RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 TAGLN2P37802 199 aaKnown RBP1.71□□□□□ -2.14
VPS54-202ENST00000354504 JOSD1Q15040 202 aaPredicted RBP1.71□□□□□ -2.14
VPS54-202ENST00000354504 MORN3Q6PF18 240 aaPredicted RBP1.71□□□□□ -2.14
VPS54-202ENST00000354504 MMD2Q8IY49 270 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 ZNF664Q8N3J9 261 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 MAPK1IP1LQ8NDC0 245 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 OR4F17Q8NGA8 305 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 OR4F4Q96R69 305 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 ALKBH7Q9BT30 221 aaPredicted RBP1.71□□□□□ -2.14
VPS54-202ENST00000354504 GNB1LQ9BYB4 327 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 COMMD5Q9GZQ3 224 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 ESM1Q9NQ30 184 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 DPM3Q9P2X0 92 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 EPDR1Q9UM22 224 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 MGAM2Q2M2H8 2515 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 DYNC1H1Q14204 4646 aaKnown RBP1.7□□□□□ -2.14
VPS54-202ENST00000354504 TRAV8-1A0A0A6YYK1 113 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 IGHV1-69DA0A0B4J2H0 117 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 A0A1W2PPV4 95 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 A0A1W2PS18 150 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 A8MWP6 167 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 G3V318 75 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 CLDN34H7C241 214 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 PEX7O00628 323 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 NPFFO15130 113 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 IGHV1-69P01742 117 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 SMIM6P0DI80 62 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 HIST1H1BP16401 226 aaKnown RBP1.7□□□□□ -2.14
VPS54-202ENST00000354504 IER3P46695 156 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 TAS2R60P59551 318 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 RTL8BQ17RB0 113 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 EBLN2Q6P2I7 272 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 AMTNQ6UX39 209 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 EXOC3-AS1Q8N2X6 119 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 C18orf32Q8TCD1 76 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 VN1R17PQ8TDU5 208 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 RPUSD4Q96CM3 377 aaKnown RBP1.7□□□□□ -2.14
VPS54-202ENST00000354504 C14orf144Q96I85 54 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 FAM210BQ96KR6 192 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 SGK494Q96LW2 274 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 TXN2Q99757 166 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 VGLL1Q99990 258 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 PBDC1Q9BVG4 233 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 PLEKHA3Q9HB20 300 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 ZNF331Q9NQX6 463 aaPredicted RBP1.7□□□□□ -2.14
VPS54-202ENST00000354504 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 STAB1Q9NY15 2570 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 H3BTX0 84 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 CYB5BO43169 146 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 SNAI2O43623 268 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 ZNF324O75467 553 aaPredicted RBP1.7□□□□□ -2.14
VPS54-202ENST00000354504 GIG44P09565 113 aaPredicted RBP1.7□□□□□ -2.14
VPS54-202ENST00000354504 FGF6P10767 208 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 RHOBP62745 196 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 LOXL1Q08397 574 aaPredicted RBP1.7□□□□□ -2.14
VPS54-202ENST00000354504 FAM78BQ5VT40 261 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 C18orf65Q6ZTR6 163 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 LINC00173Q6ZV60 143 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 ZFAND2AQ8N6M9 145 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 NHLRC2Q8NBF2 726 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 OR5AU1Q8NGC0 362 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 OR4F5Q8NH21 305 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 SMIM7Q9BQ49 75 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 SPXQ9BT56 116 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 GFRA4Q9GZZ7 299 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 OR51M1Q9H341 326 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 GNB4Q9HAV0 340 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 TP73-AS1Q9UF72 201 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 RPH3ALQ9UNE2 315 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 SELENOKQ9Y6D0 94 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 IZUMO1RA6ND01 250 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 RBMY1BA6NDE4 496 aaKnown RBP1.7□□□□□ -2.14
VPS54-202ENST00000354504 RBMY1EA6NEQ0 496 aaKnown RBP1.7□□□□□ -2.14
VPS54-202ENST00000354504 H7BYZ3 331 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 RBMY1DP0C7P1 496 aaKnown RBP1.7□□□□□ -2.14
VPS54-202ENST00000354504 RPL27AP46776 148 aaKnown RBP1.7□□□□□ -2.14
VPS54-202ENST00000354504 GALR1P47211 349 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 BLCAPP62952 87 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 RELQ04864 619 aaPredicted RBP1.7□□□□□ -2.14
VPS54-202ENST00000354504 PDE6HQ13956 83 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 PSG3Q16557 428 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 RASL11AQ6T310 242 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 TOMM20LQ6UXN7 152 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 IL17RELQ6ZVW7 336 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 LYPD1Q8N2G4 141 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 NECAP1Q8NC96 275 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 OR8B3Q8NGG8 313 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 VSTM2AQ8TAG5 236 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 RPEQ96AT9 228 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 TIMD4Q96H15 378 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 OR8B2Q96RD0 313 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 C12orf57Q99622 126 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 Q9H3A6 140 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 LINC00527Q9UJ94 153 aa1.7□□□□□ -2.14
VPS54-202ENST00000354504 IGHV3OR16-13A0A075B7E8 117 aa1.69□□□□□ -2.14
VPS54-202ENST00000354504 IGLV5-52A0A0A0MRZ9 124 aa1.69□□□□□ -2.14
VPS54-202ENST00000354504 IGHV3-74A0A0B4J1X5 117 aa1.69□□□□□ -2.14
VPS54-202ENST00000354504 RBAKDNA6NC62 111 aa1.69□□□□□ -2.14
VPS54-202ENST00000354504 KLLNB2CW77 178 aa1.69□□□□□ -2.14
VPS54-202ENST00000354504 C17orf112F2Z3M2 114 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms