RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 TREM1Q9NP99 234 aa12.94□□□□□ -0.34
PDLIM7-202ENST00000355841 GOLT1BQ9Y3E0 138 aa12.94□□□□□ -0.34
PDLIM7-202ENST00000355841 ARL2-SNX15V9GYD0 113 aa12.94□□□□□ -0.34
PDLIM7-202ENST00000355841 C11orf94C9JXX5 98 aa12.93□□□□□ -0.34
PDLIM7-202ENST00000355841 GPX1P07203 203 aa12.93□□□□□ -0.34
PDLIM7-202ENST00000355841 MANBALQ9NQG1 85 aa12.93□□□□□ -0.34
PDLIM7-202ENST00000355841 A0A0J9YWU9 116 aa12.93□□□□□ -0.34
PDLIM7-202ENST00000355841 KLLNB2CW77 178 aa12.93□□□□□ -0.34
PDLIM7-202ENST00000355841 K7EQM0 130 aa12.93□□□□□ -0.34
PDLIM7-202ENST00000355841 HTN1P15515 57 aa12.93□□□□□ -0.34
PDLIM7-202ENST00000355841 CRISP2P16562 243 aa12.93□□□□□ -0.34
PDLIM7-202ENST00000355841 PRNTQ86SH4 94 aa12.93□□□□□ -0.34
PDLIM7-202ENST00000355841 LYPD6BQ8NI32 183 aa12.93□□□□□ -0.34
PDLIM7-202ENST00000355841 PSG8Q9UQ74 426 aa12.93□□□□□ -0.34
PDLIM7-202ENST00000355841 IGHV4-28A0A0C4DH34 117 aa12.92□□□□□ -0.34
PDLIM7-202ENST00000355841 SERTM2A0A1B0GWG4 89 aa12.92□□□□□ -0.34
PDLIM7-202ENST00000355841 SCO2A0A1W2PP80 73 aa12.92□□□□□ -0.34
PDLIM7-202ENST00000355841 F6UZH7 168 aa12.92□□□□□ -0.34
PDLIM7-202ENST00000355841 Q8NAQ8 132 aa12.92□□□□□ -0.34
PDLIM7-202ENST00000355841 HIST1H2BAQ96A08 127 aa12.92□□□□□ -0.34
PDLIM7-202ENST00000355841 LINC01587Q99440 93 aa12.92□□□□□ -0.34
PDLIM7-202ENST00000355841 C7orf71A4D174 169 aa12.91□□□□□ -0.34
PDLIM7-202ENST00000355841 ZNF705GA8MUZ8 300 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-202ENST00000355841 TMEM75Q8N9X5 138 aa12.91□□□□□ -0.34
PDLIM7-202ENST00000355841 BCL2P10415 239 aa12.9□□□□□ -0.34
PDLIM7-202ENST00000355841 C8orf49Q96NF6 230 aa12.9□□□□□ -0.34
PDLIM7-202ENST00000355841 EDA2RQ9HAV5 297 aa12.9□□□□□ -0.34
PDLIM7-202ENST00000355841 IFNA1P01562 189 aa12.89□□□□□ -0.35
PDLIM7-202ENST00000355841 EMP1P54849 157 aa12.89□□□□□ -0.35
PDLIM7-202ENST00000355841 SRSF3P84103 164 aaKnown RBP12.89□□□□□ -0.35
PDLIM7-202ENST00000355841 TRBV7-9A0A0J9YWB2 115 aa12.89□□□□□ -0.35
PDLIM7-202ENST00000355841 ZNF324O75467 553 aaPredicted RBP12.89□□□□□ -0.35
PDLIM7-202ENST00000355841 MIFP14174 115 aa12.89□□□□□ -0.35
PDLIM7-202ENST00000355841 AZU1P20160 251 aa12.89□□□□□ -0.35
PDLIM7-202ENST00000355841 TCEAL7Q9BRU2 100 aa12.89□□□□□ -0.35
PDLIM7-202ENST00000355841 NIPSNAP3BQ9BS92 247 aa12.89□□□□□ -0.35
PDLIM7-202ENST00000355841 LENEPQ9Y5L5 61 aa12.89□□□□□ -0.35
PDLIM7-202ENST00000355841 AKR1C3P42330 323 aa12.88□□□□□ -0.35
PDLIM7-202ENST00000355841 MEF2BQ02080 365 aaPredicted RBP12.88□□□□□ -0.35
PDLIM7-202ENST00000355841 PMS2P11Q13670 270 aa12.88□□□□□ -0.35
PDLIM7-202ENST00000355841 Q86TA4 180 aa12.88□□□□□ -0.35
PDLIM7-202ENST00000355841 C2CD4CQ8TF44 421 aa12.88□□□□□ -0.35
PDLIM7-202ENST00000355841 LOC102723971A0A1B0GUV8 181 aa12.87□□□□□ -0.35
PDLIM7-202ENST00000355841 SFTA3P0C7M3 94 aa12.87□□□□□ -0.35
PDLIM7-202ENST00000355841 RRN3P1Q2M238 152 aa12.87□□□□□ -0.35
PDLIM7-202ENST00000355841 TMEM256Q8N2U0 113 aa12.87□□□□□ -0.35
PDLIM7-202ENST00000355841 NEU1Q99519 415 aa12.87□□□□□ -0.35
PDLIM7-202ENST00000355841 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
PDLIM7-202ENST00000355841 VAX2Q9UIW0 290 aa12.87□□□□□ -0.35
PDLIM7-202ENST00000355841 H7BYZ3 331 aa12.86□□□□□ -0.35
PDLIM7-202ENST00000355841 UBE2G1P62253 170 aa12.86□□□□□ -0.35
PDLIM7-202ENST00000355841 C20orf144Q9BQM9 153 aa12.86□□□□□ -0.35
PDLIM7-202ENST00000355841 DERL1Q9BUN8 251 aa12.86□□□□□ -0.35
PDLIM7-202ENST00000355841 KLF12Q9Y4X4 402 aa12.86□□□□□ -0.35
PDLIM7-202ENST00000355841 RBFOX3A6NFN3 312 aa12.86□□□□□ -0.35
PDLIM7-202ENST00000355841 SMIM9A6NGZ8 99 aa12.86□□□□□ -0.35
PDLIM7-202ENST00000355841 ZNF80P51504 273 aaPredicted RBP12.86□□□□□ -0.35
PDLIM7-202ENST00000355841 TAS2R60P59551 318 aa12.86□□□□□ -0.35
PDLIM7-202ENST00000355841 TMEM183BQ1AE95 376 aa12.86□□□□□ -0.35
PDLIM7-202ENST00000355841 MUC21Q5SSG8 566 aa12.86□□□□□ -0.35
PDLIM7-202ENST00000355841 FMC1Q96HJ9 113 aa12.86□□□□□ -0.35
PDLIM7-202ENST00000355841 PEA15Q15121 130 aa12.85□□□□□ -0.35
PDLIM7-202ENST00000355841 NHLRC2Q8NBF2 726 aa12.85□□□□□ -0.35
PDLIM7-202ENST00000355841 C11orf68Q9H3H3 251 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-202ENST00000355841 FBLL1A6NHQ2 334 aaKnown RBP12.84□□□□□ -0.35
PDLIM7-202ENST00000355841 GCGP01275 180 aa12.84□□□□□ -0.35
PDLIM7-202ENST00000355841 SAPCD1Q5SSQ6 148 aa12.84□□□□□ -0.35
PDLIM7-202ENST00000355841 TMEM88Q6PEY1 159 aa12.84□□□□□ -0.35
PDLIM7-202ENST00000355841 CBLN2Q8IUK8 224 aa12.84□□□□□ -0.35
PDLIM7-202ENST00000355841 C11orf52Q96A22 123 aa12.84□□□□□ -0.35
PDLIM7-202ENST00000355841 WWC2-AS2Q96NR7 200 aa12.84□□□□□ -0.35
PDLIM7-202ENST00000355841 TXNDC17Q9BRA2 123 aa12.84□□□□□ -0.35
PDLIM7-202ENST00000355841 TP53TG3Q9ULZ0 132 aa12.84□□□□□ -0.35
PDLIM7-202ENST00000355841 RPL35P42766 123 aaKnown RBP12.83□□□□□ -0.35
PDLIM7-202ENST00000355841 Q6AWC8 147 aa12.83□□□□□ -0.35
PDLIM7-202ENST00000355841 PYGO2Q9BRQ0 406 aa12.83□□□□□ -0.35
PDLIM7-202ENST00000355841 EIF5A2Q9GZV4 153 aaKnown RBP12.83□□□□□ -0.35
PDLIM7-202ENST00000355841 SMCO4Q9NRQ5 59 aa12.83□□□□□ -0.35
PDLIM7-202ENST00000355841 NAGKQ9UJ70 344 aa12.83□□□□□ -0.35
PDLIM7-202ENST00000355841 CELA1Q9UNI1 258 aa12.83□□□□□ -0.35
PDLIM7-202ENST00000355841 PDE6DO43924 150 aa12.83□□□□□ -0.36
PDLIM7-202ENST00000355841 LTAP01374 205 aa12.83□□□□□ -0.36
PDLIM7-202ENST00000355841 ZNF506Q5JVG8 444 aa12.83□□□□□ -0.36
PDLIM7-202ENST00000355841 SMDT1Q9H4I9 107 aa12.83□□□□□ -0.36
PDLIM7-202ENST00000355841 DNAH7Q8WXX0 4024 aa12.82□□□□□ -0.36
PDLIM7-202ENST00000355841 CBY3A6NI87 242 aa12.82□□□□□ -0.36
PDLIM7-202ENST00000355841 TAGLN2P37802 199 aaKnown RBP12.82□□□□□ -0.36
PDLIM7-202ENST00000355841 C15orf54Q8N8G6 183 aa12.82□□□□□ -0.36
PDLIM7-202ENST00000355841 ZC2HC1AQ96GY0 325 aa12.82□□□□□ -0.36
PDLIM7-202ENST00000355841 IGHV1OR15-1A0A075B7D0 117 aa12.81□□□□□ -0.36
PDLIM7-202ENST00000355841 TRAV21A0A0B4J279 112 aa12.81□□□□□ -0.36
PDLIM7-202ENST00000355841 PLAC8L1A1L4L8 177 aa12.81□□□□□ -0.36
PDLIM7-202ENST00000355841 NANOS2P60321 138 aaKnown RBP12.81□□□□□ -0.36
PDLIM7-202ENST00000355841 IL17DQ8TAD2 202 aa12.81□□□□□ -0.36
PDLIM7-202ENST00000355841 RNASE8Q8TDE3 154 aaKnown RBP12.81□□□□□ -0.36
PDLIM7-202ENST00000355841 BIN3Q9NQY0 253 aa12.81□□□□□ -0.36
PDLIM7-202ENST00000355841 C11orf21Q9P2W6 132 aa12.81□□□□□ -0.36
PDLIM7-202ENST00000355841 ZFP30Q9Y2G7 519 aa12.81□□□□□ -0.36
PDLIM7-202ENST00000355841 TRBV6-1A0A0K0K1D8 114 aa12.8□□□□□ -0.36
PDLIM7-202ENST00000355841 BAGE2Q86Y30 109 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms