RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 TMEM11P17152 192 aa13.87□□□□□ -0.19
GNE-201ENST00000377902 RPL24P83731 157 aaKnown RBP13.87□□□□□ -0.19
GNE-201ENST00000377902 C15orf32Q32M92 178 aa13.87□□□□□ -0.19
GNE-201ENST00000377902 NXT2Q9NPJ8 142 aaKnown RBP13.87□□□□□ -0.19
GNE-201ENST00000377902 MRPL35Q9NZE8 188 aaKnown RBP13.87□□□□□ -0.19
GNE-201ENST00000377902 AGRNO00468 2067 aa13.87□□□□□ -0.19
GNE-201ENST00000377902 IGLV2-18A0A075B6J9 118 aa13.87□□□□□ -0.19
GNE-201ENST00000377902 CDSNQ15517 529 aa13.87□□□□□ -0.19
GNE-201ENST00000377902 VMO1Q7Z5L0 202 aa13.87□□□□□ -0.19
GNE-201ENST00000377902 PTPRZ1P23471 2315 aaPredicted RBP13.86□□□□□ -0.19
GNE-201ENST00000377902 TMEM238C9JI98 176 aa13.86□□□□□ -0.19
GNE-201ENST00000377902 ECSCRQ19T08 205 aa13.86□□□□□ -0.19
GNE-201ENST00000377902 AGPAT4-IT1Q9H0P7 198 aa13.86□□□□□ -0.19
GNE-201ENST00000377902 UFC1Q9Y3C8 167 aa13.86□□□□□ -0.19
GNE-201ENST00000377902 PRTN3P24158 256 aa13.86□□□□□ -0.19
GNE-201ENST00000377902 EFNA4P52798 201 aa13.86□□□□□ -0.19
GNE-201ENST00000377902 LINC01559Q495D7 138 aa13.86□□□□□ -0.19
GNE-201ENST00000377902 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.86□□□□□ -0.19
GNE-201ENST00000377902 OR5A1Q8NGJ0 315 aa13.86□□□□□ -0.19
GNE-201ENST00000377902 PHLDA1Q8WV24 401 aaPredicted RBP13.86□□□□□ -0.19
GNE-201ENST00000377902 TEX48A0A1B0GUV7 120 aa13.85□□□□□ -0.19
GNE-201ENST00000377902 BUB3O43684 328 aa13.85□□□□□ -0.19
GNE-201ENST00000377902 DPM2O94777 84 aa13.85□□□□□ -0.19
GNE-201ENST00000377902 VPS13CQ709C8 3753 aa13.85□□□□□ -0.19
GNE-201ENST00000377902 Q8N8P6 123 aa13.84□□□□□ -0.19
GNE-201ENST00000377902 LINC01548A6NM66 108 aa13.84□□□□□ -0.19
GNE-201ENST00000377902 Q8N6K4 173 aa13.84□□□□□ -0.19
GNE-201ENST00000377902 PIFOQ8TCI5 191 aa13.84□□□□□ -0.19
GNE-201ENST00000377902 ZFAND3Q9H8U3 227 aa13.84□□□□□ -0.19
GNE-201ENST00000377902 J3KRW8 73 aa13.83□□□□□ -0.19
GNE-201ENST00000377902 CEND1Q8N111 149 aa13.83□□□□□ -0.19
GNE-201ENST00000377902 HIGD1BQ9P298 99 aa13.83□□□□□ -0.19
GNE-201ENST00000377902 SPTBN1Q01082 2364 aaKnown RBP13.83□□□□□ -0.2
GNE-201ENST00000377902 CLPSL1A2RUU4 121 aa13.83□□□□□ -0.2
GNE-201ENST00000377902 GOSR1O95249 250 aa13.83□□□□□ -0.2
GNE-201ENST00000377902 CLEC19AQ6UXS0 136 aa13.83□□□□□ -0.2
GNE-201ENST00000377902 NRACQ8N912 160 aa13.83□□□□□ -0.2
GNE-201ENST00000377902 MSRB2Q9Y3D2 182 aa13.83□□□□□ -0.2
GNE-201ENST00000377902 IGHV7-4-1A0A0J9YVY3 117 aa13.82□□□□□ -0.2
GNE-201ENST00000377902 G3V318 75 aa13.82□□□□□ -0.2
GNE-201ENST00000377902 ZFP36P26651 326 aaKnown RBP13.82□□□□□ -0.2
GNE-201ENST00000377902 SRSF2Q01130 221 aaKnown RBP13.82□□□□□ -0.2
GNE-201ENST00000377902 MTURNQ8N3F0 131 aa13.82□□□□□ -0.2
GNE-201ENST00000377902 Q8N9W7 124 aa13.82□□□□□ -0.2
GNE-201ENST00000377902 KLK15Q9H2R5 256 aa13.82□□□□□ -0.2
GNE-201ENST00000377902 TRAV8-2A0A0B4J237 113 aa13.81□□□□□ -0.2
GNE-201ENST00000377902 IGF1P05019 195 aa13.81□□□□□ -0.2
GNE-201ENST00000377902 ZNF502Q8TBZ5 544 aa13.81□□□□□ -0.2
GNE-201ENST00000377902 M0R1W7 72 aa13.81□□□□□ -0.2
GNE-201ENST00000377902 VKORC1Q9BQB6 163 aa13.81□□□□□ -0.2
GNE-201ENST00000377902 ATP6V0E1O15342 81 aa13.8□□□□□ -0.2
GNE-201ENST00000377902 TIMD4Q96H15 378 aa13.8□□□□□ -0.2
GNE-201ENST00000377902 ATP5LO75964 103 aa13.8□□□□□ -0.2
GNE-201ENST00000377902 WFDC2Q14508 124 aa13.8□□□□□ -0.2
GNE-201ENST00000377902 LAGE3Q14657 143 aa13.8□□□□□ -0.2
GNE-201ENST00000377902 AMTNQ6UX39 209 aa13.8□□□□□ -0.2
GNE-201ENST00000377902 MYOZ3Q8TDC0 251 aa13.8□□□□□ -0.2
GNE-201ENST00000377902 CCDC140Q96MF4 163 aa13.8□□□□□ -0.2
GNE-201ENST00000377902 AKAP6Q13023 2319 aa13.8□□□□□ -0.2
GNE-201ENST00000377902 LCNL1Q6ZST4 164 aa13.79□□□□□ -0.2
GNE-201ENST00000377902 TM2D2Q9BX73 214 aa13.79□□□□□ -0.2
GNE-201ENST00000377902 SPANXN1Q5VSR9 72 aa13.79□□□□□ -0.2
GNE-201ENST00000377902 H3BVH4 76 aa13.78□□□□□ -0.2
GNE-201ENST00000377902 PRR9Q5T870 116 aa13.78□□□□□ -0.2
GNE-201ENST00000377902 CCDC144NLQ6NUI1 221 aa13.78□□□□□ -0.2
GNE-201ENST00000377902 IGLL5B9A064 214 aa13.78□□□□□ -0.2
GNE-201ENST00000377902 H3BMG7 143 aa13.78□□□□□ -0.2
GNE-201ENST00000377902 DEFB1P60022 68 aa13.78□□□□□ -0.2
GNE-201ENST00000377902 PTPRQQ9UMZ3 2332 aa13.78□□□□□ -0.2
GNE-201ENST00000377902 TMEM78Q5T7P6 136 aa13.78□□□□□ -0.2
GNE-201ENST00000377902 C8orf86Q6ZUL3 223 aa13.78□□□□□ -0.2
GNE-201ENST00000377902 SCGB2A1O75556 95 aa13.77□□□□□ -0.21
GNE-201ENST00000377902 EBI3Q14213 229 aa13.77□□□□□ -0.21
GNE-201ENST00000377902 SMPXQ9UHP9 88 aa13.77□□□□□ -0.21
GNE-201ENST00000377902 ATRXP46100 2492 aa13.77□□□□□ -0.21
GNE-201ENST00000377902 COL12A1Q99715 3063 aa13.77□□□□□ -0.21
GNE-201ENST00000377902 A0A087WX48 190 aa13.77□□□□□ -0.21
GNE-201ENST00000377902 SH2D6Q7Z4S9 175 aa13.77□□□□□ -0.21
GNE-201ENST00000377902 GTSF1LQ9H1H1 148 aa13.77□□□□□ -0.21
GNE-201ENST00000377902 RBAKDNA6NC62 111 aa13.76□□□□□ -0.21
GNE-201ENST00000377902 E9PLD3 99 aa13.76□□□□□ -0.21
GNE-201ENST00000377902 CCL21O00585 134 aa13.76□□□□□ -0.21
GNE-201ENST00000377902 C12orf74Q32Q52 190 aa13.76□□□□□ -0.21
GNE-201ENST00000377902 DEFB104AQ8WTQ1 72 aa13.76□□□□□ -0.21
GNE-201ENST00000377902 HIST1H4GQ99525 98 aa13.76□□□□□ -0.21
GNE-201ENST00000377902 LINC00527Q9UJ94 153 aa13.76□□□□□ -0.21
GNE-201ENST00000377902 FAM110DQ8TAY7 271 aaPredicted RBP13.75□□□□□ -0.21
GNE-201ENST00000377902 ZNF479Q96JC4 524 aa13.75□□□□□ -0.21
GNE-201ENST00000377902 SRSF1Q07955 248 aaKnown RBP eCLIP13.75□□□□□ -0.21
GNE-201ENST00000377902 FOXI2Q6ZQN5 318 aa13.75□□□□□ -0.21
GNE-201ENST00000377902 SLC50A1Q9BRV3 221 aa13.75□□□□□ -0.21
GNE-201ENST00000377902 M0R381 172 aa13.74□□□□□ -0.21
GNE-201ENST00000377902 RPL39LQ96EH5 51 aaKnown RBP13.74□□□□□ -0.21
GNE-201ENST00000377902 AJUBAQ96IF1 538 aa13.74□□□□□ -0.21
GNE-201ENST00000377902 C20orf173Q96LM9 149 aa13.74□□□□□ -0.21
GNE-201ENST00000377902 TCF15Q12870 199 aa13.73□□□□□ -0.21
GNE-201ENST00000377902 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.73□□□□□ -0.21
GNE-201ENST00000377902 ETDBQ3ZM63 59 aa13.73□□□□□ -0.21
GNE-201ENST00000377902 SPANXB1Q9NS25 103 aaPredicted RBP13.72□□□□□ -0.21
GNE-201ENST00000377902 TSSC4Q9Y5U2 329 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms