RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 C1orf159Q96HA4 380 aa10.16□□□□□ -0.78
DNMT1-201ENST00000340748 DOCK7Q96N67 2140 aa10.15□□□□□ -0.78
DNMT1-201ENST00000340748 C9orf66Q5T8R8 295 aa10.15□□□□□ -0.78
DNMT1-201ENST00000340748 FGF23Q9GZV9 251 aaPredicted RBP10.15□□□□□ -0.78
DNMT1-201ENST00000340748 C22orf46C9J442 243 aa10.15□□□□□ -0.78
DNMT1-201ENST00000340748 I3L3M4 83 aa10.15□□□□□ -0.78
DNMT1-201ENST00000340748 ZNF114Q8NC26 417 aa10.15□□□□□ -0.78
DNMT1-201ENST00000340748 LYPD6Q86Y78 171 aa10.15□□□□□ -0.79
DNMT1-201ENST00000340748 CACNA1AO00555 2505 aa10.15□□□□□ -0.79
DNMT1-201ENST00000340748 CLPSL1A2RUU4 121 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 LEPROTO15243 131 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 LTAP01374 205 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 RIPPLY3P57055 190 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 TP53TG1Q9Y2A0 90 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 PAX4O43316 350 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 SLAQ13239 276 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 DEFB104AQ8WTQ1 72 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 ELANEP08246 267 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 UBE2V1Q13404 147 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 SS18Q15532 418 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 C2orf66Q6UXQ4 117 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 CTSZQ9UBR2 303 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 IGLC7A0M8Q6 106 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 SPINK13Q1W4C9 94 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 NEGR1Q7Z3B1 354 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 ZC2HC1AQ96GY0 325 aa10.14□□□□□ -0.79
DNMT1-201ENST00000340748 ZNF491Q8N8L2 437 aa10.13□□□□□ -0.79
DNMT1-201ENST00000340748 OR11H6Q8NGC7 330 aa10.13□□□□□ -0.79
DNMT1-201ENST00000340748 PHLDA1Q8WV24 401 aaPredicted RBP10.13□□□□□ -0.79
DNMT1-201ENST00000340748 IGHV7-4-1A0A0J9YVY3 117 aa10.13□□□□□ -0.79
DNMT1-201ENST00000340748 CDKN1BP46527 198 aa10.13□□□□□ -0.79
DNMT1-201ENST00000340748 NPC2P61916 151 aa10.13□□□□□ -0.79
DNMT1-201ENST00000340748 ZNF124Q15973 351 aa10.13□□□□□ -0.79
DNMT1-201ENST00000340748 C6orf226Q5I0X4 101 aa10.13□□□□□ -0.79
DNMT1-201ENST00000340748 JPT2Q9H910 190 aa10.13□□□□□ -0.79
DNMT1-201ENST00000340748 CCL24O00175 119 aa10.13□□□□□ -0.79
DNMT1-201ENST00000340748 SRSF2Q01130 221 aaKnown RBP10.13□□□□□ -0.79
DNMT1-201ENST00000340748 ANXA2RQ3ZCQ2 193 aa10.13□□□□□ -0.79
DNMT1-201ENST00000340748 PMVKQ15126 192 aa10.12□□□□□ -0.79
DNMT1-201ENST00000340748 MRPL53Q96EL3 112 aaKnown RBP10.12□□□□□ -0.79
DNMT1-201ENST00000340748 SPXQ9BT56 116 aa10.12□□□□□ -0.79
DNMT1-201ENST00000340748 STPG4Q8N801 248 aa10.12□□□□□ -0.79
DNMT1-201ENST00000340748 TRAV13-1A0A0B4J241 112 aa10.12□□□□□ -0.79
DNMT1-201ENST00000340748 IGHV1-24A0A0C4DH33 117 aa10.12□□□□□ -0.79
DNMT1-201ENST00000340748 LGALS9BQ3B8N2 356 aa10.12□□□□□ -0.79
DNMT1-201ENST00000340748 LGALS9CQ6DKI2 356 aa10.12□□□□□ -0.79
DNMT1-201ENST00000340748 NAA38Q9BRA0 125 aaKnown RBP10.12□□□□□ -0.79
DNMT1-201ENST00000340748 C11orf68Q9H3H3 251 aaKnown RBP10.12□□□□□ -0.79
DNMT1-201ENST00000340748 PTPN13Q12923 2485 aa10.12□□□□□ -0.79
DNMT1-201ENST00000340748 DENND4CQ5VZ89 1909 aa10.12□□□□□ -0.79
DNMT1-201ENST00000340748 PYGO2Q9BRQ0 406 aa10.12□□□□□ -0.79
DNMT1-201ENST00000340748 CST9LQ9H4G1 147 aa10.12□□□□□ -0.79
DNMT1-201ENST00000340748 SSBP2P81877 361 aaPredicted RBP10.12□□□□□ -0.79
DNMT1-201ENST00000340748 TCTEX1D4Q5JR98 221 aa10.12□□□□□ -0.79
DNMT1-201ENST00000340748 KLK9Q9UKQ9 250 aa10.11□□□□□ -0.79
DNMT1-201ENST00000340748 RBAKDNA6NC62 111 aa10.11□□□□□ -0.79
DNMT1-201ENST00000340748 Q6ZWC4 215 aa10.11□□□□□ -0.79
DNMT1-201ENST00000340748 PRIMA1Q86XR5 153 aa10.11□□□□□ -0.79
DNMT1-201ENST00000340748 HIVEP2P31629 2446 aa10.11□□□□□ -0.79
DNMT1-201ENST00000340748 GATD1Q8NB37 220 aa10.11□□□□□ -0.79
DNMT1-201ENST00000340748 WIPF2Q8TF74 440 aaPredicted RBP10.11□□□□□ -0.79
DNMT1-201ENST00000340748 EREGO14944 169 aa10.11□□□□□ -0.79
DNMT1-201ENST00000340748 XCL2Q9UBD3 114 aa10.11□□□□□ -0.79
DNMT1-201ENST00000340748 KIAA2026Q5HYC2 2103 aa10.11□□□□□ -0.79
DNMT1-201ENST00000340748 CENPVL3A0A0U1RRI6 287 aa10.1□□□□□ -0.79
DNMT1-201ENST00000340748 IGHV4-31P0DP07 118 aa10.1□□□□□ -0.79
DNMT1-201ENST00000340748 NPBQ8NG41 125 aa10.1□□□□□ -0.79
DNMT1-201ENST00000340748 COX11Q9Y6N1 276 aa10.1□□□□□ -0.79
DNMT1-201ENST00000340748 LGALS1P09382 135 aaKnown RBP10.1□□□□□ -0.79
DNMT1-201ENST00000340748 K7EN84 100 aa10.1□□□□□ -0.79
DNMT1-201ENST00000340748 C2orf82Q6UX34 121 aa10.1□□□□□ -0.79
DNMT1-201ENST00000340748 SIGLEC8Q9NYZ4 499 aa10.1□□□□□ -0.79
DNMT1-201ENST00000340748 SDHAF1A6NFY7 115 aa10.1□□□□□ -0.79
DNMT1-201ENST00000340748 C20orf78Q9BR46 151 aa10.09□□□□□ -0.79
DNMT1-201ENST00000340748 DNAJC9-AS1A6NH13 148 aa10.09□□□□□ -0.79
DNMT1-201ENST00000340748 DEFB130BP0DP73 79 aa10.09□□□□□ -0.79
DNMT1-201ENST00000340748 DEFB130AP0DP74 79 aa10.09□□□□□ -0.79
DNMT1-201ENST00000340748 TRBV25-1A0A075B6N4 114 aa10.09□□□□□ -0.79
DNMT1-201ENST00000340748 AZU1P20160 251 aa10.09□□□□□ -0.79
DNMT1-201ENST00000340748 SHISA2Q6UWI4 295 aa10.09□□□□□ -0.79
DNMT1-201ENST00000340748 ATP6V0BQ99437 205 aa10.09□□□□□ -0.79
DNMT1-201ENST00000340748 ANAPC13Q9BS18 74 aa10.09□□□□□ -0.79
DNMT1-201ENST00000340748 IGLC2P0DOY2 106 aa10.08□□□□□ -0.8
DNMT1-201ENST00000340748 IGLC3P0DOY3 106 aa10.08□□□□□ -0.8
DNMT1-201ENST00000340748 SPRNQ5BIV9 151 aa10.08□□□□□ -0.8
DNMT1-201ENST00000340748 LENEPQ9Y5L5 61 aa10.08□□□□□ -0.8
DNMT1-201ENST00000340748 KNCNA6PVL3 124 aa10.08□□□□□ -0.8
DNMT1-201ENST00000340748 SMIM2Q9BVW6 85 aa10.08□□□□□ -0.8
DNMT1-201ENST00000340748 DAD1P61803 113 aa10.08□□□□□ -0.8
DNMT1-201ENST00000340748 KLF5Q13887 457 aaPredicted RBP10.08□□□□□ -0.8
DNMT1-201ENST00000340748 GAGE12JA6NER3 117 aa10.07□□□□□ -0.8
DNMT1-201ENST00000340748 NPYP01303 97 aa10.07□□□□□ -0.8
DNMT1-201ENST00000340748 COX8AP10176 69 aa10.07□□□□□ -0.8
DNMT1-201ENST00000340748 GAGE1Q13065 139 aa10.07□□□□□ -0.8
DNMT1-201ENST00000340748 GAGE4Q13068 117 aa10.07□□□□□ -0.8
DNMT1-201ENST00000340748 GAGE5Q13069 117 aa10.07□□□□□ -0.8
DNMT1-201ENST00000340748 TRAV26-2A0A0B4J265 109 aa10.07□□□□□ -0.8
DNMT1-201ENST00000340748 HLA-DRB4P13762 266 aa10.07□□□□□ -0.8
DNMT1-201ENST00000340748 BBC3Q96PG8 261 aaPredicted RBP10.07□□□□□ -0.8
DNMT1-201ENST00000340748 HLA-DRB4X5D2U9 266 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms