RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 C8orf31Q8N9H6 132 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 SPINK8P0C7L1 97 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 DAD1P61803 113 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 C3orf56Q8N813 242 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 VOPP1Q96AW1 172 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 F8VRH5 84 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 ZNRF2Q8NHG8 242 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 PYGO2Q9BRQ0 406 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 MRPL35Q9NZE8 188 aaKnown RBP12.72□□□□□ -0.37
COL2A1-202ENST00000380518 TRAV12-2A0A075B6T6 113 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 C9orf118A6NHY6 69 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 F5H768 121 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 INAFM2P0DMQ5 153 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 TMEM243Q9BU79 118 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 CDK2AP2O75956 126 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 HLA-DRB4P13762 266 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 CFHR3Q02985 330 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 HLA-DRB4X5D2U9 266 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 FAM208BQ5VWN6 2430 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 IGHV7-4-1A0A0J9YVY3 117 aa12.71□□□□□ -0.37
COL2A1-202ENST00000380518 OR11H6Q8NGC7 330 aa12.71□□□□□ -0.37
COL2A1-202ENST00000380518 ELANEP08246 267 aa12.71□□□□□ -0.37
COL2A1-202ENST00000380518 Q96MF0 132 aa12.71□□□□□ -0.38
COL2A1-202ENST00000380518 NDUFA12Q9UI09 145 aa12.71□□□□□ -0.38
COL2A1-202ENST00000380518 ZNF561-AS1K7EIQ3 104 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 IGHV2-70P01814 119 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 SRSF2Q01130 221 aaKnown RBP12.7□□□□□ -0.38
COL2A1-202ENST00000380518 LURAP1LQ8IV03 231 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 C20orf78Q9BR46 151 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 GAGE7O76087 117 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 GAGE12FP0CL80 117 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 GAGE12GP0CL81 117 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 GAGE12IP0CL82 117 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 BDP1A6H8Y1 2624 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 IGLC7A0M8Q6 106 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 LTAP01374 205 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 PFN2P35080 140 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 C22orf46C9J442 243 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 H3BMM0 161 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 H3BUA1 57 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 LYPD6BQ8NI32 183 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 UBE2WQ96B02 151 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 C11orf53Q8IXP5 236 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 TTC28Q96AY4 2481 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 SOCS3O14543 225 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 VWC2Q2TAL6 325 aa12.68□□□□□ -0.38
COL2A1-202ENST00000380518 ATP6V0BQ99437 205 aa12.68□□□□□ -0.38
COL2A1-202ENST00000380518 TCF15Q12870 199 aa12.68□□□□□ -0.38
COL2A1-202ENST00000380518 IGHV3-38A0A0C4DH36 116 aa12.68□□□□□ -0.38
COL2A1-202ENST00000380518 PIP4P1Q86T03 277 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 TAL2Q16559 108 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 EDA2RQ9HAV5 297 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 CTSZQ9UBR2 303 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 TICRRQ7Z2Z1 1910 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 PTPRQQ9UMZ3 2332 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 PPDPFLQ8WWR9 84 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 TSC2P49815 1807 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 K7EN84 100 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 ETDBQ3ZM63 59 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 PRO1854Q9UHT4 67 aa12.66□□□□□ -0.38
COL2A1-202ENST00000380518 GAGE6Q13070 117 aa12.66□□□□□ -0.38
COL2A1-202ENST00000380518 FAM120AOSQ5T036 256 aa12.66□□□□□ -0.38
COL2A1-202ENST00000380518 FGF6P10767 208 aa12.66□□□□□ -0.38
COL2A1-202ENST00000380518 LENEPQ9Y5L5 61 aa12.66□□□□□ -0.38
COL2A1-202ENST00000380518 BVES-AS1Q5T3Y7 98 aa12.66□□□□□ -0.38
COL2A1-202ENST00000380518 WIPF2Q8TF74 440 aaPredicted RBP12.65□□□□□ -0.38
COL2A1-202ENST00000380518 RNF138Q8WVD3 245 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 F8W1H4 67 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 J3QQQ9 107 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 C17orf77Q96MU5 243 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 HELZP42694 1942 aaKnown RBP12.65□□□□□ -0.38
COL2A1-202ENST00000380518 SHISA9B4DS77 424 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 NDUFS7O75251 213 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 MRPL53Q96EL3 112 aaKnown RBP12.65□□□□□ -0.38
COL2A1-202ENST00000380518 MYLKQ15746 1914 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 APOC4P55056 127 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 ZNF493Q6ZR52 646 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 DYNAPQ8N1N2 210 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 K7EP34 96 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 ASPHD1Q5U4P2 390 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 SPANXA1Q9NS26 97 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 ZFHX2Q9C0A1 2572 aaPredicted RBP12.64□□□□□ -0.39
COL2A1-202ENST00000380518 HERVK_113P63121 156 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 MORN5Q5VZ52 161 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 NLRC5Q86WI3 1866 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 ZGRF1Q86YA3 2104 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 SIVA1O15304 175 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 FOXI2Q6ZQN5 318 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 SLX1AQ9BQ83 275 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 PLXNA2O75051 1894 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 MED13Q9UHV7 2174 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 ACACBO00763 2458 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 RBAKDNA6NC62 111 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 NXPH4O95158 308 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 HLA-DMBP28068 263 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 PCNX2A6NKB5 2137 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 K7EP13 123 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 EGR2P11161 476 aaPredicted RBP12.63□□□□□ -0.39
COL2A1-202ENST00000380518 CEND1Q8N111 149 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms