RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 C17orf58Q2M2W7 97 aa13.52□□□□□ -0.25
SREBF1-203ENST00000395751 C16orf54Q6UWD8 224 aa13.51□□□□□ -0.25
SREBF1-203ENST00000395751 TRAV13-1A0A0B4J241 112 aa13.51□□□□□ -0.25
SREBF1-203ENST00000395751 SPAARA0A1B0GVQ0 90 aa13.51□□□□□ -0.25
SREBF1-203ENST00000395751 ZNF295-AS1Q8N0V1 137 aa13.51□□□□□ -0.25
SREBF1-203ENST00000395751 LINC01587Q99440 93 aa13.51□□□□□ -0.25
SREBF1-203ENST00000395751 A4D1N5 150 aa13.5□□□□□ -0.25
SREBF1-203ENST00000395751 GATA1P15976 413 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-203ENST00000395751 TRPT1Q86TN4 253 aaKnown RBP13.5□□□□□ -0.25
SREBF1-203ENST00000395751 SPATA25Q9BR10 227 aa13.5□□□□□ -0.25
SREBF1-203ENST00000395751 C5orf47Q569G3 176 aa13.5□□□□□ -0.25
SREBF1-203ENST00000395751 GDF5OSQ5U4N7 250 aa13.5□□□□□ -0.25
SREBF1-203ENST00000395751 TM2D2Q9BX73 214 aa13.5□□□□□ -0.25
SREBF1-203ENST00000395751 UBL5Q9BZL1 73 aa13.5□□□□□ -0.25
SREBF1-203ENST00000395751 LAMTOR3Q9UHA4 124 aa13.5□□□□□ -0.25
SREBF1-203ENST00000395751 EML6Q6ZMW3 1958 aa13.5□□□□□ -0.25
SREBF1-203ENST00000395751 KMT2EQ8IZD2 1858 aa13.5□□□□□ -0.25
SREBF1-203ENST00000395751 PATE2Q6UY27 113 aa13.5□□□□□ -0.25
SREBF1-203ENST00000395751 CITED2Q99967 270 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-203ENST00000395751 BUB1B-PAK6H3BSN5 160 aa13.49□□□□□ -0.25
SREBF1-203ENST00000395751 IGLV2-8P01709 118 aa13.49□□□□□ -0.25
SREBF1-203ENST00000395751 NCOA6Q14686 2063 aaPredicted RBP13.49□□□□□ -0.25
SREBF1-203ENST00000395751 ADARB2-AS1A8MUL3 147 aa13.49□□□□□ -0.25
SREBF1-203ENST00000395751 VWC2LB2RUY7 222 aa13.49□□□□□ -0.25
SREBF1-203ENST00000395751 TMEM178BH3BS89 294 aa13.49□□□□□ -0.25
SREBF1-203ENST00000395751 FGF23Q9GZV9 251 aaPredicted RBP13.49□□□□□ -0.25
SREBF1-203ENST00000395751 KLHL30-AS1Q8NEE0 82 aa13.48□□□□□ -0.25
SREBF1-203ENST00000395751 GP9P14770 177 aa13.48□□□□□ -0.25
SREBF1-203ENST00000395751 PLA2G5P39877 138 aa13.48□□□□□ -0.25
SREBF1-203ENST00000395751 RBMY1FQ15415 496 aaKnown RBP13.48□□□□□ -0.25
SREBF1-203ENST00000395751 RNASE6Q93091 150 aaKnown RBP13.48□□□□□ -0.25
SREBF1-203ENST00000395751 ZNF503-AS2A6NEH8 195 aa13.48□□□□□ -0.25
SREBF1-203ENST00000395751 C17orf77Q96MU5 243 aa13.48□□□□□ -0.25
SREBF1-203ENST00000395751 IGLV2-14P01704 120 aa13.48□□□□□ -0.25
SREBF1-203ENST00000395751 EPOPA6NHQ4 379 aa13.47□□□□□ -0.25
SREBF1-203ENST00000395751 NDPQ00604 133 aa13.47□□□□□ -0.25
SREBF1-203ENST00000395751 TRBV10-2A0A0K0K1G8 114 aa13.46□□□□□ -0.25
SREBF1-203ENST00000395751 C19orf71A6NCJ1 209 aa13.46□□□□□ -0.25
SREBF1-203ENST00000395751 RS1O15537 224 aa13.46□□□□□ -0.25
SREBF1-203ENST00000395751 TRAV12-1A0A0B4J245 112 aa13.46□□□□□ -0.25
SREBF1-203ENST00000395751 IGHV1-69DA0A0B4J2H0 117 aa13.46□□□□□ -0.26
SREBF1-203ENST00000395751 CCL21O00585 134 aa13.46□□□□□ -0.26
SREBF1-203ENST00000395751 RBM3P98179 157 aaKnown RBP13.46□□□□□ -0.26
SREBF1-203ENST00000395751 MBD6Q96DN6 1003 aa13.46□□□□□ -0.26
SREBF1-203ENST00000395751 H3BT86 120 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 ZNF491Q8N8L2 437 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 PROK2Q9HC23 129 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 IGKV1OR2-108A0A075B7D4 117 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 A0A1B0GX51 115 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 Q0VFX4 171 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 PEMTQ9UBM1 199 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 BAALC-AS2P0C853 105 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 LINC00310P59036 64 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 MRAPQ8TCY5 172 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 MSRB1Q9NZV6 116 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 IGHV3-73A0A0B4J1V6 119 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 A0A0B4J2C4 111 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 C2orf91Q6ZV80 131 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 C1orf159Q96HA4 380 aa13.45□□□□□ -0.26
SREBF1-203ENST00000395751 TRBV7-1A0A0A6YYK4 115 aa13.44□□□□□ -0.26
SREBF1-203ENST00000395751 TMEM258P61165 79 aa13.44□□□□□ -0.26
SREBF1-203ENST00000395751 PRSS22Q9GZN4 317 aa13.44□□□□□ -0.26
SREBF1-203ENST00000395751 TPSG1Q9NRR2 321 aa13.44□□□□□ -0.26
SREBF1-203ENST00000395751 I3L3M4 83 aa13.44□□□□□ -0.26
SREBF1-203ENST00000395751 LOXL1Q08397 574 aaPredicted RBP13.44□□□□□ -0.26
SREBF1-203ENST00000395751 PIFOQ8TCI5 191 aa13.44□□□□□ -0.26
SREBF1-203ENST00000395751 JPT2Q9H910 190 aa13.44□□□□□ -0.26
SREBF1-203ENST00000395751 OOSP1A8MZH6 123 aa13.43□□□□□ -0.26
SREBF1-203ENST00000395751 ATP5G1P05496 136 aa13.43□□□□□ -0.26
SREBF1-203ENST00000395751 WDR90Q96KV7 1748 aa13.43□□□□□ -0.26
SREBF1-203ENST00000395751 LYNX1G3V0Z9 82 aa13.43□□□□□ -0.26
SREBF1-203ENST00000395751 P0C879 139 aa13.43□□□□□ -0.26
SREBF1-203ENST00000395751 LYNX1P0DP58 116 aa13.43□□□□□ -0.26
SREBF1-203ENST00000395751 Q8N976 141 aa13.43□□□□□ -0.26
SREBF1-203ENST00000395751 IGHV3OR16-10A0A075B7F0 116 aa13.43□□□□□ -0.26
SREBF1-203ENST00000395751 ZNF503Q96F45 646 aa13.43□□□□□ -0.26
SREBF1-203ENST00000395751 TCL1BO95988 128 aa13.42□□□□□ -0.26
SREBF1-203ENST00000395751 MUSTN1Q8IVN3 82 aa13.42□□□□□ -0.26
SREBF1-203ENST00000395751 PHLDA1Q8WV24 401 aaPredicted RBP13.42□□□□□ -0.26
SREBF1-203ENST00000395751 LINC00311Q8N616 119 aa13.42□□□□□ -0.26
SREBF1-203ENST00000395751 OBSL1O75147 1896 aa13.42□□□□□ -0.26
SREBF1-203ENST00000395751 ZNF415Q09FC8 603 aa13.42□□□□□ -0.26
SREBF1-203ENST00000395751 KRTAP27-1Q3LI81 207 aa13.42□□□□□ -0.26
SREBF1-203ENST00000395751 UFSP1Q6NVU6 142 aa13.42□□□□□ -0.26
SREBF1-203ENST00000395751 NDUFA11Q86Y39 141 aa13.42□□□□□ -0.26
SREBF1-203ENST00000395751 ITLN2Q8WWU7 325 aaPredicted RBP13.42□□□□□ -0.26
SREBF1-203ENST00000395751 COLQQ9Y215 455 aaPredicted RBP13.42□□□□□ -0.26
SREBF1-203ENST00000395751 RPL32P62910 135 aaKnown RBP13.41□□□□□ -0.26
SREBF1-203ENST00000395751 Q8N1Y9 231 aa13.41□□□□□ -0.26
SREBF1-203ENST00000395751 PLXNB3Q9ULL4 1909 aa13.41□□□□□ -0.26
SREBF1-203ENST00000395751 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.41□□□□□ -0.263e-7■■■□□ 18.6
SREBF1-203ENST00000395751 ICOSQ9Y6W8 199 aa13.41□□□□□ -0.26
SREBF1-203ENST00000395751 TRGV2A0A075B6R0 118 aa13.41□□□□□ -0.26
SREBF1-203ENST00000395751 COL4A3Q01955 1670 aa13.41□□□□□ -0.26
SREBF1-203ENST00000395751 TRAV41A0A0B4J266 112 aa13.4□□□□□ -0.26
SREBF1-203ENST00000395751 FREM1Q5H8C1 2179 aa13.4□□□□□ -0.26
SREBF1-203ENST00000395751 MED13LQ71F56 2210 aa13.4□□□□□ -0.26
SREBF1-203ENST00000395751 GATA4P43694 442 aa13.4□□□□□ -0.26
SREBF1-203ENST00000395751 RPL36AP83881 106 aaKnown RBP13.4□□□□□ -0.26
SREBF1-203ENST00000395751 RPL36ALQ969Q0 106 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms