RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 RBMY1CP0DJD4 496 aa12.97□□□□□ -0.33
SCN3B-202ENST00000392770 CACNA1HO95180 2353 aa12.97□□□□□ -0.33
SCN3B-202ENST00000392770 ZFHX2Q9C0A1 2572 aaPredicted RBP12.97□□□□□ -0.33
SCN3B-202ENST00000392770 A0A0U1RRA0 63 aa12.96□□□□□ -0.33
SCN3B-202ENST00000392770 FOXE3Q13461 319 aa12.96□□□□□ -0.33
SCN3B-202ENST00000392770 SFTA2Q6UW10 78 aa12.96□□□□□ -0.33
SCN3B-202ENST00000392770 CTSGP08311 255 aa12.96□□□□□ -0.33
SCN3B-202ENST00000392770 AZU1P20160 251 aa12.96□□□□□ -0.33
SCN3B-202ENST00000392770 PRSS57Q6UWY2 283 aa12.96□□□□□ -0.33
SCN3B-202ENST00000392770 C11orf1Q9H5F2 150 aa12.96□□□□□ -0.33
SCN3B-202ENST00000392770 TSSC4Q9Y5U2 329 aaPredicted RBP12.96□□□□□ -0.34
SCN3B-202ENST00000392770 A0A087WX48 190 aa12.95□□□□□ -0.34
SCN3B-202ENST00000392770 RBAKDNA6NC62 111 aa12.95□□□□□ -0.34
SCN3B-202ENST00000392770 IGKV1-17P01599 117 aa12.95□□□□□ -0.34
SCN3B-202ENST00000392770 UTF1Q5T230 341 aa12.95□□□□□ -0.34
SCN3B-202ENST00000392770 NPC2P61916 151 aa12.95□□□□□ -0.34
SCN3B-202ENST00000392770 MRPL53Q96EL3 112 aaKnown RBP12.95□□□□□ -0.34
SCN3B-202ENST00000392770 TP53TG1Q9Y2A0 90 aa12.95□□□□□ -0.34
SCN3B-202ENST00000392770 EML6Q6ZMW3 1958 aa12.95□□□□□ -0.34
SCN3B-202ENST00000392770 MED13Q9UHV7 2174 aa12.95□□□□□ -0.34
SCN3B-202ENST00000392770 ZNF664Q8N3J9 261 aa12.95□□□□□ -0.34
SCN3B-202ENST00000392770 C1orf159Q96HA4 380 aa12.95□□□□□ -0.34
SCN3B-202ENST00000392770 CFHR4Q92496 578 aa12.95□□□□□ -0.34
SCN3B-202ENST00000392770 PLEKHB2Q96CS7 222 aa12.95□□□□□ -0.34
SCN3B-202ENST00000392770 AGPAT4-IT1Q9H0P7 198 aa12.94□□□□□ -0.34
SCN3B-202ENST00000392770 A0A1B0GWB2 263 aa12.94□□□□□ -0.34
SCN3B-202ENST00000392770 INS-IGF2F8WCM5 200 aa12.94□□□□□ -0.34
SCN3B-202ENST00000392770 SLURP1P55000 103 aa12.94□□□□□ -0.34
SCN3B-202ENST00000392770 IGHV1-24A0A0C4DH33 117 aa12.94□□□□□ -0.34
SCN3B-202ENST00000392770 FOXI2Q6ZQN5 318 aa12.93□□□□□ -0.34
SCN3B-202ENST00000392770 AJUBAQ96IF1 538 aa12.93□□□□□ -0.34
SCN3B-202ENST00000392770 A0A087X0K7 114 aa12.93□□□□□ -0.34
SCN3B-202ENST00000392770 WI2-2373I1.2A0A1W2PRP0 233 aa12.93□□□□□ -0.34
SCN3B-202ENST00000392770 I3L3M4 83 aa12.93□□□□□ -0.34
SCN3B-202ENST00000392770 RHODO00212 210 aa12.93□□□□□ -0.34
SCN3B-202ENST00000392770 CRYGCP07315 174 aa12.93□□□□□ -0.34
SCN3B-202ENST00000392770 EGR2P11161 476 aaPredicted RBP12.93□□□□□ -0.34
SCN3B-202ENST00000392770 POLR3KQ9Y2Y1 108 aaPredicted RBP12.93□□□□□ -0.34
SCN3B-202ENST00000392770 SEC11AP67812 179 aa12.93□□□□□ -0.34
SCN3B-202ENST00000392770 ATP6V0BQ99437 205 aa12.93□□□□□ -0.34
SCN3B-202ENST00000392770 A8MWV9 139 aa12.93□□□□□ -0.34
SCN3B-202ENST00000392770 GAGE12JA6NER3 117 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 LINC00158P58513 81 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 GAGE1Q13065 139 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 GAGE4Q13068 117 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 GAGE5Q13069 117 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 GAGE13Q4V321 117 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 DOCK10Q96BY6 2186 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 TMEM238C9JI98 176 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 CCL24O00175 119 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 ZC2HC1BQ5TFG8 222 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 LINC00574Q9H8X3 128 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 MORN3Q6PF18 240 aaPredicted RBP12.92□□□□□ -0.34
SCN3B-202ENST00000392770 RASL10AQ92737 203 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 TRAV13-1A0A0B4J241 112 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 NPYP01303 97 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 P0C879 139 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 SIGLEC8Q9NYZ4 499 aa12.92□□□□□ -0.34
SCN3B-202ENST00000392770 IGF2BP2-AS1Q96M15 143 aa12.91□□□□□ -0.34
SCN3B-202ENST00000392770 MRPL36Q9P0J6 103 aaKnown RBP12.91□□□□□ -0.34
SCN3B-202ENST00000392770 IGKV1OR2-108A0A075B7D4 117 aa12.91□□□□□ -0.34
SCN3B-202ENST00000392770 CGB3P0DN86 165 aa12.91□□□□□ -0.34
SCN3B-202ENST00000392770 CGB7P0DN87 165 aa12.91□□□□□ -0.34
SCN3B-202ENST00000392770 PLA2G5P39877 138 aa12.91□□□□□ -0.34
SCN3B-202ENST00000392770 C2orf66Q6UXQ4 117 aa12.91□□□□□ -0.34
SCN3B-202ENST00000392770 C1orf229Q6ZS94 237 aaPredicted RBP12.91□□□□□ -0.34
SCN3B-202ENST00000392770 BCL6BQ8N143 479 aaPredicted RBP12.91□□□□□ -0.34
SCN3B-202ENST00000392770 GNRH2O43555 120 aa12.91□□□□□ -0.34
SCN3B-202ENST00000392770 CKS1BP61024 79 aa12.91□□□□□ -0.34
SCN3B-202ENST00000392770 NEGR1Q7Z3B1 354 aa12.91□□□□□ -0.34
SCN3B-202ENST00000392770 STPG4Q8N801 248 aa12.91□□□□□ -0.34
SCN3B-202ENST00000392770 FAM167A-AS1Q96KT0 104 aa12.91□□□□□ -0.34
SCN3B-202ENST00000392770 BRWD1-AS2P59051 145 aa12.91□□□□□ -0.34
SCN3B-202ENST00000392770 Q6ZWC4 215 aa12.91□□□□□ -0.34
SCN3B-202ENST00000392770 GAGE12BA1L429 117 aa12.9□□□□□ -0.34
SCN3B-202ENST00000392770 GAGE7O76087 117 aa12.9□□□□□ -0.34
SCN3B-202ENST00000392770 GAGE12FP0CL80 117 aa12.9□□□□□ -0.34
SCN3B-202ENST00000392770 GAGE12GP0CL81 117 aa12.9□□□□□ -0.34
SCN3B-202ENST00000392770 GAGE12IP0CL82 117 aa12.9□□□□□ -0.34
SCN3B-202ENST00000392770 DYSFO75923 2080 aa12.9□□□□□ -0.34
SCN3B-202ENST00000392770 SPXQ9BT56 116 aa12.9□□□□□ -0.34
SCN3B-202ENST00000392770 ODF3BA8MYP8 253 aa12.9□□□□□ -0.34
SCN3B-202ENST00000392770 TMEM141Q96I45 108 aa12.9□□□□□ -0.34
SCN3B-202ENST00000392770 CADP27708 2225 aa12.9□□□□□ -0.35
SCN3B-202ENST00000392770 SDHAF1A6NFY7 115 aa12.89□□□□□ -0.35
SCN3B-202ENST00000392770 C16orf54Q6UWD8 224 aa12.89□□□□□ -0.35
SCN3B-202ENST00000392770 TNRC6AQ8NDV7 1962 aaKnown RBP12.89□□□□□ -0.35
SCN3B-202ENST00000392770 UBE2DNLQ8IWF7 75 aa12.89□□□□□ -0.35
SCN3B-202ENST00000392770 ZNF318Q5VUA4 2279 aa12.89□□□□□ -0.35
SCN3B-202ENST00000392770 TIMM21Q9BVV7 248 aa12.89□□□□□ -0.35
SCN3B-202ENST00000392770 PAX2Q02962 417 aa12.89□□□□□ -0.35
SCN3B-202ENST00000392770 SAMD5Q5TGI4 173 aa12.89□□□□□ -0.35
SCN3B-202ENST00000392770 LY6G5BQ8NDX9 201 aa12.88□□□□□ -0.35
SCN3B-202ENST00000392770 DOCK11Q5JSL3 2073 aa12.88□□□□□ -0.35
SCN3B-202ENST00000392770 IGHV3-38A0A0C4DH36 116 aa12.88□□□□□ -0.35
SCN3B-202ENST00000392770 BUB3O43684 328 aa12.88□□□□□ -0.35
SCN3B-202ENST00000392770 DAD1P61803 113 aa12.88□□□□□ -0.35
SCN3B-202ENST00000392770 WIPF2Q8TF74 440 aaPredicted RBP12.88□□□□□ -0.35
SCN3B-202ENST00000392770 ZNF479Q96JC4 524 aa12.88□□□□□ -0.35
SCN3B-202ENST00000392770 PROP1O75360 226 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms