RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 DLX1P56177 255 aa12.65□□□□□ -0.38
MBD1-204ENST00000347968 MRPL23Q16540 153 aaKnown RBP12.65□□□□□ -0.38
MBD1-204ENST00000347968 TMEM155Q4W5P6 130 aa12.65□□□□□ -0.38
MBD1-204ENST00000347968 CHCHD5Q9BSY4 110 aa12.65□□□□□ -0.38
MBD1-204ENST00000347968 SIGLEC15Q6ZMC9 328 aa12.65□□□□□ -0.38
MBD1-204ENST00000347968 TRGV9Q99603 122 aa12.65□□□□□ -0.38
MBD1-204ENST00000347968 MUC6Q6W4X9 2439 aa12.65□□□□□ -0.38
MBD1-204ENST00000347968 TRBV19A0A075B6N1 114 aa12.65□□□□□ -0.38
MBD1-204ENST00000347968 NTN5Q8WTR8 489 aaPredicted RBP12.65□□□□□ -0.38
MBD1-204ENST00000347968 RASL11BQ9BPW5 248 aa12.65□□□□□ -0.38
MBD1-204ENST00000347968 LOC107984640A0A0U1RRK4 108 aa12.64□□□□□ -0.39
MBD1-204ENST00000347968 SLC25A16P16260 332 aa12.64□□□□□ -0.39
MBD1-204ENST00000347968 CNTFRP26992 372 aa12.64□□□□□ -0.39
MBD1-204ENST00000347968 OR11H6Q8NGC7 330 aa12.64□□□□□ -0.39
MBD1-204ENST00000347968 SHISA9B4DS77 424 aa12.64□□□□□ -0.39
MBD1-204ENST00000347968 TRGV3P03979 118 aa12.64□□□□□ -0.39
MBD1-204ENST00000347968 HOXB4P17483 251 aaPredicted RBP12.64□□□□□ -0.39
MBD1-204ENST00000347968 PRADC1Q9BSG0 188 aa12.64□□□□□ -0.39
MBD1-204ENST00000347968 SPRY2O43597 315 aa12.63□□□□□ -0.39
MBD1-204ENST00000347968 CECR9P0C854 216 aa12.63□□□□□ -0.39
MBD1-204ENST00000347968 C15orf53Q8NAA6 179 aa12.63□□□□□ -0.39
MBD1-204ENST00000347968 NGBQ9NPG2 151 aa12.63□□□□□ -0.39
MBD1-204ENST00000347968 AKAP13Q12802 2813 aa12.63□□□□□ -0.39
MBD1-204ENST00000347968 ATP5IP56385 69 aaPredicted RBP12.63□□□□□ -0.39
MBD1-204ENST00000347968 UBE2D3P61077 147 aa12.63□□□□□ -0.39
MBD1-204ENST00000347968 UBE2D2P62837 147 aa12.63□□□□□ -0.39
MBD1-204ENST00000347968 IGHV3OR16-8A0A075B7F1 116 aa12.63□□□□□ -0.39
MBD1-204ENST00000347968 SLC25A20O43772 301 aa12.63□□□□□ -0.39
MBD1-204ENST00000347968 HLA-DMBP28068 263 aa12.63□□□□□ -0.39
MBD1-204ENST00000347968 BEX4Q9NWD9 120 aaPredicted RBP12.62□□□□□ -0.39
MBD1-204ENST00000347968 TEX49A0A1B0GTD5 131 aa12.62□□□□□ -0.39
MBD1-204ENST00000347968 TMEM262E9PQX1 116 aa12.62□□□□□ -0.39
MBD1-204ENST00000347968 NXT2Q9NPJ8 142 aaKnown RBP12.62□□□□□ -0.39
MBD1-204ENST00000347968 DTX2Q86UW9 622 aa12.61□□□□□ -0.39
MBD1-204ENST00000347968 NDUFA11Q86Y39 141 aa12.6□□□□□ -0.39
MBD1-204ENST00000347968 TMEM167AQ8TBQ9 72 aa12.6□□□□□ -0.39
MBD1-204ENST00000347968 GVINP1Q7Z2Y8 2422 aa12.6□□□□□ -0.39
MBD1-204ENST00000347968 FCN3O75636 299 aa12.6□□□□□ -0.39
MBD1-204ENST00000347968 UBE2D1P51668 147 aa12.6□□□□□ -0.39
MBD1-204ENST00000347968 Q6ZS46 218 aa12.6□□□□□ -0.39
MBD1-204ENST00000347968 CENPVL3A0A0U1RRI6 287 aa12.59□□□□□ -0.39
MBD1-204ENST00000347968 WT1P19544 449 aaPredicted RBP12.59□□□□□ -0.39
MBD1-204ENST00000347968 IGHV4-39P01824 125 aa12.59□□□□□ -0.39
MBD1-204ENST00000347968 TCF15Q12870 199 aa12.59□□□□□ -0.39
MBD1-204ENST00000347968 PIP4P1Q86T03 277 aa12.59□□□□□ -0.39
MBD1-204ENST00000347968 Q8N1Y9 231 aa12.59□□□□□ -0.39
MBD1-204ENST00000347968 CUL9Q8IWT3 2517 aa12.59□□□□□ -0.39
MBD1-204ENST00000347968 CD7P09564 240 aa12.58□□□□□ -0.39
MBD1-204ENST00000347968 Q6ZS92 163 aa12.58□□□□□ -0.39
MBD1-204ENST00000347968 RASL10AQ92737 203 aa12.58□□□□□ -0.39
MBD1-204ENST00000347968 ELANEP08246 267 aa12.58□□□□□ -0.4
MBD1-204ENST00000347968 OR4C13Q8NGP0 309 aa12.58□□□□□ -0.4
MBD1-204ENST00000347968 ODF3Q96PU9 254 aa12.58□□□□□ -0.4
MBD1-204ENST00000347968 IGLV2-23P01705 113 aa12.58□□□□□ -0.4
MBD1-204ENST00000347968 LAGE3Q14657 143 aa12.58□□□□□ -0.4
MBD1-204ENST00000347968 PRR25Q96S07 402 aa12.58□□□□□ -0.4
MBD1-204ENST00000347968 F8VRH5 84 aa12.57□□□□□ -0.4
MBD1-204ENST00000347968 ZNF575Q86XF7 245 aa12.57□□□□□ -0.4
MBD1-204ENST00000347968 Q8N8P6 123 aa12.57□□□□□ -0.4
MBD1-204ENST00000347968 SCNM1Q9BWG6 230 aa12.57□□□□□ -0.4
MBD1-204ENST00000347968 SPRR3Q9UBC9 169 aa12.57□□□□□ -0.4
MBD1-204ENST00000347968 CFC1BP0CG36 223 aa12.57□□□□□ -0.4
MBD1-204ENST00000347968 CFC1P0CG37 223 aa12.57□□□□□ -0.4
MBD1-204ENST00000347968 LINC00694P0DN24 101 aa12.57□□□□□ -0.4
MBD1-204ENST00000347968 PLNP26678 52 aa12.57□□□□□ -0.4
MBD1-204ENST00000347968 KLK5Q9Y337 293 aaPredicted RBP12.57□□□□□ -0.4
MBD1-204ENST00000347968 CACNA1GO43497 2377 aa12.57□□□□□ -0.4
MBD1-204ENST00000347968 IGKV1-17P01599 117 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 CCL11P51671 97 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 PRSS33Q8NF86 280 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 IGLV2-18A0A075B6J9 118 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 J3KRW8 73 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 ERCC8Q13216 396 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 VCX2Q9H322 139 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 C21orf62Q9NYP8 219 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 ARHGAP32A7KAX9 2087 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 ATMQ13315 3056 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 IGHV3-35A0A0C4DH35 117 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 H7C1H1 209 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 GLRXP35754 106 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 ZNF833PQ6ZTB9 187 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 IGFBPL1Q8WX77 278 aa12.56□□□□□ -0.4
MBD1-204ENST00000347968 RPL7P18124 248 aaKnown RBP12.55□□□□□ -0.4
MBD1-204ENST00000347968 RPL27AP46776 148 aaKnown RBP12.55□□□□□ -0.4
MBD1-204ENST00000347968 PSMG4Q5JS54 123 aa12.55□□□□□ -0.4
MBD1-204ENST00000347968 SCGB3A1Q96QR1 104 aa12.55□□□□□ -0.4
MBD1-204ENST00000347968 MALRD1Q5VYJ5 2156 aa12.55□□□□□ -0.4
MBD1-204ENST00000347968 IGLC6P0CF74 106 aa12.55□□□□□ -0.4
MBD1-204ENST00000347968 FOXC1Q12948 553 aa12.55□□□□□ -0.4
MBD1-204ENST00000347968 GAFA1Q96PS6 74 aa12.55□□□□□ -0.4
MBD1-204ENST00000347968 CSDC2Q9Y534 153 aaKnown RBP12.55□□□□□ -0.4
MBD1-204ENST00000347968 ADGRG4Q8IZF6 3080 aa12.55□□□□□ -0.4
MBD1-204ENST00000347968 TRAV8-4A0A0B4J246 113 aa12.54□□□□□ -0.4
MBD1-204ENST00000347968 MRGPRG-AS1Q2M3A8 158 aa12.54□□□□□ -0.4
MBD1-204ENST00000347968 FAM57AQ8TBR7 257 aa12.54□□□□□ -0.4
MBD1-204ENST00000347968 RAI1Q7Z5J4 1906 aaPredicted RBP12.54□□□□□ -0.4
MBD1-204ENST00000347968 TMEM14CQ9P0S9 112 aa12.54□□□□□ -0.4
MBD1-204ENST00000347968 SHANK2-AS3Q9BTD1 123 aa12.53□□□□□ -0.4
MBD1-204ENST00000347968 RAB1BQ9H0U4 201 aa12.53□□□□□ -0.4
MBD1-204ENST00000347968 OOSP1A8MZH6 123 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms