RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 GUSBP1Q15486 140 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 Q6ZWC4 215 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 CHAC1Q9BUX1 264 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 HTN3P15516 51 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 NTF4P34130 210 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 ATP5EP56381 51 aaPredicted RBP2.88□□□□□ -1.95
SYNE1-201ENST00000341594 TNFAIP6P98066 277 aaPredicted RBP2.88□□□□□ -1.95
SYNE1-201ENST00000341594 TMEM86BQ8N661 226 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 PRSS38A1L453 326 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 HOXB2P14652 356 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 RETNLBQ9BQ08 111 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 PHLDA1Q8WV24 401 aaPredicted RBP2.88□□□□□ -1.95
SYNE1-201ENST00000341594 TMEM200BQ69YZ2 307 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 TRGV8A0A0C4DH27 118 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 IFI27L1Q96BM0 104 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 TEN1Q86WV5 123 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 NDUFC1O43677 76 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 TRIAP1O43715 76 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 SEM1Q6ZVN7 128 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 PHF7Q9BWX1 381 aaPredicted RBP2.87□□□□□ -1.95
SYNE1-201ENST00000341594 M0R135 149 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 WFDC9Q8NEX5 89 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 ZNF799Q96GE5 643 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 ZIC4Q8N9L1 334 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 A0A1B0GW54 56 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 METTL26Q96S19 204 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 NOTCH2Q04721 2471 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 Q6ZQT7 251 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 LINC01548A6NM66 108 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 M0R2P5 195 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 VDAC2P45880 294 aaPredicted RBP2.87□□□□□ -1.95
SYNE1-201ENST00000341594 PROP1O75360 226 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 IGHV3-11P01762 117 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 ZNF525Q8N782 197 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 TRAV26-2A0A0B4J265 109 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 FHL1Q13642 323 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 PMAIP1Q13794 54 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 DTX1Q86Y01 620 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 EXOC3-AS1Q8N2X6 119 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 A0A096LPF7 62 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 CIARTQ8N365 385 aaPredicted RBP2.87□□□□□ -1.95
SYNE1-201ENST00000341594 MPLKIPQ8TAP9 179 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 PLA2G2AP14555 144 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 HLA-DMBP28068 263 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 FGF22Q9HCT0 170 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 NBR2O15453 112 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 TMEM14CQ9P0S9 112 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 K7EN84 100 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 F2RL2O00254 374 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 SH2D1AO60880 128 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 SLPIP03973 132 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 KLHL30-AS1Q8NEE0 82 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 UQCRQO14949 82 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 C1QTNF5Q9BXJ0 243 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 IGKV1D-13A0A0B4J2D9 117 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 IGKV1-13P0DP09 117 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 OSR1Q8TAX0 266 aaPredicted RBP2.87□□□□□ -1.95
SYNE1-201ENST00000341594 PRR4Q16378 134 aa2.87□□□□□ -1.95
SYNE1-201ENST00000341594 IGLV3-12A0A075B6K2 115 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 APOHP02749 345 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-201ENST00000341594 ORMDL2Q53FV1 153 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 BVES-AS1Q5T3Y7 98 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 PMS2CLQ68D20 193 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 COX8CQ7Z4L0 72 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 CLEC7AQ9BXN2 247 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 TEX36Q5VZQ5 186 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 CHCHD5Q9BSY4 110 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 ITLN1Q8WWA0 313 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 PRSS22Q9GZN4 317 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 SHISA2Q6UWI4 295 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 BGLAPP02818 100 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 TMEM92Q6UXU6 159 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 NPCDR1Q9BY65 106 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 ORMDL3Q8N138 153 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 IGKV2-40A0A087WW87 121 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-201ENST00000341594 IGHV3-38A0A0C4DH36 116 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 IGKV2D-40P01614 121 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-201ENST00000341594 DSCR4P56555 118 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-201ENST00000341594 HERVK_113P63121 156 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 JPT1Q9UK76 154 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 WDR83OSQ9Y284 106 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 PSG4Q00888 419 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 NPFFO15130 113 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 C3orf22Q8N5N4 141 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 A0A1W2PPV9 198 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 C19orf54Q5BKX5 351 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 PIK3CD-AS1Q5SR53 167 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 LOC107984640A0A0U1RRK4 108 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 KLK5Q9Y337 293 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-201ENST00000341594 IGLC7A0M8Q6 106 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 RHODO00212 210 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 EFNA2O43921 213 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 ZNF493Q6ZR52 646 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 RNF182Q8N6D2 247 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 TDHQ8IZJ6 230 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 LYZL4Q96KX0 146 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 CNFNQ9BYD5 112 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 MORN5Q5VZ52 161 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 UFSP1Q6NVU6 142 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 NABP1Q96AH0 204 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms