RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 SPATA12Q7Z6I5 190 aa6.9□□□□□ -1.3
UBR4-201ENST00000375218 TAF15Q92804 592 aaKnown RBP eCLIP6.9□□□□□ -1.3
UBR4-201ENST00000375218 HLA-DRB4P13762 266 aa6.9□□□□□ -1.3
UBR4-201ENST00000375218 LINC00337Q8N6G1 96 aa6.9□□□□□ -1.3
UBR4-201ENST00000375218 ZNRF1Q8ND25 227 aa6.9□□□□□ -1.3
UBR4-201ENST00000375218 HILPDAQ9Y5L2 63 aa6.9□□□□□ -1.3
UBR4-201ENST00000375218 CSAG2Q9Y5P2 127 aa6.9□□□□□ -1.3
UBR4-201ENST00000375218 HLA-DRB4X5D2U9 266 aa6.9□□□□□ -1.3
UBR4-201ENST00000375218 P0DMU3 169 aa6.9□□□□□ -1.31
UBR4-201ENST00000375218 FAM231AP0DMU4 169 aa6.9□□□□□ -1.31
UBR4-201ENST00000375218 FAM231CP0DMU5 169 aa6.9□□□□□ -1.31
UBR4-201ENST00000375218 CXCL5P42830 114 aa6.9□□□□□ -1.31
UBR4-201ENST00000375218 TMEM243Q9BU79 118 aa6.9□□□□□ -1.31
UBR4-201ENST00000375218 ARID1AO14497 2285 aa6.9□□□□□ -1.31
UBR4-201ENST00000375218 CGAP01215 116 aa6.89□□□□□ -1.31
UBR4-201ENST00000375218 GYPBP06028 91 aa6.89□□□□□ -1.31
UBR4-201ENST00000375218 ASAH2BP0C7U1 165 aa6.89□□□□□ -1.31
UBR4-201ENST00000375218 ZNF80P51504 273 aaPredicted RBP6.89□□□□□ -1.31
UBR4-201ENST00000375218 LINC00313P59037 77 aa6.89□□□□□ -1.31
UBR4-201ENST00000375218 TAS2R19P59542 299 aa6.89□□□□□ -1.31
UBR4-201ENST00000375218 TWIST1Q15672 202 aa6.89□□□□□ -1.31
UBR4-201ENST00000375218 C15orf53Q8NAA6 179 aa6.89□□□□□ -1.31
UBR4-201ENST00000375218 SPANXDQ9BXN6 97 aa6.89□□□□□ -1.31
UBR4-201ENST00000375218 MRPL18Q9H0U6 180 aaKnown RBP6.89□□□□□ -1.31
UBR4-201ENST00000375218 ZNF584Q8IVC4 421 aa6.89□□□□□ -1.31
UBR4-201ENST00000375218 TVP23CQ96ET8 276 aa6.89□□□□□ -1.31
UBR4-201ENST00000375218 IMMP1LQ96LU5 166 aa6.89□□□□□ -1.31
UBR4-201ENST00000375218 CDK5R1Q15078 307 aa6.89□□□□□ -1.31
UBR4-201ENST00000375218 H1FXQ92522 213 aaKnown RBP6.89□□□□□ -1.31
UBR4-201ENST00000375218 LOC107986453A0A1B0GWG9 222 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 LYPD6Q86Y78 171 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 OR10AC1Q8NH08 325 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 PYGO2Q9BRQ0 406 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 SERP1Q9Y6X1 66 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 NXPH3O95157 252 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 RBP4P02753 201 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 PLA2G5P39877 138 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 ESPL1Q14674 2120 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 AMN1Q8IY45 258 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 OR8B2Q96RD0 313 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 C16orf95Q9H693 158 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 KMT2BQ9UMN6 2715 aaPredicted RBP6.88□□□□□ -1.31
UBR4-201ENST00000375218 ZFP92A6NM28 416 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 F8W735 103 aaPredicted RBP6.88□□□□□ -1.31
UBR4-201ENST00000375218 TIMM17BO60830 172 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 SCGB1C2P0DMR2 95 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 RSPO1Q2MKA7 263 aaPredicted RBP6.88□□□□□ -1.31
UBR4-201ENST00000375218 BAGE3Q86Y29 109 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 BAGE2Q86Y30 109 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 AQP10Q96PS8 301 aa6.88□□□□□ -1.31
UBR4-201ENST00000375218 A0A0J9YXV3 536 aa6.87□□□□□ -1.31
UBR4-201ENST00000375218 SNRPGP62308 76 aaKnown RBP6.87□□□□□ -1.31
UBR4-201ENST00000375218 Q6ZPA2 131 aa6.87□□□□□ -1.31
UBR4-201ENST00000375218 TOMM5Q8N4H5 51 aa6.87□□□□□ -1.31
UBR4-201ENST00000375218 COPS9Q8WXC6 57 aa6.87□□□□□ -1.31
UBR4-201ENST00000375218 ARL2-SNX15V9GYD0 113 aa6.87□□□□□ -1.31
UBR4-201ENST00000375218 A0A1B0GWA3 101 aa6.87□□□□□ -1.31
UBR4-201ENST00000375218 H3BSH0 61 aa6.87□□□□□ -1.31
UBR4-201ENST00000375218 J3QLW9 94 aa6.87□□□□□ -1.31
UBR4-201ENST00000375218 NANOS3P60323 173 aaKnown RBP6.87□□□□□ -1.31
UBR4-201ENST00000375218 ZNF791Q3KP31 576 aaPredicted RBP6.87□□□□□ -1.31
UBR4-201ENST00000375218 ABHD14BQ96IU4 210 aa6.87□□□□□ -1.31
UBR4-201ENST00000375218 CMYA5Q8N3K9 4069 aa6.87□□□□□ -1.31
UBR4-201ENST00000375218 TRBV7-6A0A0J9YX20 115 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 UPK2O00526 184 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 IGKCP01834 107 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 HLA-DPB1P04440 258 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 IGLL1P15814 213 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 RPS27P42677 84 aaKnown RBP6.86□□□□□ -1.31
UBR4-201ENST00000375218 ZNF563Q8TA94 476 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 TMEM158Q8WZ71 300 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 GNB4Q9HAV0 340 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 USP24Q9UPU5 2620 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 NDUFB3O43676 98 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 PCBD1P61457 104 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 CIRBPQ14011 172 aaKnown RBP6.86□□□□□ -1.31
UBR4-201ENST00000375218 SPRNQ5BIV9 151 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 TMEM136Q6ZRR5 245 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 Q9H3A6 140 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 DPH3P1Q9H4G8 78 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 PIEZO1Q92508 2521 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 PGPA6NDG6 321 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 C17orf112F2Z3M2 114 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 SMIM13P0DJ93 91 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 C18orf32Q8TCD1 76 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 MANBALQ9NQG1 85 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 IGF2RP11717 2491 aa6.86□□□□□ -1.31
UBR4-201ENST00000375218 IGHV1-45A0A0A0MS14 117 aa6.85□□□□□ -1.31
UBR4-201ENST00000375218 SYS1-DBNDD2H3BUS1 97 aa6.85□□□□□ -1.31
UBR4-201ENST00000375218 SP5Q6BEB4 398 aaPredicted RBP6.85□□□□□ -1.31
UBR4-201ENST00000375218 Q6ZS92 163 aa6.85□□□□□ -1.31
UBR4-201ENST00000375218 LCA10Q71F78 164 aa6.85□□□□□ -1.31
UBR4-201ENST00000375218 CCL13Q99616 98 aa6.85□□□□□ -1.31
UBR4-201ENST00000375218 AHCTF1Q8WYP5 2266 aa6.85□□□□□ -1.31
UBR4-201ENST00000375218 PDZD2O15018 2839 aa6.85□□□□□ -1.31
UBR4-201ENST00000375218 PIN1P1O15428 100 aa6.85□□□□□ -1.31
UBR4-201ENST00000375218 NDUFB2O95178 105 aa6.85□□□□□ -1.31
UBR4-201ENST00000375218 CA7P43166 264 aa6.85□□□□□ -1.31
UBR4-201ENST00000375218 CAV3P56539 151 aa6.85□□□□□ -1.31
UBR4-201ENST00000375218 ZNF345Q14585 488 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms