RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 NIPSNAP3BQ9BS92 247 aa8.46□□□□□ -1.06
DEPDC4-202ENST00000378244 NKX6-2Q9C056 277 aaPredicted RBP8.46□□□□□ -1.06
DEPDC4-202ENST00000378244 TREM1Q9NP99 234 aa8.46□□□□□ -1.06
DEPDC4-202ENST00000378244 C7orf71A4D174 169 aa8.45□□□□□ -1.06
DEPDC4-202ENST00000378244 KLLNB2CW77 178 aa8.45□□□□□ -1.06
DEPDC4-202ENST00000378244 FLI1Q01543 452 aaPredicted RBP8.45□□□□□ -1.06
DEPDC4-202ENST00000378244 TEX261Q6UWH6 196 aa8.45□□□□□ -1.06
DEPDC4-202ENST00000378244 CCDC28AQ8IWP9 274 aa8.45□□□□□ -1.06
DEPDC4-202ENST00000378244 PSG8Q9UQ74 426 aa8.45□□□□□ -1.06
DEPDC4-202ENST00000378244 LOC102723971A0A1B0GUV8 181 aa8.45□□□□□ -1.06
DEPDC4-202ENST00000378244 IGLV2-11P01706 119 aa8.45□□□□□ -1.06
DEPDC4-202ENST00000378244 S100A9P06702 114 aaKnown RBP8.45□□□□□ -1.06
DEPDC4-202ENST00000378244 CRISP2P16562 243 aa8.45□□□□□ -1.06
DEPDC4-202ENST00000378244 ZNF767PQ75MW2 155 aa8.45□□□□□ -1.06
DEPDC4-202ENST00000378244 C8orf49Q96NF6 230 aa8.45□□□□□ -1.06
DEPDC4-202ENST00000378244 SPXQ9BT56 116 aa8.45□□□□□ -1.06
DEPDC4-202ENST00000378244 SCO2A0A1W2PP80 73 aa8.44□□□□□ -1.06
DEPDC4-202ENST00000378244 H7BYZ3 331 aa8.44□□□□□ -1.06
DEPDC4-202ENST00000378244 MUC21Q5SSG8 566 aa8.44□□□□□ -1.06
DEPDC4-202ENST00000378244 ZNF680Q8NEM1 530 aa8.44□□□□□ -1.06
DEPDC4-202ENST00000378244 HIST1H2BAQ96A08 127 aa8.44□□□□□ -1.06
DEPDC4-202ENST00000378244 BLOC1S1P78537 153 aa8.43□□□□□ -1.06
DEPDC4-202ENST00000378244 NDFIP1Q9BT67 221 aa8.43□□□□□ -1.06
DEPDC4-202ENST00000378244 MANBALQ9NQG1 85 aa8.43□□□□□ -1.06
DEPDC4-202ENST00000378244 SERTM2A0A1B0GWG4 89 aa8.43□□□□□ -1.06
DEPDC4-202ENST00000378244 ZNF324O75467 553 aaPredicted RBP8.43□□□□□ -1.06
DEPDC4-202ENST00000378244 PPT1P50897 306 aa8.43□□□□□ -1.06
DEPDC4-202ENST00000378244 NANOS2P60321 138 aaKnown RBP8.43□□□□□ -1.06
DEPDC4-202ENST00000378244 UBE2G1P62253 170 aa8.43□□□□□ -1.06
DEPDC4-202ENST00000378244 ZFAND6Q6FIF0 208 aa8.43□□□□□ -1.06
DEPDC4-202ENST00000378244 NAGKQ9UJ70 344 aa8.43□□□□□ -1.06
DEPDC4-202ENST00000378244 CELA1Q9UNI1 258 aa8.43□□□□□ -1.06
DEPDC4-202ENST00000378244 A4D1N5 150 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 EREGO14944 169 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 TAS2R60P59551 318 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 TMEM256Q8N2U0 113 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 TMEM75Q8N9X5 138 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 NHLRC2Q8NBF2 726 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 C11orf45Q8TAV5 145 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 NEU1Q99519 415 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 ARL2-SNX15V9GYD0 113 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 TENM2Q9NT68 2774 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 SMIM9A6NGZ8 99 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 RGS13O14921 159 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 GCGP01275 180 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 NMBP08949 121 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 AKR1C3P42330 323 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 MEF2BQ02080 365 aaPredicted RBP8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 DERL1Q9BUN8 251 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 LENEPQ9Y5L5 61 aa8.42□□□□□ -1.06
DEPDC4-202ENST00000378244 CBY3A6NI87 242 aa8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 IFNA1P01562 189 aa8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 BCL2P10415 239 aa8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 ZNF80P51504 273 aaPredicted RBP8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 IL17DQ8TAD2 202 aa8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 MUC7Q8TAX7 377 aa8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 C11orf68Q9H3H3 251 aaKnown RBP8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 TP53TG3Q9ULZ0 132 aa8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 TRBV7-9A0A0J9YWB2 115 aa8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 CXorf65A6NEN9 183 aa8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 FAM222AQ5U5X8 452 aa8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 Q86TA4 180 aa8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 C20orf144Q9BQM9 153 aa8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 PYGO2Q9BRQ0 406 aa8.41□□□□□ -1.06
DEPDC4-202ENST00000378244 SAPCD1Q5SSQ6 148 aa8.4□□□□□ -1.06
DEPDC4-202ENST00000378244 C2CD4CQ8TF44 421 aa8.4□□□□□ -1.06
DEPDC4-202ENST00000378244 CSMD3Q7Z407 3707 aa8.4□□□□□ -1.07
DEPDC4-202ENST00000378244 FMC1Q96HJ9 113 aa8.4□□□□□ -1.07
DEPDC4-202ENST00000378244 EIF5A2Q9GZV4 153 aaKnown RBP8.4□□□□□ -1.07
DEPDC4-202ENST00000378244 NOP10Q9NPE3 64 aaKnown RBP8.4□□□□□ -1.07
DEPDC4-202ENST00000378244 VAX2Q9UIW0 290 aa8.4□□□□□ -1.07
DEPDC4-202ENST00000378244 IGHV1OR15-1A0A075B7D0 117 aa8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 DEFB130BP0DP73 79 aa8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 DEFB130AP0DP74 79 aa8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 RPL35P42766 123 aaKnown RBP8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 CEBPGP53567 150 aa8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 TMEM183BQ1AE95 376 aa8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 TOR2AQ5JU69 321 aa8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 FAM159AQ6UWV7 190 aa8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 LYPD6BQ8NI32 183 aa8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 RNASE8Q8TDE3 154 aaKnown RBP8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 TMEM263Q8WUH6 116 aaKnown RBP8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 TCEAL7Q9BRU2 100 aa8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 GSN-AS1Q9NRJ2 163 aa8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 MED9Q9NWA0 146 aa8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 KLF12Q9Y4X4 402 aa8.39□□□□□ -1.07
DEPDC4-202ENST00000378244 PLAC8L1A1L4L8 177 aa8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 RBFOX3A6NFN3 312 aa8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 TNFRSF6BO95407 300 aa8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 Q6AWC8 147 aa8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 Q6ZTC4 211 aa8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 ZC2HC1AQ96GY0 325 aa8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 DKK2Q9UBU2 259 aa8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 TRAV21A0A0B4J279 112 aa8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 TMEM189A5PLL7 270 aa8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 FBLL1A6NHQ2 334 aaKnown RBP8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 GNRH2O43555 120 aa8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 SPART-AS1P0CW21 52 aa8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 BAGE2Q86Y30 109 aa8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 TMEM183AQ8IXX5 376 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms