RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ZC2HC1AQ96GY0 325 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 SLX1AQ9BQ83 275 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 TRAV25A0A0B4J276 109 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 A0A1B0GUS0 222 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 IGHV2-70P01814 119 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 VOPP1Q96AW1 172 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 H3BMM0 161 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 ZNF726P1Q15940 193 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 DEFB113Q30KQ7 82 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 NOP10Q9NPE3 64 aaKnown RBP14.26□□□□□ -0.13
COL18A1-202ENST00000355480 NDUFA12Q9UI09 145 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 C9JQL5 133 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 CD5LO43866 347 aa14.25□□□□□ -0.13
COL18A1-202ENST00000355480 TCF15Q12870 199 aa14.25□□□□□ -0.13
COL18A1-202ENST00000355480 FOXI2Q6ZQN5 318 aa14.25□□□□□ -0.13
COL18A1-202ENST00000355480 ZSWIM8A7E2V4 1837 aa14.25□□□□□ -0.13
COL18A1-202ENST00000355480 DEFB136Q30KP8 78 aa14.25□□□□□ -0.13
COL18A1-202ENST00000355480 SCRT2Q9NQ03 307 aa14.25□□□□□ -0.13
COL18A1-202ENST00000355480 SLAQ13239 276 aa14.25□□□□□ -0.13
COL18A1-202ENST00000355480 PRB1P04280 392 aa14.25□□□□□ -0.13
COL18A1-202ENST00000355480 MRPL53Q96EL3 112 aaKnown RBP14.25□□□□□ -0.13
COL18A1-202ENST00000355480 LHBP01229 141 aa14.25□□□□□ -0.13
COL18A1-202ENST00000355480 CTSZQ9UBR2 303 aa14.25□□□□□ -0.13
COL18A1-202ENST00000355480 ZNF664Q8N3J9 261 aa14.24□□□□□ -0.13
COL18A1-202ENST00000355480 IGHV1-24A0A0C4DH33 117 aa14.24□□□□□ -0.13
COL18A1-202ENST00000355480 F6UB75 175 aa14.24□□□□□ -0.13
COL18A1-202ENST00000355480 WT1P19544 449 aaPredicted RBP14.24□□□□□ -0.13
COL18A1-202ENST00000355480 FAM231DQ6ZW35 169 aa14.24□□□□□ -0.13
COL18A1-202ENST00000355480 PTPRDP23468 1912 aa14.24□□□□□ -0.13
COL18A1-202ENST00000355480 IGKV2D-24A0A075B6R9 120 aa14.24□□□□□ -0.13
COL18A1-202ENST00000355480 IGKV1OR2-108A0A075B7D4 117 aa14.24□□□□□ -0.13
COL18A1-202ENST00000355480 A8MWP6 167 aa14.24□□□□□ -0.13
COL18A1-202ENST00000355480 FXYD5Q96DB9 178 aa14.24□□□□□ -0.13
COL18A1-202ENST00000355480 V9GYV3 84 aa14.24□□□□□ -0.13
COL18A1-202ENST00000355480 RHOHQ15669 191 aa14.23□□□□□ -0.13
COL18A1-202ENST00000355480 ZNF491Q8N8L2 437 aa14.23□□□□□ -0.13
COL18A1-202ENST00000355480 ARTNQ5T4W7 220 aa14.23□□□□□ -0.13
COL18A1-202ENST00000355480 SMIM2Q9BVW6 85 aa14.23□□□□□ -0.13
COL18A1-202ENST00000355480 DLEU1O43261 78 aa14.23□□□□□ -0.13
COL18A1-202ENST00000355480 ADAMTSL5Q6ZMM2 481 aa14.23□□□□□ -0.13
COL18A1-202ENST00000355480 RNASE13Q5GAN3 156 aaKnown RBP14.23□□□□□ -0.13
COL18A1-202ENST00000355480 HERVK_113P63121 156 aa14.22□□□□□ -0.13
COL18A1-202ENST00000355480 IGHV4-61A0A0C4DH41 118 aa14.22□□□□□ -0.13
COL18A1-202ENST00000355480 NPYP01303 97 aa14.22□□□□□ -0.13
COL18A1-202ENST00000355480 SMIM27A0A1W2PRY6 76 aa14.22□□□□□ -0.13
COL18A1-202ENST00000355480 TAL2Q16559 108 aa14.22□□□□□ -0.13
COL18A1-202ENST00000355480 SIGLEC8Q9NYZ4 499 aa14.22□□□□□ -0.13
COL18A1-202ENST00000355480 U3KQE9 123 aa14.22□□□□□ -0.13
COL18A1-202ENST00000355480 HLA-DMBP28068 263 aa14.21□□□□□ -0.13
COL18A1-202ENST00000355480 SRSF2Q01130 221 aaKnown RBP14.21□□□□□ -0.13
COL18A1-202ENST00000355480 SPINK8P0C7L1 97 aa14.21□□□□□ -0.13
COL18A1-202ENST00000355480 IGLV2-23P01705 113 aa14.21□□□□□ -0.14
COL18A1-202ENST00000355480 INAFM2P0DMQ5 153 aa14.21□□□□□ -0.14
COL18A1-202ENST00000355480 ASPHD1Q5U4P2 390 aa14.21□□□□□ -0.14
COL18A1-202ENST00000355480 UBE2WQ96B02 151 aa14.21□□□□□ -0.14
COL18A1-202ENST00000355480 CRLF1O75462 422 aa14.2□□□□□ -0.14
COL18A1-202ENST00000355480 UBE2V1Q13404 147 aa14.2□□□□□ -0.14
COL18A1-202ENST00000355480 IGHV4-30-2A0A087WSY4 118 aa14.2□□□□□ -0.14
COL18A1-202ENST00000355480 C17orf77Q96MU5 243 aa14.2□□□□□ -0.14
COL18A1-202ENST00000355480 MORN5Q5VZ52 161 aa14.2□□□□□ -0.14
COL18A1-202ENST00000355480 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.2□□□□□ -0.143e-8■■■□□ 15.4
COL18A1-202ENST00000355480 UBE2BP63146 152 aa14.2□□□□□ -0.14
COL18A1-202ENST00000355480 IGFBPL1Q8WX77 278 aa14.2□□□□□ -0.14
COL18A1-202ENST00000355480 GTSF1LQ9H1H1 148 aa14.2□□□□□ -0.14
COL18A1-202ENST00000355480 GNRH2O43555 120 aa14.2□□□□□ -0.14
COL18A1-202ENST00000355480 C8orf31Q8N9H6 132 aa14.2□□□□□ -0.14
COL18A1-202ENST00000355480 XCL1P47992 114 aa14.19□□□□□ -0.14
COL18A1-202ENST00000355480 Q9HAA7 133 aa14.19□□□□□ -0.14
COL18A1-202ENST00000355480 MRPL35Q9NZE8 188 aaKnown RBP14.19□□□□□ -0.14
COL18A1-202ENST00000355480 CENPVL3A0A0U1RRI6 287 aa14.19□□□□□ -0.14
COL18A1-202ENST00000355480 IGHV4-38-2P0DP08 117 aa14.19□□□□□ -0.14
COL18A1-202ENST00000355480 DYNAPQ8N1N2 210 aa14.19□□□□□ -0.14
COL18A1-202ENST00000355480 C9orf66Q5T8R8 295 aa14.19□□□□□ -0.14
COL18A1-202ENST00000355480 POLR3KQ9Y2Y1 108 aaPredicted RBP14.19□□□□□ -0.14
COL18A1-202ENST00000355480 POU2AF1Q16633 256 aa14.19□□□□□ -0.14
COL18A1-202ENST00000355480 IGLC7A0M8Q6 106 aa14.19□□□□□ -0.14
COL18A1-202ENST00000355480 Q6ZQT7 251 aa14.19□□□□□ -0.14
COL18A1-202ENST00000355480 KIAA1671Q9BY89 1806 aa14.18□□□□□ -0.14
COL18A1-202ENST00000355480 SLURP1P55000 103 aa14.18□□□□□ -0.14
COL18A1-202ENST00000355480 APRG1Q8IVJ8 170 aa14.18□□□□□ -0.14
COL18A1-202ENST00000355480 PYGO2Q9BRQ0 406 aa14.18□□□□□ -0.14
COL18A1-202ENST00000355480 C20orf78Q9BR46 151 aa14.18□□□□□ -0.14
COL18A1-202ENST00000355480 OR11H6Q8NGC7 330 aa14.17□□□□□ -0.14
COL18A1-202ENST00000355480 DKK4Q9UBT3 224 aa14.17□□□□□ -0.14
COL18A1-202ENST00000355480 FOXE3Q13461 319 aa14.17□□□□□ -0.14
COL18A1-202ENST00000355480 CREBBPQ92793 2442 aa14.17□□□□□ -0.14
COL18A1-202ENST00000355480 HAMPP81172 84 aa14.17□□□□□ -0.14
COL18A1-202ENST00000355480 RSPO3Q9BXY4 272 aaPredicted RBP14.17□□□□□ -0.14
COL18A1-202ENST00000355480 WDR81Q562E7 1941 aa14.17□□□□□ -0.14
COL18A1-202ENST00000355480 MRPL52Q86TS9 123 aaKnown RBP14.17□□□□□ -0.14
COL18A1-202ENST00000355480 PIFOQ8TCI5 191 aa14.17□□□□□ -0.14
COL18A1-202ENST00000355480 IGLV3-1P01715 115 aa14.17□□□□□ -0.14
COL18A1-202ENST00000355480 FGF6P10767 208 aa14.16□□□□□ -0.14
COL18A1-202ENST00000355480 AGPAT4-IT1Q9H0P7 198 aa14.16□□□□□ -0.14
COL18A1-202ENST00000355480 TRBV20-1A0A075B6N2 111 aa14.16□□□□□ -0.14
COL18A1-202ENST00000355480 C11orf53Q8IXP5 236 aa14.16□□□□□ -0.14
COL18A1-202ENST00000355480 UBL5Q9BZL1 73 aa14.16□□□□□ -0.14
COL18A1-202ENST00000355480 PCNX1Q96RV3 2341 aa14.16□□□□□ -0.14
COL18A1-202ENST00000355480 F8VRH5 84 aa14.16□□□□□ -0.14
COL18A1-202ENST00000355480 LGALS9BQ3B8N2 356 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms