RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CT45A10P0DMU9 189 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 IGLC2P0DOY2 106 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 IGLC3P0DOY3 106 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 PSG1P11464 419 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 NTF3P20783 257 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 HNRNPA3P51991 378 aaKnown RBP7.97□□□□□ -1.13
COL5A1-202ENST00000371820 EGFEM1PQ0D2K5 195 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 MRGPRG-AS1Q2M3A8 158 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 PRR27Q6MZM9 219 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 PET117Q6UWS5 81 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 ZNF562Q6V9R5 426 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 ZNF491Q8N8L2 437 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 MYOZ3Q8TDC0 251 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 RAX2Q96IS3 184 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 SHANK2-AS3Q9BTD1 123 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 ST20Q9HBF5 79 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 TRAV34A0A0B4J273 112 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 A0A1B0GUT8 65 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 NPIPB5A8MRT5 1133 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 TEX22C9J3V5 150 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 ZNF25P17030 456 aaPredicted RBP7.96□□□□□ -1.14
COL5A1-202ENST00000371820 BMI1P35226 326 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 LYZP61626 148 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 SLAQ13239 276 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 DEFB136Q30KP8 78 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 MORN5Q5VZ52 161 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 UNQ5815/PRO19632Q6UWF5 114 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 OR11H1Q8NG94 326 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 ARPC1AQ92747 370 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 LINC00479Q96M42 142 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 DUX3Q96PT4 197 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 MAP1LC3CQ9BXW4 147 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 GOLT1BQ9Y3E0 138 aa7.96□□□□□ -1.14
COL5A1-202ENST00000371820 COL7A1Q02388 2944 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 TRBV19A0A075B6N1 114 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 WI2-2373I1.2A0A1W2PRP0 233 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 H3BRN7 92 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 H3BUA1 57 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 EREGO14944 169 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 DLEU1O43261 78 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 LEPROTL1O95214 131 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 RPL7P18124 248 aaKnown RBP7.95□□□□□ -1.14
COL5A1-202ENST00000371820 CAMPP49913 170 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 INSL3P51460 131 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 KRTAP10-11P60412 298 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 NDPQ00604 133 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 FHL3Q13643 280 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 LINC01559Q495D7 138 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 C10orf55Q5SWW7 151 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 RNASEKQ6P5S7 137 aaKnown RBP7.95□□□□□ -1.14
COL5A1-202ENST00000371820 C16orf54Q6UWD8 224 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 Q6ZN92 141 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 COX8CQ7Z4L0 72 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 Q8N976 141 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 OR1N2Q8NGR9 330 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 KLK15Q9H2R5 256 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 CLEC5AQ9NY25 188 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 LAMTOR2Q9Y2Q5 125 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 RYR3Q15413 4870 aa7.95□□□□□ -1.14
COL5A1-202ENST00000371820 LOC102724200A0A096LPH7 203 aaPredicted RBP7.94□□□□□ -1.14
COL5A1-202ENST00000371820 GNG7O60262 68 aa7.94□□□□□ -1.14
COL5A1-202ENST00000371820 NDUFB8O95169 186 aa7.94□□□□□ -1.14
COL5A1-202ENST00000371820 LGALS1P09382 135 aaKnown RBP7.94□□□□□ -1.14
COL5A1-202ENST00000371820 HOXD3P31249 432 aaPredicted RBP7.94□□□□□ -1.14
COL5A1-202ENST00000371820 FCGR2BP31994 310 aaPredicted RBP7.94□□□□□ -1.14
COL5A1-202ENST00000371820 SSBP2P81877 361 aaPredicted RBP7.94□□□□□ -1.14
COL5A1-202ENST00000371820 PSG3Q16557 428 aa7.94□□□□□ -1.14
COL5A1-202ENST00000371820 C19orf54Q5BKX5 351 aa7.94□□□□□ -1.14
COL5A1-202ENST00000371820 Q86TA4 180 aa7.94□□□□□ -1.14
COL5A1-202ENST00000371820 TTC9CQ8N5M4 171 aa7.94□□□□□ -1.14
COL5A1-202ENST00000371820 ORAOV1Q8WV07 137 aa7.94□□□□□ -1.14
COL5A1-202ENST00000371820 PSG8Q9UQ74 426 aa7.94□□□□□ -1.14
COL5A1-202ENST00000371820 A0A0G2JLM5 398 aa7.93□□□□□ -1.14
COL5A1-202ENST00000371820 DEFB121Q5J5C9 76 aa7.93□□□□□ -1.14
COL5A1-202ENST00000371820 SPATA12Q7Z6I5 190 aa7.93□□□□□ -1.14
COL5A1-202ENST00000371820 PRNTQ86SH4 94 aa7.93□□□□□ -1.14
COL5A1-202ENST00000371820 RNF125Q96EQ8 232 aa7.93□□□□□ -1.14
COL5A1-202ENST00000371820 PGLYRP4Q96LB8 373 aa7.93□□□□□ -1.14
COL5A1-202ENST00000371820 RCHY1Q96PM5 261 aa7.93□□□□□ -1.14
COL5A1-202ENST00000371820 ATP6V0BQ99437 205 aa7.93□□□□□ -1.14
COL5A1-202ENST00000371820 MRPL36Q9P0J6 103 aaKnown RBP7.93□□□□□ -1.14
COL5A1-202ENST00000371820 TENM3Q9P273 2699 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 C2orf70A6NJV1 201 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 F2Z2F3 143 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 LINC01619G3V211 115 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 OVOL1O14753 267 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 CA1P00915 261 aaPredicted RBP7.92□□□□□ -1.14
COL5A1-202ENST00000371820 TRGV3P03979 118 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 FRMD6-AS1P0C7T7 363 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 EGR2P11161 476 aaPredicted RBP7.92□□□□□ -1.14
COL5A1-202ENST00000371820 GNG5P63218 68 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 ZNF493Q6ZR52 646 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 TCF24Q7RTU0 167 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 FAM19A2Q8N3H0 131 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 ZNF414Q96IQ9 312 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 TPSG1Q9NRR2 321 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 RPH3ALQ9UNE2 315 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 CBY1Q9Y3M2 126 aa7.92□□□□□ -1.14
COL5A1-202ENST00000371820 SYS1-DBNDD2H3BUS1 97 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 K7EIM0 57 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms