RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 F8P00451 2351 aa7.22□□□□□ -1.25
TOP1-201ENST00000361337 NPIPB5A8MRT5 1133 aa7.22□□□□□ -1.25
TOP1-201ENST00000361337 CRXO43186 299 aaPredicted RBP7.22□□□□□ -1.25
TOP1-201ENST00000361337 VMA21Q3ZAQ7 101 aa7.22□□□□□ -1.25
TOP1-201ENST00000361337 SLC25A48Q6ZT89 311 aaKnown RBP7.22□□□□□ -1.25
TOP1-201ENST00000361337 C11orf44Q8N8P7 122 aa7.22□□□□□ -1.25
TOP1-201ENST00000361337 VGLL1Q99990 258 aa7.22□□□□□ -1.25
TOP1-201ENST00000361337 CHAC1Q9BUX1 264 aa7.22□□□□□ -1.25
TOP1-201ENST00000361337 MS4A6AQ9H2W1 248 aa7.22□□□□□ -1.25
TOP1-201ENST00000361337 COX8AP10176 69 aa7.21□□□□□ -1.25
TOP1-201ENST00000361337 S100A4P26447 101 aaKnown RBP7.21□□□□□ -1.25
TOP1-201ENST00000361337 RBPMS2Q6ZRY4 209 aaKnown RBP7.21□□□□□ -1.25
TOP1-201ENST00000361337 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.21□□□□□ -1.25
TOP1-201ENST00000361337 CTSZQ9UBR2 303 aa7.21□□□□□ -1.25
TOP1-201ENST00000361337 RAI1Q7Z5J4 1906 aaPredicted RBP7.21□□□□□ -1.25
TOP1-201ENST00000361337 IGLV3-9A0A075B6K5 115 aa7.21□□□□□ -1.26
TOP1-201ENST00000361337 RNF223E7ERA6 249 aa7.21□□□□□ -1.26
TOP1-201ENST00000361337 CFHR2P36980 270 aa7.21□□□□□ -1.26
TOP1-201ENST00000361337 LEPP41159 167 aa7.21□□□□□ -1.26
TOP1-201ENST00000361337 FXYD2P54710 66 aa7.21□□□□□ -1.26
TOP1-201ENST00000361337 MLST8Q9BVC4 326 aa7.21□□□□□ -1.26
TOP1-201ENST00000361337 RPUSD1Q9UJJ7 312 aaKnown RBP7.21□□□□□ -1.26
TOP1-201ENST00000361337 TRAV40A0A0B4J280 105 aa7.21□□□□□ -1.26
TOP1-201ENST00000361337 TMEM189A5PLL7 270 aa7.21□□□□□ -1.26
TOP1-201ENST00000361337 INSL3P51460 131 aa7.21□□□□□ -1.26
TOP1-201ENST00000361337 RHOGP84095 191 aa7.21□□□□□ -1.26
TOP1-201ENST00000361337 NUP37Q8NFH4 326 aa7.21□□□□□ -1.26
TOP1-201ENST00000361337 SCRT2Q9NQ03 307 aa7.21□□□□□ -1.26
TOP1-201ENST00000361337 TCRBV4S1A1TA0A5B7 111 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 FAM106CPP0CH98 169 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 FAM106AQ4KMX7 169 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 DKK2Q9UBU2 259 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 TRAV12-3A0A0B4J271 114 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 F5H697 171 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 OVOL3O00110 214 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 MGPP08493 103 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 ARMS2P0C7Q2 107 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 CCDC144NLQ6NUI1 221 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 AMN1Q8IY45 258 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 EXOC3-AS1Q8N2X6 119 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 C10orf126Q8N4M7 172 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 RAX2Q96IS3 184 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 GPR82Q96P67 336 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 SPAG8Q99932 426 aaPredicted RBP7.2□□□□□ -1.26
TOP1-201ENST00000361337 PIMREGQ9BSJ6 248 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 PRSS22Q9GZN4 317 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 AAMDCQ9H7C9 122 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 ITPR3Q14573 2671 aa7.2□□□□□ -1.26
TOP1-201ENST00000361337 GAGE5Q13069 117 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 GAGE6Q13070 117 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 KLF17Q5JT82 389 aaPredicted RBP7.19□□□□□ -1.26
TOP1-201ENST00000361337 IL17RELQ6ZVW7 336 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 ZNF256Q9Y2P7 627 aaPredicted RBP7.19□□□□□ -1.26
TOP1-201ENST00000361337 C19orf71A6NCJ1 209 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 ZNF785A8K8V0 405 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 HAX1O00165 279 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 MT-ATP8P03928 68 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 SHISA2Q6UWI4 295 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 CACNG8Q8WXS5 425 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 GCN1Q92616 2671 aaKnown RBP7.19□□□□□ -1.26
TOP1-201ENST00000361337 IGHV3-49A0A0A0MS15 119 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 A0A1W2PPI3 338 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 TMEM8BA6NDV4 472 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 RS1O15537 224 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 HOXA3O43365 443 aaPredicted RBP7.19□□□□□ -1.26
TOP1-201ENST00000361337 HERVK_113P61574 105 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 C2orf91Q6ZV80 131 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 ATP5L2Q7Z4Y8 100 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 OR4C13Q8NGP0 309 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 SVIPQ8NHG7 77 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 ATRQ13535 2644 aa7.19□□□□□ -1.26
TOP1-201ENST00000361337 IGHV3-64A0A075B6Q5 118 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 TIMM23O14925 209 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 SIVA1O15304 175 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 EFNA4P52798 201 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 LOXL1Q08397 574 aaPredicted RBP7.18□□□□□ -1.26
TOP1-201ENST00000361337 LYRM7Q5U5X0 104 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 KLF12Q9Y4X4 402 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 LINC00312Q9Y6C7 94 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 UTP20O75691 2785 aaKnown RBP7.18□□□□□ -1.26
TOP1-201ENST00000361337 A0A1W2PPR1 153 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 LTAP01374 205 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 HBDP02042 147 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 ZNF833PQ6ZTB9 187 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 MAP1LC3AQ9H492 121 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 FLNAP21333 2647 aaKnown RBP7.18□□□□□ -1.26
TOP1-201ENST00000361337 A8MWV9 139 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 IGLV2-23P01705 113 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 MRGPRG-AS1Q2M3A8 158 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 ZNF843Q8N446 348 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 OR9G4Q8NGQ1 327 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 CHCHD1Q96BP2 118 aaKnown RBP7.18□□□□□ -1.26
TOP1-201ENST00000361337 Q9H3A6 140 aa7.18□□□□□ -1.26
TOP1-201ENST00000361337 LINC01549A6NIU2 74 aa7.17□□□□□ -1.26
TOP1-201ENST00000361337 TCRAP04437 139 aa7.17□□□□□ -1.26
TOP1-201ENST00000361337 GATA3P23771 443 aa7.17□□□□□ -1.26
TOP1-201ENST00000361337 CNTFRP26992 372 aa7.17□□□□□ -1.26
TOP1-201ENST00000361337 ORMDL3Q8N138 153 aa7.17□□□□□ -1.26
TOP1-201ENST00000361337 PIP4P2Q8N4L2 257 aa7.17□□□□□ -1.26
TOP1-201ENST00000361337 TMEM213A2RRL7 107 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms