RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 MS4A6AQ9H2W1 248 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 TRBV6-1A0A0K0K1D8 114 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 TMEM238LA0A1B0GVL6 79 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 TMEM89A2RUT3 159 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 A6NJY4 79 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 IGHV4-59P01825 116 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 IGHG2P01859 326 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 IFI27L1Q96BM0 104 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 C8orf49Q96NF6 230 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 SMPXQ9UHP9 88 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 OR11H12B2RN74 326 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 LINC01619G3V211 115 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 BUB3O43684 328 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 ASPHD1Q5U4P2 390 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 FAM104BQ5XKR9 115 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 OR11H1Q8NG94 326 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 OR11H2Q8NH07 326 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 FOXC2Q99958 501 aa4.15□□□□□ -1.74
SMNDC1-202ENST00000369603 CD5LO43866 347 aa4.15□□□□□ -1.75
SMNDC1-202ENST00000369603 FOXE3Q13461 319 aa4.15□□□□□ -1.75
SMNDC1-202ENST00000369603 AMN1Q8IY45 258 aa4.15□□□□□ -1.75
SMNDC1-202ENST00000369603 C17orf77Q96MU5 243 aa4.15□□□□□ -1.75
SMNDC1-202ENST00000369603 CYSLTR1Q9Y271 337 aa4.15□□□□□ -1.75
SMNDC1-202ENST00000369603 FRMD6-AS1P0C7T7 363 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 LOXL1Q08397 574 aaPredicted RBP4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 LAGE3Q14657 143 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 LRRC75A-AS1Q8N1F1 130 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 OR1N2Q8NGR9 330 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 TMEM160Q9NX00 188 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 A0A1B0GV72 72 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 UBE2L6O14933 153 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 HOXA3O43365 443 aaPredicted RBP4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 PRB4P10163 310 aaPredicted RBP4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 CDKN1BP46527 198 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 Q1RN00 199 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 ZNF503Q96F45 646 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 MRAP2Q96G30 205 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 HIST1H4GQ99525 98 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 PCSK5Q92824 1860 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 PTPRBP23467 1997 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 TRAV12-3A0A0B4J271 114 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 A6NDX4 124 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 LGALS1P09382 135 aaKnown RBP4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 ZNF415Q09FC8 603 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 VGLL1Q99990 258 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 CSPG4Q6UVK1 2322 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 TRAV8-6A0A0B4J262 113 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 DPM2O94777 84 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 NCR2O95944 276 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 EVI2AP22794 236 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 BLCAPP62952 87 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 HSD52Q0P140 79 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 PLXNB1O43157 2135 aa4.14□□□□□ -1.75
SMNDC1-202ENST00000369603 LOC107984156A0A0G2JMH3 177 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 K7EMT4 169 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 SAP30O75446 220 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 INSP01308 110 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 LGALS3P17931 250 aaKnown RBP4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 TCTEX1D4Q5JR98 221 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 C16orf54Q6UWD8 224 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 ARL17AQ8IVW1 177 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 C11orf44Q8N8P7 122 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 OR5A1Q8NGJ0 315 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 AGPAT4-IT1Q9H0P7 198 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 RNF114Q9Y508 228 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 TMEM213A2RRL7 107 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 CDSNQ15517 529 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 DYNAPQ8N1N2 210 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 C1QTNF4Q9BXJ3 329 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 NHP2Q9NX24 153 aaKnown RBP4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 ZNF256Q9Y2P7 627 aaPredicted RBP4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 RANBP2P49792 3224 aaKnown RBP4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 SPTBN4Q9H254 2564 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 VCYO14598 125 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 TNFRSF6BO95407 300 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 IGF1P05019 195 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 ESDP10768 282 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 IFI27P40305 119 aaPredicted RBP4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 DEFB131AP59861 70 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 KLF5Q13887 457 aaPredicted RBP4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 GEMIN7Q9H840 131 aaKnown RBP4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 C5orf42Q9H799 3197 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 NOTCH3Q9UM47 2321 aa4.13□□□□□ -1.75
SMNDC1-202ENST00000369603 HIVEP3Q5T1R4 2406 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 KIR3DS1Q14943 382 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 BVES-AS1Q5T3Y7 98 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 Q8N6K4 173 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 C14orf178Q8N769 122 aaPredicted RBP4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 IGHV1-24A0A0C4DH33 117 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 A0A1B0GWB2 263 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 FXYD7P58549 80 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 NSUN5P1Q3KNT7 163 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 C19orf54Q5BKX5 351 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 SAMD5Q5TGI4 173 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 GTSCR1Q86UQ5 136 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 GPHB5Q86YW7 130 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 OR9G4Q8NGQ1 327 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 WFDC12Q8WWY7 111 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 NRGNQ92686 78 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 UBE2E2Q96LR5 201 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms