RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 FAT3Q8TDW7 4589 aa10.76□□□□□ -0.69
DDX55-202ENST00000354291 KLLNB2CW77 178 aa10.75□□□□□ -0.69
DDX55-202ENST00000354291 H0YIZ8 118 aa10.75□□□□□ -0.69
DDX55-202ENST00000354291 NMBP08949 121 aa10.75□□□□□ -0.69
DDX55-202ENST00000354291 C9orf47Q6ZRZ4 202 aa10.75□□□□□ -0.69
DDX55-202ENST00000354291 MIR17HGQ75NE6 70 aa10.75□□□□□ -0.69
DDX55-202ENST00000354291 ZNF680Q8NEM1 530 aa10.75□□□□□ -0.69
DDX55-202ENST00000354291 FAM167A-AS1Q96KT0 104 aa10.75□□□□□ -0.69
DDX55-202ENST00000354291 FAM19A4Q96LR4 140 aa10.75□□□□□ -0.69
DDX55-202ENST00000354291 LINC00467Q9BRT7 94 aa10.75□□□□□ -0.69
DDX55-202ENST00000354291 MRPL32Q9BYC8 188 aaKnown RBP10.75□□□□□ -0.69
DDX55-202ENST00000354291 OR51M1Q9H341 326 aa10.75□□□□□ -0.69
DDX55-202ENST00000354291 FAM30AQ9NZY2 134 aa10.75□□□□□ -0.69
DDX55-202ENST00000354291 RNF213Q63HN8 5207 aa10.75□□□□□ -0.69
DDX55-202ENST00000354291 ZNF324O75467 553 aaPredicted RBP10.74□□□□□ -0.69
DDX55-202ENST00000354291 GPX1P07203 203 aa10.74□□□□□ -0.69
DDX55-202ENST00000354291 PET100P0DJ07 73 aa10.74□□□□□ -0.69
DDX55-202ENST00000354291 H2BFSP57053 126 aa10.74□□□□□ -0.69
DDX55-202ENST00000354291 DEFA1P59665 94 aa10.74□□□□□ -0.69
DDX55-202ENST00000354291 DEFA3P59666 94 aa10.74□□□□□ -0.69
DDX55-202ENST00000354291 TMEM78Q5T7P6 136 aa10.74□□□□□ -0.69
DDX55-202ENST00000354291 PPP1R1CQ8WVI7 109 aa10.74□□□□□ -0.69
DDX55-202ENST00000354291 VSIG2Q96IQ7 327 aa10.74□□□□□ -0.69
DDX55-202ENST00000354291 TMPRSS5Q9H3S3 457 aa10.74□□□□□ -0.69
DDX55-202ENST00000354291 TRAV9-2A0A087WT02 112 aa10.73□□□□□ -0.69
DDX55-202ENST00000354291 CRISP2P16562 243 aa10.73□□□□□ -0.69
DDX55-202ENST00000354291 RNASE4P34096 147 aaKnown RBP10.73□□□□□ -0.69
DDX55-202ENST00000354291 ANXA2RQ3ZCQ2 193 aa10.73□□□□□ -0.69
DDX55-202ENST00000354291 FAM122CQ6P4D5 195 aa10.73□□□□□ -0.69
DDX55-202ENST00000354291 EIF4E3Q8N5X7 224 aaKnown RBP10.73□□□□□ -0.69
DDX55-202ENST00000354291 ATP5SQ99766 215 aa10.73□□□□□ -0.69
DDX55-202ENST00000354291 PAXXQ9BUH6 204 aa10.73□□□□□ -0.69
DDX55-202ENST00000354291 FUT9Q9Y231 359 aa10.73□□□□□ -0.69
DDX55-202ENST00000354291 SSNA1O43805 119 aa10.72□□□□□ -0.69
DDX55-202ENST00000354291 MPC2O95563 127 aa10.72□□□□□ -0.69
DDX55-202ENST00000354291 CD300CQ08708 224 aa10.72□□□□□ -0.69
DDX55-202ENST00000354291 Q6ZTI0 123 aa10.72□□□□□ -0.69
DDX55-202ENST00000354291 LINC00528Q8N1L1 170 aa10.72□□□□□ -0.69
DDX55-202ENST00000354291 TRGV2A0A075B6R0 118 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 IGKV2-40A0A087WW87 121 aaPredicted RBP10.71□□□□□ -0.69
DDX55-202ENST00000354291 TRBV7-9A0A0J9YWB2 115 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 OR7C2O60412 319 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 IGKV2D-40P01614 121 aaPredicted RBP10.71□□□□□ -0.69
DDX55-202ENST00000354291 OR10J4P0C629 311 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 CSN1S1P47710 185 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 BTN1A1Q13410 526 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 C11orf72Q8NBR9 251 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 SCGB1C1Q8TD33 95 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 FXYD5Q96DB9 178 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 VGLL1Q99990 258 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 GSN-AS1Q9NRJ2 163 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 MSRB1Q9NZV6 116 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 ZNF492Q9P255 531 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 HSPB11Q9Y547 144 aa10.71□□□□□ -0.69
DDX55-202ENST00000354291 RGS13O14921 159 aa10.7□□□□□ -0.7
DDX55-202ENST00000354291 ZNF138P52744 262 aa10.7□□□□□ -0.7
DDX55-202ENST00000354291 IBA57Q5T440 356 aaKnown RBP10.7□□□□□ -0.7
DDX55-202ENST00000354291 ZFAND2AQ8N6M9 145 aa10.7□□□□□ -0.7
DDX55-202ENST00000354291 TRGV1A0A0A0MS02 117 aa10.69□□□□□ -0.7
DDX55-202ENST00000354291 RBAKDNA6NC62 111 aa10.69□□□□□ -0.7
DDX55-202ENST00000354291 RPL12P30050 165 aaKnown RBP10.69□□□□□ -0.7
DDX55-202ENST00000354291 TCL1AP56279 114 aa10.69□□□□□ -0.7
DDX55-202ENST00000354291 TAS2R45P59539 299 aa10.69□□□□□ -0.7
DDX55-202ENST00000354291 RANP62826 216 aaKnown RBP10.69□□□□□ -0.7
DDX55-202ENST00000354291 FFAR4Q5NUL3 377 aa10.69□□□□□ -0.7
DDX55-202ENST00000354291 LY96Q9Y6Y9 160 aa10.69□□□□□ -0.7
DDX55-202ENST00000354291 IGHV1OR15-1A0A075B7D0 117 aa10.68□□□□□ -0.7
DDX55-202ENST00000354291 KHDC3LQ587J8 217 aa10.68□□□□□ -0.7
DDX55-202ENST00000354291 PHYHIPLQ96FC7 376 aa10.68□□□□□ -0.7
DDX55-202ENST00000354291 KLF12Q9Y4X4 402 aa10.68□□□□□ -0.7
DDX55-202ENST00000354291 ICOSQ9Y6W8 199 aa10.68□□□□□ -0.7
DDX55-202ENST00000354291 SPINK4O60575 86 aa10.67□□□□□ -0.7
DDX55-202ENST00000354291 OXTP01178 125 aa10.67□□□□□ -0.7
DDX55-202ENST00000354291 UBE2L3P68036 154 aaKnown RBP10.67□□□□□ -0.7
DDX55-202ENST00000354291 LYPD5Q6UWN5 251 aa10.67□□□□□ -0.7
DDX55-202ENST00000354291 NTN5Q8WTR8 489 aaPredicted RBP10.67□□□□□ -0.7
DDX55-202ENST00000354291 ARPC5LQ9BPX5 153 aa10.67□□□□□ -0.7
DDX55-202ENST00000354291 PAX4O43316 350 aa10.66□□□□□ -0.7
DDX55-202ENST00000354291 PSCAO43653 123 aa10.66□□□□□ -0.7
DDX55-202ENST00000354291 PRR9Q5T870 116 aa10.66□□□□□ -0.7
DDX55-202ENST00000354291 SMIM3Q9BZL3 60 aa10.66□□□□□ -0.7
DDX55-202ENST00000354291 MBD2Q9UBB5 411 aa10.66□□□□□ -0.7
DDX55-202ENST00000354291 TP53TG3Q9ULZ0 132 aa10.66□□□□□ -0.7
DDX55-202ENST00000354291 LENEPQ9Y5L5 61 aa10.66□□□□□ -0.7
DDX55-202ENST00000354291 EVI2AP22794 236 aa10.65□□□□□ -0.7
DDX55-202ENST00000354291 SLAQ13239 276 aa10.65□□□□□ -0.7
DDX55-202ENST00000354291 ZNF266Q14584 549 aa10.65□□□□□ -0.7
DDX55-202ENST00000354291 Q8TAT8 98 aa10.65□□□□□ -0.7
DDX55-202ENST00000354291 ST6GAL2Q96JF0 529 aa10.65□□□□□ -0.7
DDX55-202ENST00000354291 BATF3Q9NR55 127 aa10.65□□□□□ -0.7
DDX55-202ENST00000354291 A0A1W2PPV4 95 aa10.64□□□□□ -0.71
DDX55-202ENST00000354291 DIRC3C9JPN6 131 aa10.64□□□□□ -0.71
DDX55-202ENST00000354291 ZNF415Q09FC8 603 aa10.64□□□□□ -0.71
DDX55-202ENST00000354291 ACOT6Q3I5F7 207 aaPredicted RBP10.64□□□□□ -0.71
DDX55-202ENST00000354291 FAM74A1Q5RGS3 127 aa10.64□□□□□ -0.71
DDX55-202ENST00000354291 PQLC2Q6ZP29 291 aa10.64□□□□□ -0.71
DDX55-202ENST00000354291 Q6ZQT7 251 aa10.64□□□□□ -0.71
DDX55-202ENST00000354291 LRCOL1A6NCL2 159 aa10.63□□□□□ -0.71
DDX55-202ENST00000354291 Q6AWC8 147 aa10.63□□□□□ -0.71
DDX55-202ENST00000354291 ARL6IP6Q8N6S5 226 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms