RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 C5orf17Q8NAS9 161 aa12.02□□□□□ -0.49
FAM3D-201ENST00000358781 IGHV1OR15-1A0A075B7D0 117 aa12.01□□□□□ -0.49
FAM3D-201ENST00000358781 GGTLC3B5MD39 225 aa12.01□□□□□ -0.49
FAM3D-201ENST00000358781 ATP5G1P05496 136 aa12.01□□□□□ -0.49
FAM3D-201ENST00000358781 ATP5G3P48201 142 aa12.01□□□□□ -0.49
FAM3D-201ENST00000358781 IQCF2Q8IXL9 164 aa12.01□□□□□ -0.49
FAM3D-201ENST00000358781 C11orf72Q8NBR9 251 aa12.01□□□□□ -0.49
FAM3D-201ENST00000358781 GSN-AS1Q9NRJ2 163 aa12.01□□□□□ -0.49
FAM3D-201ENST00000358781 TRAV8-1A0A0A6YYK1 113 aa12□□□□□ -0.49
FAM3D-201ENST00000358781 SERTM2A0A1B0GWG4 89 aa12□□□□□ -0.49
FAM3D-201ENST00000358781 F5H768 121 aa12□□□□□ -0.49
FAM3D-201ENST00000358781 BCL2L11O43521 198 aa12□□□□□ -0.49
FAM3D-201ENST00000358781 SUMO1P63165 101 aaKnown RBP12□□□□□ -0.49
FAM3D-201ENST00000358781 Q6AWC8 147 aa12□□□□□ -0.49
FAM3D-201ENST00000358781 TP53TG3Q9ULZ0 132 aa12□□□□□ -0.49
FAM3D-201ENST00000358781 EPPK1P58107 5090 aaKnown RBP11.99□□□□□ -0.49
FAM3D-201ENST00000358781 KANTRA0A1W2PQU2 76 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 A0A1W2PRE2 83 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 GAGE12BA1L429 117 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 GAGE7O76087 117 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 TCRAP04437 139 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 GAGE12FP0CL80 117 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 GAGE12GP0CL81 117 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 GAGE12IP0CL82 117 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 P0DMU3 169 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 FAM231AP0DMU4 169 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 FAM231CP0DMU5 169 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 Q6ZNX1 250 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 TVP23CQ96ET8 276 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 TMPRSS5Q9H3S3 457 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 EPDR1Q9UM22 224 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 DNAH10Q8IVF4 4471 aa11.99□□□□□ -0.49
FAM3D-201ENST00000358781 K7EQM0 130 aa11.98□□□□□ -0.49
FAM3D-201ENST00000358781 FGF8P55075 233 aaPredicted RBP11.98□□□□□ -0.49
FAM3D-201ENST00000358781 TCL1AP56279 114 aa11.98□□□□□ -0.49
FAM3D-201ENST00000358781 IBA57Q5T440 356 aaKnown RBP11.98□□□□□ -0.49
FAM3D-201ENST00000358781 Q6ZTI0 123 aa11.98□□□□□ -0.49
FAM3D-201ENST00000358781 C15orf53Q8NAA6 179 aa11.98□□□□□ -0.49
FAM3D-201ENST00000358781 ZNF471Q9BX82 626 aaPredicted RBP11.98□□□□□ -0.49
FAM3D-201ENST00000358781 TREM1Q9NP99 234 aa11.98□□□□□ -0.49
FAM3D-201ENST00000358781 KLF12Q9Y4X4 402 aa11.98□□□□□ -0.49
FAM3D-201ENST00000358781 MAP1LC3B2A6NCE7 125 aa11.97□□□□□ -0.49
FAM3D-201ENST00000358781 SEC11BP0C7V7 166 aa11.97□□□□□ -0.49
FAM3D-201ENST00000358781 MUC21Q5SSG8 566 aa11.97□□□□□ -0.49
FAM3D-201ENST00000358781 TMUB2Q71RG4 321 aa11.97□□□□□ -0.49
FAM3D-201ENST00000358781 TCTE3Q8IZS6 198 aa11.97□□□□□ -0.49
FAM3D-201ENST00000358781 SGK494Q96LW2 274 aa11.97□□□□□ -0.49
FAM3D-201ENST00000358781 MAP1LC3BQ9GZQ8 125 aa11.97□□□□□ -0.49
FAM3D-201ENST00000358781 FRAS1Q86XX4 4008 aa11.97□□□□□ -0.49
FAM3D-201ENST00000358781 F6UZH7 168 aa11.96□□□□□ -0.49
FAM3D-201ENST00000358781 FHITP49789 147 aa11.96□□□□□ -0.49
FAM3D-201ENST00000358781 UBE2G2P60604 165 aa11.96□□□□□ -0.49
FAM3D-201ENST00000358781 POM121L12Q8N7R1 296 aa11.96□□□□□ -0.49
FAM3D-201ENST00000358781 CYB561D1Q8N8Q1 229 aa11.96□□□□□ -0.49
FAM3D-201ENST00000358781 ATG101Q9BSB4 218 aa11.96□□□□□ -0.49
FAM3D-201ENST00000358781 NDFIP1Q9BT67 221 aa11.96□□□□□ -0.49
FAM3D-201ENST00000358781 TRGV1A0A0A0MS02 117 aa11.95□□□□□ -0.5
FAM3D-201ENST00000358781 UMAD1C9J7I0 102 aa11.95□□□□□ -0.5
FAM3D-201ENST00000358781 SPINK4O60575 86 aa11.95□□□□□ -0.5
FAM3D-201ENST00000358781 PFDN1O60925 122 aa11.95□□□□□ -0.5
FAM3D-201ENST00000358781 IGLV2-11P01706 119 aa11.95□□□□□ -0.5
FAM3D-201ENST00000358781 EIF5AP63241 154 aaKnown RBP11.95□□□□□ -0.5
FAM3D-201ENST00000358781 ZNF415Q09FC8 603 aa11.95□□□□□ -0.5
FAM3D-201ENST00000358781 FAM159AQ6UWV7 190 aa11.95□□□□□ -0.5
FAM3D-201ENST00000358781 PSG8Q9UQ74 426 aa11.95□□□□□ -0.5
FAM3D-201ENST00000358781 TRAV21A0A0B4J279 112 aa11.94□□□□□ -0.5
FAM3D-201ENST00000358781 FAM74A7A6NL05 159 aa11.94□□□□□ -0.5
FAM3D-201ENST00000358781 IFNA7P01567 189 aa11.94□□□□□ -0.5
FAM3D-201ENST00000358781 FLI1Q01543 452 aaPredicted RBP11.94□□□□□ -0.5
FAM3D-201ENST00000358781 TDRG1Q3Y452 100 aa11.94□□□□□ -0.5
FAM3D-201ENST00000358781 TMEM75Q8N9X5 138 aa11.94□□□□□ -0.5
FAM3D-201ENST00000358781 STOML3Q8TAV4 291 aa11.94□□□□□ -0.5
FAM3D-201ENST00000358781 C18orf15Q96N68 181 aa11.94□□□□□ -0.5
FAM3D-201ENST00000358781 MUC4Q99102 2169 aa11.94□□□□□ -0.5
FAM3D-201ENST00000358781 NKX6-2Q9C056 277 aaPredicted RBP11.94□□□□□ -0.5
FAM3D-201ENST00000358781 TRGV2A0A075B6R0 118 aa11.93□□□□□ -0.5
FAM3D-201ENST00000358781 FBLL1A6NHQ2 334 aaKnown RBP11.93□□□□□ -0.5
FAM3D-201ENST00000358781 HOXA5P20719 270 aa11.93□□□□□ -0.5
FAM3D-201ENST00000358781 OR5I1Q13606 314 aa11.93□□□□□ -0.5
FAM3D-201ENST00000358781 TMEM183BQ1AE95 376 aa11.93□□□□□ -0.5
FAM3D-201ENST00000358781 LGALS9BQ3B8N2 356 aa11.93□□□□□ -0.5
FAM3D-201ENST00000358781 TMEM183AQ8IXX5 376 aa11.93□□□□□ -0.5
FAM3D-201ENST00000358781 FAM213BQ8TBF2 198 aa11.93□□□□□ -0.5
FAM3D-201ENST00000358781 MDFICQ9P1T7 246 aa11.93□□□□□ -0.5
FAM3D-201ENST00000358781 NAGKQ9UJ70 344 aa11.93□□□□□ -0.5
FAM3D-201ENST00000358781 TRGV11A0A075B6L2 103 aa11.92□□□□□ -0.5
FAM3D-201ENST00000358781 TPT1P13693 172 aaKnown RBP11.92□□□□□ -0.5
FAM3D-201ENST00000358781 DPPA3Q6W0C5 159 aa11.92□□□□□ -0.5
FAM3D-201ENST00000358781 PRNTQ86SH4 94 aa11.92□□□□□ -0.5
FAM3D-201ENST00000358781 UBE2DNLQ8IWF7 75 aa11.92□□□□□ -0.5
FAM3D-201ENST00000358781 MBD3L1Q8WWY6 194 aa11.92□□□□□ -0.5
FAM3D-201ENST00000358781 C8orf49Q96NF6 230 aa11.92□□□□□ -0.5
FAM3D-201ENST00000358781 MRPL16Q9NX20 251 aaKnown RBP11.92□□□□□ -0.5
FAM3D-201ENST00000358781 TRAV26-1A0A087WT03 109 aa11.91□□□□□ -0.5
FAM3D-201ENST00000358781 PEX7O00628 323 aa11.91□□□□□ -0.5
FAM3D-201ENST00000358781 NUDT3O95989 172 aa11.91□□□□□ -0.5
FAM3D-201ENST00000358781 LGALSLQ3ZCW2 172 aaPredicted RBP11.91□□□□□ -0.5
FAM3D-201ENST00000358781 RNF212Q495C1 297 aa11.91□□□□□ -0.5
FAM3D-201ENST00000358781 SFT2D1Q8WV19 159 aa11.91□□□□□ -0.5
FAM3D-201ENST00000358781 HIST1H2BAQ96A08 127 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms