RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 PRO1854Q9UHT4 67 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 LMO7DNF2Z398 122 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 SH2D1AO60880 128 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 IGLC6P0CF74 106 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 MDP1Q86V88 176 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 POM121L12Q8N7R1 296 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 SPANXCQ9NY87 97 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 INTS1Q8N201 2190 aaKnown RBP12.24□□□□□ -0.45
RTN3-205ENST00000356000 DOCK7Q96N67 2140 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 EPG5Q9HCE0 2579 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 UQCRQO14949 82 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 CGB3P0DN86 165 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 CGB7P0DN87 165 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 EBI3Q14213 229 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 RUSC1-AS1Q66K80 236 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 TMEM219Q86XT9 240 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 LINC00526Q96FQ7 95 aa12.24□□□□□ -0.45
RTN3-205ENST00000356000 SCRG1O75711 98 aa12.23□□□□□ -0.45
RTN3-205ENST00000356000 LAGE3Q14657 143 aa12.23□□□□□ -0.45
RTN3-205ENST00000356000 IGHV1-45A0A0A0MS14 117 aa12.23□□□□□ -0.45
RTN3-205ENST00000356000 CGB1A6NKQ9 187 aa12.23□□□□□ -0.45
RTN3-205ENST00000356000 MRPS12O15235 138 aaKnown RBP12.23□□□□□ -0.45
RTN3-205ENST00000356000 GATA1P15976 413 aaPredicted RBP12.23□□□□□ -0.45
RTN3-205ENST00000356000 MFAP4P55083 255 aa12.23□□□□□ -0.45
RTN3-205ENST00000356000 TNFAIP6P98066 277 aaPredicted RBP12.23□□□□□ -0.45
RTN3-205ENST00000356000 PRR25Q96S07 402 aa12.23□□□□□ -0.45
RTN3-205ENST00000356000 CXXC4Q9H2H0 198 aa12.23□□□□□ -0.45
RTN3-205ENST00000356000 MSRB1Q9NZV6 116 aa12.23□□□□□ -0.45
RTN3-205ENST00000356000 FAM240AA0A1B0GVK7 77 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 K7EM74 188 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 EFNA4P52798 201 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 ZNF56Q15929 161 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 C17orf58Q2M2W7 97 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 TEX36Q5VZQ5 186 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 EDA2RQ9HAV5 297 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 CTSZQ9UBR2 303 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 TRBV19A0A075B6N1 114 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 F5H768 121 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 H3BMM0 161 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 P0DMU3 169 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 FAM231AP0DMU4 169 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 FAM231CP0DMU5 169 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 LINC01620Q4KN68 170 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 UBE2WQ96B02 151 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 SPANXDQ9BXN6 97 aa12.22□□□□□ -0.45
RTN3-205ENST00000356000 FAM236AA0A1B0GUQ0 79 aa12.21□□□□□ -0.45
RTN3-205ENST00000356000 FAM236BA0A1B0GV22 79 aa12.21□□□□□ -0.45
RTN3-205ENST00000356000 SIGLEC15Q6ZMC9 328 aa12.21□□□□□ -0.45
RTN3-205ENST00000356000 IMMP1LQ96LU5 166 aa12.21□□□□□ -0.45
RTN3-205ENST00000356000 CNFNQ9BYD5 112 aa12.21□□□□□ -0.45
RTN3-205ENST00000356000 MYO15AQ9UKN7 3530 aa12.21□□□□□ -0.46
RTN3-205ENST00000356000 IGHV3-30P01768 117 aa12.21□□□□□ -0.46
RTN3-205ENST00000356000 IGHV3-30-5P0DP03 117 aa12.21□□□□□ -0.46
RTN3-205ENST00000356000 SLC25A16P16260 332 aa12.21□□□□□ -0.46
RTN3-205ENST00000356000 EMP1P54849 157 aa12.21□□□□□ -0.46
RTN3-205ENST00000356000 VKORC1Q9BQB6 163 aa12.21□□□□□ -0.46
RTN3-205ENST00000356000 IMUPQ9GZP8 106 aa12.21□□□□□ -0.46
RTN3-205ENST00000356000 KLK5Q9Y337 293 aaPredicted RBP12.21□□□□□ -0.46
RTN3-205ENST00000356000 A0A0J9YY99 117 aa12.2□□□□□ -0.46
RTN3-205ENST00000356000 RBAKDNA6NC62 111 aa12.2□□□□□ -0.46
RTN3-205ENST00000356000 LYPD1Q8N2G4 141 aa12.2□□□□□ -0.46
RTN3-205ENST00000356000 TRGV11A0A075B6L2 103 aa12.2□□□□□ -0.46
RTN3-205ENST00000356000 TRBV10-2A0A0K0K1G8 114 aa12.2□□□□□ -0.46
RTN3-205ENST00000356000 IGKV1D-17A0A075B6S4 117 aa12.19□□□□□ -0.46
RTN3-205ENST00000356000 PLA2G2AP14555 144 aa12.19□□□□□ -0.46
RTN3-205ENST00000356000 COX8CQ7Z4L0 72 aa12.19□□□□□ -0.46
RTN3-205ENST00000356000 ZNRF2Q8NHG8 242 aa12.19□□□□□ -0.46
RTN3-205ENST00000356000 C17orf77Q96MU5 243 aa12.19□□□□□ -0.46
RTN3-205ENST00000356000 CD3EP07766 207 aa12.19□□□□□ -0.46
RTN3-205ENST00000356000 EGR2P11161 476 aaPredicted RBP12.19□□□□□ -0.46
RTN3-205ENST00000356000 ATXN8Q156A1 80 aa12.19□□□□□ -0.46
RTN3-205ENST00000356000 MRPL14Q6P1L8 145 aaKnown RBP12.19□□□□□ -0.46
RTN3-205ENST00000356000 C1orf162Q8NEQ5 155 aaPredicted RBP12.19□□□□□ -0.46
RTN3-205ENST00000356000 SVILO95425 2214 aa12.19□□□□□ -0.46
RTN3-205ENST00000356000 TPRP12270 2363 aaKnown RBP12.18□□□□□ -0.46
RTN3-205ENST00000356000 J3QKU1 62 aa12.18□□□□□ -0.46
RTN3-205ENST00000356000 PRB4P10163 310 aaPredicted RBP12.18□□□□□ -0.46
RTN3-205ENST00000356000 ZNF575Q86XF7 245 aa12.18□□□□□ -0.46
RTN3-205ENST00000356000 DOCK10Q96BY6 2186 aa12.18□□□□□ -0.46
RTN3-205ENST00000356000 C10orf55Q5SWW7 151 aa12.18□□□□□ -0.46
RTN3-205ENST00000356000 NEXN-AS1Q8NBZ9 246 aa12.18□□□□□ -0.46
RTN3-205ENST00000356000 TMEM167AQ8TBQ9 72 aa12.18□□□□□ -0.46
RTN3-205ENST00000356000 IGHV3-33P01772 117 aa12.17□□□□□ -0.46
RTN3-205ENST00000356000 PMVKQ15126 192 aa12.17□□□□□ -0.46
RTN3-205ENST00000356000 DTX2Q86UW9 622 aa12.17□□□□□ -0.46
RTN3-205ENST00000356000 SLC25A45Q8N413 288 aa12.17□□□□□ -0.46
RTN3-205ENST00000356000 KLF14Q8TD94 323 aaPredicted RBP12.17□□□□□ -0.46
RTN3-205ENST00000356000 COX6A1P12074 109 aa12.16□□□□□ -0.46
RTN3-205ENST00000356000 CD40P25942 277 aa12.16□□□□□ -0.46
RTN3-205ENST00000356000 LYZP61626 148 aa12.16□□□□□ -0.46
RTN3-205ENST00000356000 PVRIGQ6DKI7 326 aa12.16□□□□□ -0.46
RTN3-205ENST00000356000 CEMP1Q6PRD7 247 aaPredicted RBP12.16□□□□□ -0.46
RTN3-205ENST00000356000 ZNF843Q8N446 348 aa12.16□□□□□ -0.46
RTN3-205ENST00000356000 KLHL30-AS1Q8NEE0 82 aa12.16□□□□□ -0.46
RTN3-205ENST00000356000 CNOT1A5YKK6 2376 aaKnown RBP12.16□□□□□ -0.46
RTN3-205ENST00000356000 NAV3Q8IVL0 2385 aa12.16□□□□□ -0.46
RTN3-205ENST00000356000 BBC3Q96PG8 261 aaPredicted RBP12.16□□□□□ -0.46
RTN3-205ENST00000356000 PSMG3-AS1Q96PY0 264 aa12.16□□□□□ -0.46
RTN3-205ENST00000356000 M0R3E3 92 aa12.15□□□□□ -0.46
RTN3-205ENST00000356000 DEFB121Q5J5C9 76 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms