RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 C3orf85A0A1B0GTC6 90 aa-3.34□□□□□ -2.94
SNORA40-201ENST00000388090 RER1O15258 196 aa-3.34□□□□□ -2.94
SNORA40-201ENST00000388090 LYPLA2O95372 231 aa-3.34□□□□□ -2.94
SNORA40-201ENST00000388090 APOA1P02647 267 aa-3.34□□□□□ -2.94
SNORA40-201ENST00000388090 MT1AP04731 61 aa-3.34□□□□□ -2.94
SNORA40-201ENST00000388090 TCL1AP56279 114 aa-3.34□□□□□ -2.94
SNORA40-201ENST00000388090 IQCJQ1A5X6 159 aa-3.34□□□□□ -2.94
SNORA40-201ENST00000388090 ACOT6Q3I5F7 207 aaPredicted RBP-3.34□□□□□ -2.94
SNORA40-201ENST00000388090 DCUN1D5Q9BTE7 237 aa-3.34□□□□□ -2.94
SNORA40-201ENST00000388090 SIPA1L3O60292 1781 aaPredicted RBP-3.34□□□□□ -2.94
SNORA40-201ENST00000388090 KIF1BO60333 1816 aa-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 USP54Q70EL1 1684 aa-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 FXYD6-FXYD2A0A087WZ82 144 aa-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 IFITM5A6NNB3 132 aa-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 C8GP07360 202 aa-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 ACYP2P14621 99 aa-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 PMS2P3Q13401 168 aa-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 CLEC6AQ6EIG7 209 aa-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 OR6V1Q8N148 313 aa-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 CIB3Q96Q77 187 aaPredicted RBP-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 BATF3Q9NR55 127 aa-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 PLEKHJ1Q9NW61 149 aa-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 PLXNB2O15031 1838 aa-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 ANK3Q12955 4377 aaKnown RBP-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 N4BP2Q86UW6 1770 aaPredicted RBP-3.35□□□□□ -2.95
SNORA40-201ENST00000388090 TRBV10-3A0A0K0K1G6 114 aa-3.36□□□□□ -2.95
SNORA40-201ENST00000388090 ZNF670-ZNF695F2Z2N8 137 aa-3.36□□□□□ -2.95
SNORA40-201ENST00000388090 TTRP02766 147 aa-3.36□□□□□ -2.95
SNORA40-201ENST00000388090 CRHP06850 196 aa-3.36□□□□□ -2.95
SNORA40-201ENST00000388090 IL7P13232 177 aa-3.36□□□□□ -2.95
SNORA40-201ENST00000388090 BLVRAP53004 296 aa-3.36□□□□□ -2.95
SNORA40-201ENST00000388090 CARD18P57730 90 aa-3.36□□□□□ -2.95
SNORA40-201ENST00000388090 SPCS3P61009 180 aa-3.36□□□□□ -2.95
SNORA40-201ENST00000388090 OR2F1Q13607 317 aa-3.36□□□□□ -2.95
SNORA40-201ENST00000388090 VPS13BQ7Z7G8 4022 aa-3.36□□□□□ -2.95
SNORA40-201ENST00000388090 K7ERJ3 54 aa-3.37□□□□□ -2.95
SNORA40-201ENST00000388090 CST7O76096 145 aa-3.37□□□□□ -2.95
SNORA40-201ENST00000388090 CAPZBP47756 277 aa-3.37□□□□□ -2.95
SNORA40-201ENST00000388090 DEFB135Q30KP9 77 aa-3.37□□□□□ -2.95
SNORA40-201ENST00000388090 UNQ5815/PRO19632Q6UWF5 114 aa-3.37□□□□□ -2.95
SNORA40-201ENST00000388090 FAM216BQ8N7L0 139 aa-3.37□□□□□ -2.95
SNORA40-201ENST00000388090 OR5A2Q8NGI9 324 aa-3.37□□□□□ -2.95
SNORA40-201ENST00000388090 FGD6Q6ZV73 1430 aa-3.37□□□□□ -2.95
SNORA40-201ENST00000388090 NUP210LQ5VU65 1888 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 RBAKDNA6NC62 111 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 ARL5CA6NH57 179 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 GOLGA8KD6RF30 607 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 IFNA4P05014 189 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 IVLP07476 585 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 CCDC172P0C7W6 258 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 SDC4P31431 198 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 ARPP19P56211 112 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 DCDP81605 110 aaKnown RBP-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 RHOHQ15669 191 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 OR4B1Q8NGF8 309 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 GLTPQ9NZD2 209 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 SLC22A13Q9Y226 551 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 TPRKBQ9Y3C4 175 aa-3.38□□□□□ -2.95
SNORA40-201ENST00000388090 TRAV4A0A0B4J268 109 aa-3.39□□□□□ -2.95
SNORA40-201ENST00000388090 hADV38S2A0JD32 116 aa-3.39□□□□□ -2.95
SNORA40-201ENST00000388090 LRRN3E7EW58 273 aa-3.39□□□□□ -2.95
SNORA40-201ENST00000388090 SPINK4O60575 86 aa-3.39□□□□□ -2.95
SNORA40-201ENST00000388090 FAM151BQ6UXP7 276 aa-3.39□□□□□ -2.95
SNORA40-201ENST00000388090 MAP1LC3BQ9GZQ8 125 aa-3.39□□□□□ -2.95
SNORA40-201ENST00000388090 C19orf12Q9NSK7 152 aa-3.39□□□□□ -2.95
SNORA40-201ENST00000388090 UBR2Q8IWV8 1755 aa-3.39□□□□□ -2.95
SNORA40-201ENST00000388090 CASZ1Q86V15 1759 aa-3.4□□□□□ -2.95
SNORA40-201ENST00000388090 TRGV1A0A0A0MS02 117 aa-3.4□□□□□ -2.95
SNORA40-201ENST00000388090 TRBV7-1A0A0A6YYK4 115 aa-3.4□□□□□ -2.95
SNORA40-201ENST00000388090 CST8O60676 142 aa-3.4□□□□□ -2.95
SNORA40-201ENST00000388090 BCE1O60756 84 aa-3.4□□□□□ -2.95
SNORA40-201ENST00000388090 CNIH1O95406 144 aa-3.4□□□□□ -2.95
SNORA40-201ENST00000388090 CXCL1P09341 107 aa-3.4□□□□□ -2.95
SNORA40-201ENST00000388090 BCL2P10415 239 aa-3.4□□□□□ -2.95
SNORA40-201ENST00000388090 AKIRIN2Q53H80 203 aa-3.4□□□□□ -2.95
SNORA40-201ENST00000388090 DRC3Q9H069 523 aa-3.4□□□□□ -2.95
SNORA40-201ENST00000388090 UQCC1Q9NVA1 299 aa-3.4□□□□□ -2.95
SNORA40-201ENST00000388090 TGIF2-C20orf24A0A0A6YYL0 155 aa-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 FABP12A6NFH5 140 aa-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 APOC4-APOC2K7ER74 178 aa-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 SERPINA1P01009 418 aa-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 COX5BP10606 129 aa-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 TMBIM6P55061 237 aa-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 DNAJB13P59910 316 aa-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 MYL6P60660 151 aa-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 HIST3H3Q16695 136 aa-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 IAH1Q2TAA2 248 aaPredicted RBP-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 DEFB112Q30KQ8 113 aa-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 OR8J3Q8NGG0 315 aa-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 DCUN1D1Q96GG9 259 aa-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 RNASE7Q9H1E1 156 aaKnown RBP-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 TP53AIP1Q9HCN2 124 aa-3.41□□□□□ -2.96
SNORA40-201ENST00000388090 I3L2K1 104 aa-3.42□□□□□ -2.96
SNORA40-201ENST00000388090 PIN1P1O15428 100 aa-3.42□□□□□ -2.96
SNORA40-201ENST00000388090 CHP2O43745 196 aa-3.42□□□□□ -2.96
SNORA40-201ENST00000388090 CALUO43852 315 aaPredicted RBP-3.42□□□□□ -2.96
SNORA40-201ENST00000388090 APOEP02649 317 aa-3.42□□□□□ -2.96
SNORA40-201ENST00000388090 UBE2G2P60604 165 aa-3.42□□□□□ -2.96
SNORA40-201ENST00000388090 ITGB3BPQ13352 177 aaPredicted RBP-3.42□□□□□ -2.96
SNORA40-201ENST00000388090 POU6F1Q14863 301 aa-3.42□□□□□ -2.96
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms