RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SMUG1Q53HV7 270 aa13.5□□□□□ -0.25
SMARCD3-202ENST00000356800 FAM162BQ5T6X4 162 aa13.5□□□□□ -0.25
SMARCD3-202ENST00000356800 OR2K2Q8NGT1 345 aa13.5□□□□□ -0.25
SMARCD3-202ENST00000356800 TSKUQ8WUA8 353 aa13.5□□□□□ -0.25
SMARCD3-202ENST00000356800 TYMSP04818 313 aa13.5□□□□□ -0.25
SMARCD3-202ENST00000356800 CD33P20138 364 aa13.5□□□□□ -0.25
SMARCD3-202ENST00000356800 DEFB131AP59861 70 aa13.5□□□□□ -0.25
SMARCD3-202ENST00000356800 MAP6D1Q9H9H5 199 aa13.5□□□□□ -0.25
SMARCD3-202ENST00000356800 TRBV7-9A0A0J9YWB2 115 aa13.49□□□□□ -0.25
SMARCD3-202ENST00000356800 A0A0J9YX75 114 aa13.49□□□□□ -0.25
SMARCD3-202ENST00000356800 CA1P00915 261 aaPredicted RBP13.49□□□□□ -0.25
SMARCD3-202ENST00000356800 WFDC9Q8NEX5 89 aa13.49□□□□□ -0.25
SMARCD3-202ENST00000356800 A8MWL6 223 aa13.48□□□□□ -0.25
SMARCD3-202ENST00000356800 RPS10P46783 165 aaKnown RBP13.48□□□□□ -0.25
SMARCD3-202ENST00000356800 ZNF124Q15973 351 aa13.48□□□□□ -0.25
SMARCD3-202ENST00000356800 ODF3L2Q3SX64 289 aa13.48□□□□□ -0.25
SMARCD3-202ENST00000356800 SAV1Q9H4B6 383 aaPredicted RBP13.48□□□□□ -0.25
SMARCD3-202ENST00000356800 NOTCH3Q9UM47 2321 aa13.48□□□□□ -0.25
SMARCD3-202ENST00000356800 FAM231BA6NCW3 169 aa13.47□□□□□ -0.25
SMARCD3-202ENST00000356800 SH2D1AO60880 128 aa13.47□□□□□ -0.25
SMARCD3-202ENST00000356800 FAM19A4Q96LR4 140 aa13.47□□□□□ -0.25
SMARCD3-202ENST00000356800 GFRA4Q9GZZ7 299 aa13.47□□□□□ -0.25
SMARCD3-202ENST00000356800 SRD5A3Q9H8P0 318 aa13.47□□□□□ -0.25
SMARCD3-202ENST00000356800 KNCNA6PVL3 124 aa13.47□□□□□ -0.25
SMARCD3-202ENST00000356800 ZNF80P51504 273 aaPredicted RBP13.47□□□□□ -0.25
SMARCD3-202ENST00000356800 BEAN1Q3B7T3 259 aa13.47□□□□□ -0.25
SMARCD3-202ENST00000356800 C9orf66Q5T8R8 295 aa13.47□□□□□ -0.25
SMARCD3-202ENST00000356800 FOXI2Q6ZQN5 318 aa13.47□□□□□ -0.25
SMARCD3-202ENST00000356800 OR2D3Q8NGH3 330 aa13.47□□□□□ -0.25
SMARCD3-202ENST00000356800 NAT8BQ9UHF3 227 aa13.47□□□□□ -0.25
SMARCD3-202ENST00000356800 FABP5P3A8MUU1 101 aa13.46□□□□□ -0.26
SMARCD3-202ENST00000356800 INSL3P51460 131 aa13.46□□□□□ -0.26
SMARCD3-202ENST00000356800 EBLN2Q6P2I7 272 aa13.46□□□□□ -0.26
SMARCD3-202ENST00000356800 NEU1Q99519 415 aa13.46□□□□□ -0.26
SMARCD3-202ENST00000356800 TCL1AP56279 114 aa13.45□□□□□ -0.26
SMARCD3-202ENST00000356800 APRG1Q8IVJ8 170 aa13.45□□□□□ -0.26
SMARCD3-202ENST00000356800 ZFAND2AQ8N6M9 145 aa13.45□□□□□ -0.26
SMARCD3-202ENST00000356800 CMYA5Q8N3K9 4069 aa13.45□□□□□ -0.26
SMARCD3-202ENST00000356800 CRISP2P16562 243 aa13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 FOXA3P55318 350 aaPredicted RBP13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 RPL19P84098 196 aaKnown RBP13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 PRR9Q5T870 116 aa13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 LURAP1LQ8IV03 231 aa13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 HIGD1CA8MV81 97 aa13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 C1orf196B1AJZ1 125 aa13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 CD7P09564 240 aa13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 IGLL1P15814 213 aa13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 ACTL10Q5JWF8 245 aa13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 NUP35Q8NFH5 326 aa13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 GTSF1Q8WW33 167 aa13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 ODF3Q96PU9 254 aa13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 MDFIQ99750 246 aa13.44□□□□□ -0.26
SMARCD3-202ENST00000356800 ANK2Q01484 3957 aa13.43□□□□□ -0.26
SMARCD3-202ENST00000356800 A8MTW9 85 aa13.43□□□□□ -0.26
SMARCD3-202ENST00000356800 H3BMM0 161 aa13.43□□□□□ -0.26
SMARCD3-202ENST00000356800 IGKV3-20P01619 116 aa13.43□□□□□ -0.26
SMARCD3-202ENST00000356800 HLA-DRB4P13762 266 aa13.43□□□□□ -0.26
SMARCD3-202ENST00000356800 KIR3DS1Q14943 382 aa13.43□□□□□ -0.26
SMARCD3-202ENST00000356800 MCRIP2Q9BUT9 160 aaKnown RBP13.43□□□□□ -0.26
SMARCD3-202ENST00000356800 C19orf73Q9NVV2 129 aa13.43□□□□□ -0.26
SMARCD3-202ENST00000356800 HLA-DRB4X5D2U9 266 aa13.43□□□□□ -0.26
SMARCD3-202ENST00000356800 XKRY2A2RUG3 117 aa13.42□□□□□ -0.26
SMARCD3-202ENST00000356800 TMEM189A5PLL7 270 aa13.42□□□□□ -0.26
SMARCD3-202ENST00000356800 DUSP14O95147 198 aaKnown RBP13.42□□□□□ -0.26
SMARCD3-202ENST00000356800 AMTNQ6UX39 209 aa13.42□□□□□ -0.26
SMARCD3-202ENST00000356800 Q6ZQT7 251 aa13.42□□□□□ -0.26
SMARCD3-202ENST00000356800 OR11H12B2RN74 326 aa13.41□□□□□ -0.26
SMARCD3-202ENST00000356800 RPS20P60866 119 aaKnown RBP13.41□□□□□ -0.26
SMARCD3-202ENST00000356800 RAB5BP61020 215 aa13.41□□□□□ -0.26
SMARCD3-202ENST00000356800 LINC01559Q495D7 138 aa13.41□□□□□ -0.26
SMARCD3-202ENST00000356800 RBMY1BA6NDE4 496 aaKnown RBP13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 RBMY1EA6NEQ0 496 aaKnown RBP13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 J3KRW8 73 aa13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 PHOX2AO14813 284 aa13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 TRGC2P03986 189 aa13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 RBMY1DP0C7P1 496 aaKnown RBP13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 Q6AWC8 147 aa13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 RASL11AQ6T310 242 aa13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 ATP5L2Q7Z4Y8 100 aa13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 FAM110AQ9BQ89 295 aa13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 KLLNB2CW77 178 aa13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 WIPF1O43516 503 aa13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 COX19Q49B96 90 aa13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 WFDC10AQ9H1F0 79 aa13.4□□□□□ -0.26
SMARCD3-202ENST00000356800 GPX1P07203 203 aa13.39□□□□□ -0.27
SMARCD3-202ENST00000356800 GZMBP10144 247 aa13.39□□□□□ -0.27
SMARCD3-202ENST00000356800 ZNF575Q86XF7 245 aa13.39□□□□□ -0.27
SMARCD3-202ENST00000356800 C11orf21Q9P2W6 132 aa13.39□□□□□ -0.27
SMARCD3-202ENST00000356800 PKD1L1Q8TDX9 2849 aa13.39□□□□□ -0.27
SMARCD3-202ENST00000356800 TRAV21A0A0B4J279 112 aa13.38□□□□□ -0.27
SMARCD3-202ENST00000356800 M0R2Z0 102 aa13.38□□□□□ -0.27
SMARCD3-202ENST00000356800 SPINK4O60575 86 aa13.38□□□□□ -0.27
SMARCD3-202ENST00000356800 ORM1P02763 201 aa13.38□□□□□ -0.27
SMARCD3-202ENST00000356800 CMC4P56277 68 aaPredicted RBP13.38□□□□□ -0.27
SMARCD3-202ENST00000356800 GNB1LQ9BYB4 327 aa13.38□□□□□ -0.27
SMARCD3-202ENST00000356800 IGKV3D-20A0A0C4DH25 116 aa13.37□□□□□ -0.27
SMARCD3-202ENST00000356800 RNASE4P34096 147 aaKnown RBP13.37□□□□□ -0.27
SMARCD3-202ENST00000356800 LEPP41159 167 aa13.37□□□□□ -0.27
SMARCD3-202ENST00000356800 MRPL54Q6P161 138 aaKnown RBP13.37□□□□□ -0.27
SMARCD3-202ENST00000356800 WDR73Q6P4I2 378 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms