RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 APRG1Q8IVJ8 170 aa8.18□□□□□ -1.1
ECM1-201ENST00000346569 ZFAND2AQ8N6M9 145 aa8.18□□□□□ -1.1
ECM1-201ENST00000346569 TSKUQ8WUA8 353 aa8.18□□□□□ -1.1
ECM1-201ENST00000346569 SPAG8Q99932 426 aaPredicted RBP8.18□□□□□ -1.1
ECM1-201ENST00000346569 RPP21Q9H633 154 aaKnown RBP8.18□□□□□ -1.1
ECM1-201ENST00000346569 A0A1W2PPQ1 181 aa8.17□□□□□ -1.1
ECM1-201ENST00000346569 FAM231BA6NCW3 169 aa8.17□□□□□ -1.1
ECM1-201ENST00000346569 A8MTW9 85 aa8.17□□□□□ -1.1
ECM1-201ENST00000346569 SH2D1AO60880 128 aa8.17□□□□□ -1.1
ECM1-201ENST00000346569 CRISP2P16562 243 aa8.17□□□□□ -1.1
ECM1-201ENST00000346569 HIST1H1AQ02539 215 aaPredicted RBP8.17□□□□□ -1.1
ECM1-201ENST00000346569 FAM162BQ5T6X4 162 aa8.17□□□□□ -1.1
ECM1-201ENST00000346569 OR4C46A6NHA9 309 aa8.16□□□□□ -1.1
ECM1-201ENST00000346569 PF4P02776 101 aa8.16□□□□□ -1.1
ECM1-201ENST00000346569 CD33P20138 364 aa8.16□□□□□ -1.1
ECM1-201ENST00000346569 DEFB131AP59861 70 aa8.16□□□□□ -1.1
ECM1-201ENST00000346569 FOXI2Q6ZQN5 318 aa8.16□□□□□ -1.1
ECM1-201ENST00000346569 NUP35Q8NFH5 326 aa8.16□□□□□ -1.1
ECM1-201ENST00000346569 OR2D3Q8NGH3 330 aa8.16□□□□□ -1.1
ECM1-201ENST00000346569 OR2K2Q8NGT1 345 aa8.16□□□□□ -1.1
ECM1-201ENST00000346569 BTF3L4Q96K17 158 aa8.16□□□□□ -1.1
ECM1-201ENST00000346569 GFRA4Q9GZZ7 299 aa8.16□□□□□ -1.1
ECM1-201ENST00000346569 SAV1Q9H4B6 383 aaPredicted RBP8.16□□□□□ -1.1
ECM1-201ENST00000346569 SRD5A3Q9H8P0 318 aa8.16□□□□□ -1.1
ECM1-201ENST00000346569 SAP30O75446 220 aa8.15□□□□□ -1.1
ECM1-201ENST00000346569 DUSP14O95147 198 aaKnown RBP8.15□□□□□ -1.1
ECM1-201ENST00000346569 RPL19P84098 196 aaKnown RBP8.15□□□□□ -1.1
ECM1-201ENST00000346569 PRR9Q5T870 116 aa8.15□□□□□ -1.1
ECM1-201ENST00000346569 EBLN2Q6P2I7 272 aa8.15□□□□□ -1.1
ECM1-201ENST00000346569 WFDC9Q8NEX5 89 aa8.15□□□□□ -1.1
ECM1-201ENST00000346569 GTSF1Q8WW33 167 aa8.15□□□□□ -1.1
ECM1-201ENST00000346569 TMEM158Q8WZ71 300 aa8.15□□□□□ -1.1
ECM1-201ENST00000346569 ODF3Q96PU9 254 aa8.15□□□□□ -1.1
ECM1-201ENST00000346569 NEU1Q99519 415 aa8.15□□□□□ -1.1
ECM1-201ENST00000346569 C11orf21Q9P2W6 132 aa8.15□□□□□ -1.1
ECM1-201ENST00000346569 TMEM189A5PLL7 270 aa8.14□□□□□ -1.11
ECM1-201ENST00000346569 KLLNB2CW77 178 aa8.14□□□□□ -1.11
ECM1-201ENST00000346569 PHOX2AO14813 284 aa8.14□□□□□ -1.11
ECM1-201ENST00000346569 FRMD6-AS1P0C7T7 363 aa8.14□□□□□ -1.11
ECM1-201ENST00000346569 RPS10P46783 165 aaKnown RBP8.14□□□□□ -1.11
ECM1-201ENST00000346569 TCL1AP56279 114 aa8.14□□□□□ -1.11
ECM1-201ENST00000346569 BEAN1Q3B7T3 259 aa8.14□□□□□ -1.11
ECM1-201ENST00000346569 AMTNQ6UX39 209 aa8.14□□□□□ -1.11
ECM1-201ENST00000346569 Q6ZQT7 251 aa8.14□□□□□ -1.11
ECM1-201ENST00000346569 ZNF747Q9BV97 191 aa8.14□□□□□ -1.11
ECM1-201ENST00000346569 MAP6D1Q9H9H5 199 aa8.14□□□□□ -1.11
ECM1-201ENST00000346569 NAT8BQ9UHF3 227 aa8.14□□□□□ -1.11
ECM1-201ENST00000346569 TENM1Q9UKZ4 2725 aa8.14□□□□□ -1.11
ECM1-201ENST00000346569 IGKV3D-20A0A0C4DH25 116 aa8.13□□□□□ -1.11
ECM1-201ENST00000346569 HIGD1CA8MV81 97 aa8.13□□□□□ -1.11
ECM1-201ENST00000346569 H3BMM0 161 aa8.13□□□□□ -1.11
ECM1-201ENST00000346569 GZMBP10144 247 aa8.13□□□□□ -1.11
ECM1-201ENST00000346569 HLA-DRB4P13762 266 aa8.13□□□□□ -1.11
ECM1-201ENST00000346569 KIR3DS1Q14943 382 aa8.13□□□□□ -1.11
ECM1-201ENST00000346569 ODF3L2Q3SX64 289 aa8.13□□□□□ -1.11
ECM1-201ENST00000346569 LINC01559Q495D7 138 aa8.13□□□□□ -1.11
ECM1-201ENST00000346569 Q6AWC8 147 aa8.13□□□□□ -1.11
ECM1-201ENST00000346569 HLA-DRB4X5D2U9 266 aa8.13□□□□□ -1.11
ECM1-201ENST00000346569 KNCNA6PVL3 124 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 TRGC2P03986 189 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 GPX1P07203 203 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 INSL3P51460 131 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 CMC4P56277 68 aaPredicted RBP8.12□□□□□ -1.11
ECM1-201ENST00000346569 RPS20P60866 119 aaKnown RBP8.12□□□□□ -1.11
ECM1-201ENST00000346569 CLUHP3Q96NS8 147 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 FAM110AQ9BQ89 295 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 C19orf73Q9NVV2 129 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 TMA7Q9Y2S6 64 aaKnown RBP8.12□□□□□ -1.11
ECM1-201ENST00000346569 AGRNO00468 2067 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 TRAV21A0A0B4J279 112 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 XKRY2A2RUG3 117 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 C1orf196B1AJZ1 125 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 ZNF324O75467 553 aaPredicted RBP8.12□□□□□ -1.11
ECM1-201ENST00000346569 ORM1P02763 201 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 IGLC6P0CF74 106 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 ZNF124Q15973 351 aa8.12□□□□□ -1.11
ECM1-201ENST00000346569 TMSB15BA0A087X1C1 80 aa8.11□□□□□ -1.11
ECM1-201ENST00000346569 A0A1B0GXF2 115 aa8.11□□□□□ -1.11
ECM1-201ENST00000346569 SPINK4O60575 86 aa8.11□□□□□ -1.11
ECM1-201ENST00000346569 RNASE4P34096 147 aaKnown RBP8.11□□□□□ -1.11
ECM1-201ENST00000346569 LEPP41159 167 aa8.11□□□□□ -1.11
ECM1-201ENST00000346569 COX19Q49B96 90 aa8.11□□□□□ -1.11
ECM1-201ENST00000346569 RASL11AQ6T310 242 aa8.11□□□□□ -1.11
ECM1-201ENST00000346569 ATP5L2Q7Z4Y8 100 aa8.11□□□□□ -1.11
ECM1-201ENST00000346569 PGLYRP4Q96LB8 373 aa8.11□□□□□ -1.11
ECM1-201ENST00000346569 GNB1LQ9BYB4 327 aa8.11□□□□□ -1.11
ECM1-201ENST00000346569 RBMY1BA6NDE4 496 aaKnown RBP8.1□□□□□ -1.11
ECM1-201ENST00000346569 RBMY1EA6NEQ0 496 aaKnown RBP8.1□□□□□ -1.11
ECM1-201ENST00000346569 J3KRW8 73 aa8.1□□□□□ -1.11
ECM1-201ENST00000346569 IGKV3-20P01619 116 aa8.1□□□□□ -1.11
ECM1-201ENST00000346569 CD7P09564 240 aa8.1□□□□□ -1.11
ECM1-201ENST00000346569 RBMY1DP0C7P1 496 aaKnown RBP8.1□□□□□ -1.11
ECM1-201ENST00000346569 TSPOP30536 169 aa8.1□□□□□ -1.11
ECM1-201ENST00000346569 CDKN1BP46527 198 aa8.1□□□□□ -1.11
ECM1-201ENST00000346569 ACTL10Q5JWF8 245 aa8.1□□□□□ -1.11
ECM1-201ENST00000346569 C9orf66Q5T8R8 295 aa8.1□□□□□ -1.11
ECM1-201ENST00000346569 MRPL54Q6P161 138 aaKnown RBP8.1□□□□□ -1.11
ECM1-201ENST00000346569 TMEM136Q6ZRR5 245 aa8.1□□□□□ -1.11
ECM1-201ENST00000346569 FRZBQ92765 325 aa8.1□□□□□ -1.11
ECM1-201ENST00000346569 SSBP4Q9BWG4 385 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms