RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 VOPP1Q96AW1 172 aa18.96■□□□□ 0.62
RAPGEF1-203ENST00000372195 NLRC5Q86WI3 1866 aa18.95■□□□□ 0.62
RAPGEF1-203ENST00000372195 ETV2O00321 342 aaPredicted RBP18.95■□□□□ 0.62
RAPGEF1-203ENST00000372195 C3orf56Q8N813 242 aa18.95■□□□□ 0.62
RAPGEF1-203ENST00000372195 CFHR4Q92496 578 aa18.95■□□□□ 0.62
RAPGEF1-203ENST00000372195 RNF114Q9Y508 228 aa18.95■□□□□ 0.62
RAPGEF1-203ENST00000372195 FOXE3Q13461 319 aa18.94■□□□□ 0.62
RAPGEF1-203ENST00000372195 PRB1P04280 392 aa18.94■□□□□ 0.62
RAPGEF1-203ENST00000372195 NDUFA12Q9UI09 145 aa18.94■□□□□ 0.62
RAPGEF1-203ENST00000372195 HEATR5AQ86XA9 2040 aa18.94■□□□□ 0.62
RAPGEF1-203ENST00000372195 NDUFA4O00483 81 aa18.94■□□□□ 0.62
RAPGEF1-203ENST00000372195 IGLC1P0CG04 106 aa18.94■□□□□ 0.62
RAPGEF1-203ENST00000372195 THAP8Q8NA92 274 aa18.94■□□□□ 0.62
RAPGEF1-203ENST00000372195 TMEM14CQ9P0S9 112 aa18.94■□□□□ 0.62
RAPGEF1-203ENST00000372195 NDUFS7O75251 213 aa18.93■□□□□ 0.62
RAPGEF1-203ENST00000372195 DYNAPQ8N1N2 210 aa18.93■□□□□ 0.62
RAPGEF1-203ENST00000372195 PLXNA2O75051 1894 aa18.93■□□□□ 0.62
RAPGEF1-203ENST00000372195 F8W1H4 67 aa18.93■□□□□ 0.62
RAPGEF1-203ENST00000372195 LGALS9BQ3B8N2 356 aa18.93■□□□□ 0.62
RAPGEF1-203ENST00000372195 LGALS9CQ6DKI2 356 aa18.93■□□□□ 0.62
RAPGEF1-203ENST00000372195 MRAPQ8TCY5 172 aa18.93■□□□□ 0.62
RAPGEF1-203ENST00000372195 PPDPFLQ8WWR9 84 aa18.93■□□□□ 0.62
RAPGEF1-203ENST00000372195 TMEM243Q9BU79 118 aa18.92■□□□□ 0.62
RAPGEF1-203ENST00000372195 KMT2EQ8IZD2 1858 aa18.92■□□□□ 0.62
RAPGEF1-203ENST00000372195 TINCRA0A1B0GVN0 87 aa18.92■□□□□ 0.62
RAPGEF1-203ENST00000372195 DOCK8Q8NF50 2099 aa18.92■□□□□ 0.62
RAPGEF1-203ENST00000372195 FAM231DQ6ZW35 169 aa18.92■□□□□ 0.62
RAPGEF1-203ENST00000372195 GATA1P15976 413 aaPredicted RBP18.91■□□□□ 0.62
RAPGEF1-203ENST00000372195 FAM215AQ9Y5M1 114 aa18.91■□□□□ 0.62
RAPGEF1-203ENST00000372195 GRNP28799 593 aaKnown RBP18.91■□□□□ 0.62
RAPGEF1-203ENST00000372195 HAMPP81172 84 aa18.91■□□□□ 0.62
RAPGEF1-203ENST00000372195 RITA1Q96K30 269 aa18.91■□□□□ 0.62
RAPGEF1-203ENST00000372195 IGF2BP2-AS1Q96M15 143 aa18.91■□□□□ 0.62
RAPGEF1-203ENST00000372195 SCRT2Q9NQ03 307 aa18.91■□□□□ 0.62
RAPGEF1-203ENST00000372195 CITED1Q99966 193 aa18.91■□□□□ 0.62
RAPGEF1-203ENST00000372195 FRMPD3Q5JV73 1810 aa18.91■□□□□ 0.62
RAPGEF1-203ENST00000372195 IFITM1P13164 125 aa18.9■□□□□ 0.62
RAPGEF1-203ENST00000372195 RPL32P62910 135 aaKnown RBP18.9■□□□□ 0.62
RAPGEF1-203ENST00000372195 CR1LQ2VPA4 569 aa18.9■□□□□ 0.62
RAPGEF1-203ENST00000372195 CARD19Q96LW7 228 aa18.9■□□□□ 0.62
RAPGEF1-203ENST00000372195 LTAP01374 205 aa18.9■□□□□ 0.62
RAPGEF1-203ENST00000372195 HOXB4P17483 251 aaPredicted RBP18.9■□□□□ 0.62
RAPGEF1-203ENST00000372195 K7EMI3 77 aa18.9■□□□□ 0.62
RAPGEF1-203ENST00000372195 IGLV1-44P01699 117 aa18.9■□□□□ 0.62
RAPGEF1-203ENST00000372195 TRBV20-1A0A075B6N2 111 aa18.89■□□□□ 0.61
RAPGEF1-203ENST00000372195 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.89■□□□□ 0.61
RAPGEF1-203ENST00000372195 IGKV2-29A2NJV5 120 aaPredicted RBP18.89■□□□□ 0.61
RAPGEF1-203ENST00000372195 GAGE12HA6NDE8 117 aa18.89■□□□□ 0.61
RAPGEF1-203ENST00000372195 RHODO00212 210 aa18.89■□□□□ 0.61
RAPGEF1-203ENST00000372195 EGR2P11161 476 aaPredicted RBP18.89■□□□□ 0.61
RAPGEF1-203ENST00000372195 SMIM2Q9BVW6 85 aa18.89■□□□□ 0.61
RAPGEF1-203ENST00000372195 CEACAM8P31997 349 aaPredicted RBP18.89■□□□□ 0.61
RAPGEF1-203ENST00000372195 NKAPP1Q8N9T2 125 aa18.89■□□□□ 0.61
RAPGEF1-203ENST00000372195 DEFB136Q30KP8 78 aa18.88■□□□□ 0.61
RAPGEF1-203ENST00000372195 IGHV7-4-1A0A0J9YVY3 117 aa18.88■□□□□ 0.61
RAPGEF1-203ENST00000372195 ZNF491Q8N8L2 437 aa18.88■□□□□ 0.61
RAPGEF1-203ENST00000372195 INTS1Q8N201 2190 aaKnown RBP18.87■□□□□ 0.61
RAPGEF1-203ENST00000372195 PRO1854Q9UHT4 67 aa18.87■□□□□ 0.61
RAPGEF1-203ENST00000372195 A0A0J9YY99 117 aa18.87■□□□□ 0.61
RAPGEF1-203ENST00000372195 LINC00311Q8N616 119 aa18.87■□□□□ 0.61
RAPGEF1-203ENST00000372195 KIAA1671Q9BY89 1806 aa18.87■□□□□ 0.61
RAPGEF1-203ENST00000372195 CCL25O15444 150 aa18.87■□□□□ 0.61
RAPGEF1-203ENST00000372195 TMEM126AQ9H061 195 aa18.87■□□□□ 0.61
RAPGEF1-203ENST00000372195 PRSS29PA6NIE9 313 aa18.86■□□□□ 0.61
RAPGEF1-203ENST00000372195 OR11H6Q8NGC7 330 aa18.86■□□□□ 0.61
RAPGEF1-203ENST00000372195 CTSZQ9UBR2 303 aa18.86■□□□□ 0.61
RAPGEF1-203ENST00000372195 PCP2Q8IVA1 136 aa18.86■□□□□ 0.61
RAPGEF1-203ENST00000372195 FGF23Q9GZV9 251 aaPredicted RBP18.86■□□□□ 0.61
RAPGEF1-203ENST00000372195 CRLF1O75462 422 aa18.86■□□□□ 0.61
RAPGEF1-203ENST00000372195 K7EM74 188 aa18.86■□□□□ 0.61
RAPGEF1-203ENST00000372195 IGLV3-1P01715 115 aa18.86■□□□□ 0.61
RAPGEF1-203ENST00000372195 RBMY1FQ15415 496 aaKnown RBP18.85■□□□□ 0.61
RAPGEF1-203ENST00000372195 NOP10Q9NPE3 64 aaKnown RBP18.85■□□□□ 0.61
RAPGEF1-203ENST00000372195 DIDO1Q9BTC0 2240 aaKnown RBP18.85■□□□□ 0.61
RAPGEF1-203ENST00000372195 C22orf46C9J442 243 aa18.85■□□□□ 0.61
RAPGEF1-203ENST00000372195 C12orf74Q32Q52 190 aa18.85■□□□□ 0.61
RAPGEF1-203ENST00000372195 J3QQQ9 107 aa18.85■□□□□ 0.61
RAPGEF1-203ENST00000372195 ANGP03950 147 aaKnown RBP18.84■□□□□ 0.61
RAPGEF1-203ENST00000372195 PRR20EP86478 221 aa18.84■□□□□ 0.61
RAPGEF1-203ENST00000372195 PRR20CP86479 221 aa18.84■□□□□ 0.61
RAPGEF1-203ENST00000372195 PRR20DP86480 221 aa18.84■□□□□ 0.61
RAPGEF1-203ENST00000372195 PRR20BP86481 221 aa18.84■□□□□ 0.61
RAPGEF1-203ENST00000372195 PRR20AP86496 221 aa18.84■□□□□ 0.61
RAPGEF1-203ENST00000372195 C11orf53Q8IXP5 236 aa18.84■□□□□ 0.61
RAPGEF1-203ENST00000372195 GATA3P23771 443 aa18.84■□□□□ 0.61
RAPGEF1-203ENST00000372195 F8VRH5 84 aa18.84■□□□□ 0.61
RAPGEF1-203ENST00000372195 Q6ZQT7 251 aa18.83■□□□□ 0.61
RAPGEF1-203ENST00000372195 XCL1P47992 114 aa18.83■□□□□ 0.6
RAPGEF1-203ENST00000372195 APRG1Q8IVJ8 170 aa18.83■□□□□ 0.6
RAPGEF1-203ENST00000372195 PRSS33Q8NF86 280 aa18.83■□□□□ 0.6
RAPGEF1-203ENST00000372195 IGLV2-23P01705 113 aa18.82■□□□□ 0.6
RAPGEF1-203ENST00000372195 NUPR1O60356 82 aa18.82■□□□□ 0.6
RAPGEF1-203ENST00000372195 IGLC7A0M8Q6 106 aa18.82■□□□□ 0.6
RAPGEF1-203ENST00000372195 INAFM2P0DMQ5 153 aa18.82■□□□□ 0.6
RAPGEF1-203ENST00000372195 IGFL3Q6UXB1 125 aa18.82■□□□□ 0.6
RAPGEF1-203ENST00000372195 RPL39LQ96EH5 51 aaKnown RBP18.81■□□□□ 0.6
RAPGEF1-203ENST00000372195 DOCK7Q96N67 2140 aa18.81■□□□□ 0.6
RAPGEF1-203ENST00000372195 SHISA9B4DS77 424 aa18.81■□□□□ 0.6
RAPGEF1-203ENST00000372195 IGHV4-59P01825 116 aa18.81■□□□□ 0.6
RAPGEF1-203ENST00000372195 C11orf52Q96A22 123 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 330.8 ms