RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 K7EP13 123 aa9.12□□□□□ -0.95
VCL-202ENST00000372755 IGLL1P15814 213 aa9.12□□□□□ -0.95
VCL-202ENST00000372755 SLC25A29Q8N8R3 303 aa9.12□□□□□ -0.95
VCL-202ENST00000372755 NOP10Q9NPE3 64 aaKnown RBP9.12□□□□□ -0.95
VCL-202ENST00000372755 NBL1P41271 181 aa9.12□□□□□ -0.95
VCL-202ENST00000372755 TMEM258P61165 79 aa9.12□□□□□ -0.95
VCL-202ENST00000372755 NDUFS7O75251 213 aa9.12□□□□□ -0.95
VCL-202ENST00000372755 XCL1P47992 114 aa9.12□□□□□ -0.95
VCL-202ENST00000372755 VPREB3Q9UKI3 123 aa9.12□□□□□ -0.95
VCL-202ENST00000372755 LENEPQ9Y5L5 61 aa9.12□□□□□ -0.95
VCL-202ENST00000372755 U3KQE9 123 aa9.12□□□□□ -0.95
VCL-202ENST00000372755 SHISA9B4DS77 424 aa9.11□□□□□ -0.95
VCL-202ENST00000372755 C1orf147Q96MC9 270 aaPredicted RBP9.11□□□□□ -0.95
VCL-202ENST00000372755 DKK4Q9UBT3 224 aa9.11□□□□□ -0.95
VCL-202ENST00000372755 ZNF491Q8N8L2 437 aa9.11□□□□□ -0.95
VCL-202ENST00000372755 PROK2Q9HC23 129 aa9.11□□□□□ -0.95
VCL-202ENST00000372755 LCTP09848 1927 aa9.11□□□□□ -0.95
VCL-202ENST00000372755 HOXB4P17483 251 aaPredicted RBP9.11□□□□□ -0.95
VCL-202ENST00000372755 POU2AF1Q16633 256 aa9.11□□□□□ -0.95
VCL-202ENST00000372755 A0A0J9YY99 117 aa9.1□□□□□ -0.95
VCL-202ENST00000372755 RNASE13Q5GAN3 156 aaKnown RBP9.1□□□□□ -0.95
VCL-202ENST00000372755 C1orf43Q9BWL3 253 aa9.1□□□□□ -0.95
VCL-202ENST00000372755 BRWD3Q6RI45 1802 aa9.1□□□□□ -0.95
VCL-202ENST00000372755 EGR2P11161 476 aaPredicted RBP9.1□□□□□ -0.95
VCL-202ENST00000372755 Q71RC1 249 aaPredicted RBP9.1□□□□□ -0.95
VCL-202ENST00000372755 RNF152Q8N8N0 203 aa9.1□□□□□ -0.95
VCL-202ENST00000372755 GREB1Q4ZG55 1949 aa9.1□□□□□ -0.95
VCL-202ENST00000372755 ETDCA0A1B0GVM5 59 aa9.1□□□□□ -0.95
VCL-202ENST00000372755 CFC1BP0CG36 223 aa9.1□□□□□ -0.95
VCL-202ENST00000372755 CFC1P0CG37 223 aa9.1□□□□□ -0.95
VCL-202ENST00000372755 SIPA1L1O43166 1804 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 DOCK6Q96HP0 2047 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 FUSP35637 526 aaKnown RBP eCLIP9.09□□□□□ -0.95
VCL-202ENST00000372755 PRSS47A8MTI9 375 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 IGHV2-5P01817 119 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 DIAPH2-AS1Q14236 149 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 C12orf74Q32Q52 190 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 C9orf66Q5T8R8 295 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 LINC01545Q5VT33 79 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 SH2D6Q7Z4S9 175 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 DEFB105AQ8NG35 78 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 Q9H8V8 135 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 KIF26BQ2KJY2 2108 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 THADAQ6YHU6 1953 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 CCL24O00175 119 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 CRYBA4P53673 196 aa9.09□□□□□ -0.95
VCL-202ENST00000372755 PRR20EP86478 221 aa9.09□□□□□ -0.96
VCL-202ENST00000372755 PRR20CP86479 221 aa9.09□□□□□ -0.96
VCL-202ENST00000372755 PRR20DP86480 221 aa9.09□□□□□ -0.96
VCL-202ENST00000372755 PRR20BP86481 221 aa9.09□□□□□ -0.96
VCL-202ENST00000372755 PRR20AP86496 221 aa9.09□□□□□ -0.96
VCL-202ENST00000372755 DYNAPQ8N1N2 210 aa9.09□□□□□ -0.96
VCL-202ENST00000372755 WNK3Q9BYP7 1800 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 ZNF503-AS2A6NEH8 195 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 GNRH2O43555 120 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 DEFB112Q30KQ8 113 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 Q6ZQT7 251 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 C15orf53Q8NAA6 179 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 DKK2Q9UBU2 259 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 GAGE12HA6NDE8 117 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 BUB3O43684 328 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 BAALC-AS2P0C853 105 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.08□□□□□ -0.96
VCL-202ENST00000372755 IGKV2-29A2NJV5 120 aaPredicted RBP9.08□□□□□ -0.96
VCL-202ENST00000372755 K7ERJ3 54 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 RPL18AQ02543 176 aaKnown RBP9.08□□□□□ -0.96
VCL-202ENST00000372755 WIPF2Q8TF74 440 aaPredicted RBP9.08□□□□□ -0.96
VCL-202ENST00000372755 C16orf74Q96GX8 76 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 FAM215AQ9Y5M1 114 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 LY6G6EA0A0G2JKS1 128 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 H3BMG7 143 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 ACYP1P07311 99 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 C10orf91Q5T1B1 145 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 NTN5Q8WTR8 489 aaPredicted RBP9.08□□□□□ -0.96
VCL-202ENST00000372755 CITED1Q99966 193 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 AGPAT4-IT1Q9H0P7 198 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 ICOSQ9Y6W8 199 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 U3KQA8 63 aa9.08□□□□□ -0.96
VCL-202ENST00000372755 FREM3P0C091 2139 aa9.07□□□□□ -0.96
VCL-202ENST00000372755 FOXE3Q13461 319 aa9.07□□□□□ -0.96
VCL-202ENST00000372755 DOCK3Q8IZD9 2030 aa9.07□□□□□ -0.96
VCL-202ENST00000372755 WIPF3A6NGB9 483 aa9.07□□□□□ -0.96
VCL-202ENST00000372755 TET1Q8NFU7 2136 aa9.07□□□□□ -0.96
VCL-202ENST00000372755 IGHV2-70P01814 119 aa9.07□□□□□ -0.96
VCL-202ENST00000372755 RBM3P98179 157 aaKnown RBP9.07□□□□□ -0.96
VCL-202ENST00000372755 ZNF503Q96F45 646 aa9.07□□□□□ -0.96
VCL-202ENST00000372755 Q9HAA7 133 aa9.07□□□□□ -0.96
VCL-202ENST00000372755 TIRAPP58753 221 aa9.07□□□□□ -0.96
VCL-202ENST00000372755 TRAV4A0A0B4J268 109 aa9.06□□□□□ -0.96
VCL-202ENST00000372755 H3BQ85 93 aa9.06□□□□□ -0.96
VCL-202ENST00000372755 MRPL23Q16540 153 aaKnown RBP9.06□□□□□ -0.96
VCL-202ENST00000372755 CAMK2N2Q96S95 79 aa9.06□□□□□ -0.96
VCL-202ENST00000372755 F6UB75 175 aa9.06□□□□□ -0.96
VCL-202ENST00000372755 IGHV4-59P01825 116 aa9.06□□□□□ -0.96
VCL-202ENST00000372755 K7EQD1 137 aa9.06□□□□□ -0.96
VCL-202ENST00000372755 IGLC7A0M8Q6 106 aa9.06□□□□□ -0.96
VCL-202ENST00000372755 MAJINQ3KP22 176 aa9.06□□□□□ -0.96
VCL-202ENST00000372755 PLA2G2CQ5R387 149 aa9.06□□□□□ -0.96
VCL-202ENST00000372755 ALPK2Q86TB3 2170 aa9.05□□□□□ -0.96
VCL-202ENST00000372755 LRRK1Q38SD2 2015 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 488.4 ms