□□□□ -0.73
SKA1-202ENST00000398452 DEFB125Q8N687 156 aa10.51□□□□□ -0.73
SKA1-202ENST00000398452 CLRN3Q8NCR9 226 aa10.51□□□□□ -0.73
SKA1-202ENST00000398452 OR10G8Q8NGN5 311 aa10.51□□□□□ -0.73
SKA1-202ENST00000398452 CLUHP3Q96NS8 147 aa10.51□□□□□ -0.73
SKA1-202ENST00000398452 RPS10P5Q9NQ39 176 aa10.51□□□□□ -0.73
SKA1-202ENST00000398452 CMYA5Q8N3K9 4069 aa10.51□□□□□ -0.73
SKA1-202ENST00000398452 TRAV21A0A0B4J279 112 aa10.5□□□□□ -0.73
SKA1-202ENST00000398452 G3V4G9 280 aa10.5□□□□□ -0.73
SKA1-202ENST00000398452 GATCO43716 136 aaKnown RBP10.5□□□□□ -0.73
SKA1-202ENST00000398452 CRISP2P16562 243 aa10.5□□□□□ -0.73
SKA1-202ENST00000398452 RPL35AP18077 110 aaKnown RBP10.5□□□□□ -0.73
SKA1-202ENST00000398452 EGFEM1PQ0D2K5 195 aa10.5□□□□□ -0.73
SKA1-202ENST00000398452 OR5I1Q13606 314 aa10.5□□□□□ -0.73
SKA1-202ENST00000398452 SPINK13Q1W4C9 94 aa10.5□□□□□ -0.73
SKA1-202ENST00000398452 TRPT1Q86TN4 253 aaKnown RBP10.5□□□□□ -0.73
SKA1-202ENST00000398452 ISOC2Q96AB3 205 aa10.5□□□□□ -0.73
SKA1-202ENST00000398452 ANAPC16Q96DE5 110 aa10.5□□□□□ -0.73
SKA1-202ENST00000398452 ZC2HC1AQ96GY0 325 aa10.5□□□□□ -0.73
SKA1-202ENST00000398452 SFRP2Q96HF1 295 aa10.5□□□□□ -0.73
SKA1-202ENST00000398452 MLST8Q9BVC4 326 aa10.5□□□□□ -0.73
SKA1-202ENST00000398452 C1QTNF4Q9BXJ3 329 aa10.5□□□□□ -0.73
SKA1-202ENST00000398452 XKRY2A2RUG3 117 aa10.49□□□□□ -0.73
SKA1-202ENST00000398452 ZNF705GA8MUZ8 300 aaPredicted RBP10.49□□□□□ -0.73
SKA1-202ENST00000398452 H7BYZ3 331 aa10.49□□□□□ -0.73
SKA1-202ENST00000398452 IGLV2-8P01709 118 aa10.49□□□□□ -0.73
SKA1-202ENST00000398452 PRB2P02812 416 aaPredicted RBP10.49□□□□□ -0.73
SKA1-202ENST00000398452 PFN1P07737 140 aaKnown RBP10.49□□□□□ -0.73
SKA1-202ENST00000398452 CTDSP1Q9GZU7 261 aa10.49□□□□□ -0.73
SKA1-202ENST00000398452 WFDC10AQ9H1F0 79 aa10.49□□□□□ -0.73
SKA1-202ENST00000398452 OSTCQ9NRP0 149 aa10.49□□□□□ -0.73
SKA1-202ENST00000398452 C19orf73Q9NVV2 129 aa10.49□□□□□ -0.73
SKA1-202ENST00000398452 LOC102724200A0A096LPH7 203 aaPredicted RBP10.48□□□□□ -0.73
SKA1-202ENST00000398452 C7orf71A4D174 169 aa10.48□□□□□ -0.73
SKA1-202ENST00000398452 K7EN84 100 aa10.48□□□□□ -0.73
SKA1-202ENST00000398452 M0R2Z0 102 aa10.48□□□□□ -0.73
SKA1-202ENST00000398452 INSP01308 110 aa10.48□□□□□ -0.73
SKA1-202ENST00000398452 APOC4P55056 127 aa10.48□□□□□ -0.73
SKA1-202ENST00000398452 FXYD7P58549 80 aa10.48□□□□□ -0.73
SKA1-202ENST00000398452 FAM231DQ6ZW35 169 aa10.48□□□□□ -0.73
SKA1-202ENST00000398452 COX8CQ7Z4L0 72 aa10.48□□□□□ -0.73
SKA1-202ENST00000398452 FAM19A4Q96LR4 140 aa10.48□□□□□ -0.73
SKA1-202ENST00000398452 TMEM208Q9BTX3 173 aa10.48□□□□□ -0.73
SKA1-202ENST00000398452 SORL1Q92673 2214 aa10.48□□□□□ -0.73
SKA1-202ENST00000398452 C7orf77A4D0Y5 90 aa10.47□□□□□ -0.73
SKA1-202ENST00000398452 TMEM189A5PLL7 270 aa10.47□□□□□ -0.73
SKA1-202ENST00000398452 A8MTW9 85 aa10.47□□□□□ -0.73
SKA1-202ENST00000398452 KLLNB2CW77 178 aa10.47□□□□□ -0.73
SKA1-202ENST00000398452 SH2D1AO60880 128 aa10.47□□□□□ -0.73
SKA1-202ENST00000398452 ORM1P02763 201 aa10.47□□□□□ -0.73
SKA1-202ENST00000398452 RPS20P60866 119 aaKnown RBP10.47□□□□□ -0.73
SKA1-202ENST00000398452 BTN1A1Q13410 526 aa10.47□□□□□ -0.73
SKA1-202ENST00000398452 RNF212Q495C1 297 aa10.47□□□□□ -0.73
SKA1-202ENST00000398452 Q8N3U1 123 aa10.47□□□□□ -0.73
SKA1-202ENST00000398452 ZFAND2AQ8N6M9 145 aa10.47□□□□□ -0.73
SKA1-202ENST00000398452 NUDT10Q8NFP7 164 aa10.47□□□□□ -0.73
SKA1-202ENST00000398452 NUDT11Q96G61 164 aa10.47□□□□□ -0.73
SKA1-202ENST00000398452 RNASE7Q9H1E1 156 aaKnown RBP10.47□□□□□ -0.73
SKA1-202ENST00000398452 NAGKQ9UJ70 344 aa10.47□□□□□ -0.73
SKA1-202ENST00000398452 TRAV12-2A0A075B6T6 113 aa10.46□□□□□ -0.73
SKA1-202ENST00000398452 TRAV12-3A0A0B4J271 114 aa10.46□□□□□ -0.73
SKA1-202ENST00000398452 S100PP25815 95 aa10.46□□□□□ -0.73
SKA1-202ENST00000398452 FAM159AQ6UWV7 190 aa10.46□□□□□ -0.73
SKA1-202ENST00000398452 AMTNQ6UX39 209 aa10.46□□□□□ -0.73
SKA1-202ENST00000398452 OR2D3Q8NGH3 330 aa10.46□□□□□ -0.73
SKA1-202ENST00000398452 KCNS1Q96KK3 526 aa10.46□□□□□ -0.73
SKA1-202ENST00000398452 C20orf144Q9BQM9 153 aa10.46□□□□□ -0.73
SKA1-202ENST00000398452 CSTL1Q9H114 145 aa10.46□□□□□ -0.73
SKA1-202ENST00000398452 RPP21Q9H633 154 aaKnown RBP10.46□□□□□ -0.73
SKA1-202ENST00000398452 GOLT1BQ9Y3E0 138 aa10.46□□□□□ -0.73
SKA1-202ENST00000398452 A0A087WWC5 75 aa10.45□□□□□ -0.74
SKA1-202ENST00000398452 A8MWL6 223 aa10.45□□□□□ -0.74
SKA1-202ENST00000398452 CA1P00915 261 aaPredicted RBP10.45□□□□□ -0.74
SKA1-202ENST00000398452 KRTAP10-11P60412 298 aa10.45□□□□□ -0.74
SKA1-202ENST00000398452 GFI1BQ5VTD9 330 aa10.45□□□□□ -0.74
SKA1-202ENST00000398452 Q6AWC8 147 aa10.45□□□□□ -0.74
SKA1-202ENST00000398452 KCNIP4Q6PIL6 250 aa10.45□□□□□ -0.74
SKA1-202ENST00000398452 Q8N1Y9 231 aa10.45□□□□□ -0.74
SKA1-202ENST00000398452 XCL2Q9UBD3 114 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms