RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PLAC8L1A1L4L8 177 aa13.66□□□□□ -0.22
SYNE4-202ENST00000340477 FGF8P55075 233 aaPredicted RBP13.66□□□□□ -0.22
SYNE4-202ENST00000340477 SUMO1P63165 101 aaKnown RBP13.66□□□□□ -0.22
SYNE4-202ENST00000340477 EIF5AL1Q6IS14 154 aaKnown RBP13.66□□□□□ -0.22
SYNE4-202ENST00000340477 DPPA3Q6W0C5 159 aa13.66□□□□□ -0.22
SYNE4-202ENST00000340477 FAM210BQ96KR6 192 aa13.66□□□□□ -0.22
SYNE4-202ENST00000340477 NDUFAF3Q9BU61 184 aa13.66□□□□□ -0.22
SYNE4-202ENST00000340477 NOP10Q9NPE3 64 aaKnown RBP13.66□□□□□ -0.22
SYNE4-202ENST00000340477 FBLL1A6NHQ2 334 aaKnown RBP13.65□□□□□ -0.22
SYNE4-202ENST00000340477 ZNF324O75467 553 aaPredicted RBP13.65□□□□□ -0.22
SYNE4-202ENST00000340477 IFNA7P01567 189 aa13.65□□□□□ -0.22
SYNE4-202ENST00000340477 C1QBP02746 253 aa13.65□□□□□ -0.22
SYNE4-202ENST00000340477 TCRAP04437 139 aa13.65□□□□□ -0.22
SYNE4-202ENST00000340477 PRR9Q5T870 116 aa13.65□□□□□ -0.22
SYNE4-202ENST00000340477 CYB561D1Q8N8Q1 229 aa13.65□□□□□ -0.22
SYNE4-202ENST00000340477 FAM213BQ8TBF2 198 aa13.65□□□□□ -0.22
SYNE4-202ENST00000340477 PLA2G2EQ9NZK7 142 aa13.65□□□□□ -0.22
SYNE4-202ENST00000340477 IGHV1OR15-1A0A075B7D0 117 aa13.64□□□□□ -0.23
SYNE4-202ENST00000340477 GGTLC3B5MD39 225 aa13.64□□□□□ -0.23
SYNE4-202ENST00000340477 PPT1P50897 306 aa13.64□□□□□ -0.23
SYNE4-202ENST00000340477 UBE2G2P60604 165 aa13.64□□□□□ -0.23
SYNE4-202ENST00000340477 ANXA2RQ3ZCQ2 193 aa13.64□□□□□ -0.23
SYNE4-202ENST00000340477 ATG101Q9BSB4 218 aa13.64□□□□□ -0.23
SYNE4-202ENST00000340477 TMPRSS5Q9H3S3 457 aa13.64□□□□□ -0.23
SYNE4-202ENST00000340477 TREM1Q9NP99 234 aa13.64□□□□□ -0.23
SYNE4-202ENST00000340477 EPDR1Q9UM22 224 aa13.64□□□□□ -0.23
SYNE4-202ENST00000340477 PLECQ15149 4684 aaKnown RBP13.63□□□□□ -0.23
SYNE4-202ENST00000340477 TRAV8-1A0A0A6YYK1 113 aa13.63□□□□□ -0.23
SYNE4-202ENST00000340477 ATP5G1P05496 136 aa13.63□□□□□ -0.23
SYNE4-202ENST00000340477 ATP5G3P48201 142 aa13.63□□□□□ -0.23
SYNE4-202ENST00000340477 ZFP69Q49AA0 526 aa13.63□□□□□ -0.23
SYNE4-202ENST00000340477 LGALS9CQ6DKI2 356 aa13.63□□□□□ -0.23
SYNE4-202ENST00000340477 APLNQ9ULZ1 77 aa13.63□□□□□ -0.23
SYNE4-202ENST00000340477 Q6AWC8 147 aa13.62□□□□□ -0.23
SYNE4-202ENST00000340477 FAM159AQ6UWV7 190 aa13.62□□□□□ -0.23
SYNE4-202ENST00000340477 TMEM75Q8N9X5 138 aa13.62□□□□□ -0.23
SYNE4-202ENST00000340477 SFT2D1Q8WV19 159 aa13.62□□□□□ -0.23
SYNE4-202ENST00000340477 TRAV21A0A0B4J279 112 aa13.61□□□□□ -0.23
SYNE4-202ENST00000340477 FHITP49789 147 aa13.61□□□□□ -0.23
SYNE4-202ENST00000340477 ZNF415Q09FC8 603 aa13.61□□□□□ -0.23
SYNE4-202ENST00000340477 DAZ2Q13117 558 aaKnown RBP13.61□□□□□ -0.23
SYNE4-202ENST00000340477 IBA57Q5T440 356 aaKnown RBP13.61□□□□□ -0.23
SYNE4-202ENST00000340477 GSN-AS1Q9NRJ2 163 aa13.61□□□□□ -0.23
SYNE4-202ENST00000340477 NAGKQ9UJ70 344 aa13.61□□□□□ -0.23
SYNE4-202ENST00000340477 PSG8Q9UQ74 426 aa13.61□□□□□ -0.23
SYNE4-202ENST00000340477 TRGV11A0A075B6L2 103 aa13.6□□□□□ -0.23
SYNE4-202ENST00000340477 FAM74A7A6NL05 159 aa13.6□□□□□ -0.23
SYNE4-202ENST00000340477 F5H768 121 aa13.6□□□□□ -0.23
SYNE4-202ENST00000340477 F6UZH7 168 aa13.6□□□□□ -0.23
SYNE4-202ENST00000340477 FLI1Q01543 452 aaPredicted RBP13.6□□□□□ -0.23
SYNE4-202ENST00000340477 LGALSLQ3ZCW2 172 aaPredicted RBP13.6□□□□□ -0.23
SYNE4-202ENST00000340477 MUC21Q5SSG8 566 aa13.6□□□□□ -0.23
SYNE4-202ENST00000340477 HIST1H2BAQ96A08 127 aa13.6□□□□□ -0.23
SYNE4-202ENST00000340477 SGK494Q96LW2 274 aa13.6□□□□□ -0.23
SYNE4-202ENST00000340477 TCEAL7Q9BRU2 100 aa13.6□□□□□ -0.23
SYNE4-202ENST00000340477 ARL2-SNX15V9GYD0 113 aa13.6□□□□□ -0.23
SYNE4-202ENST00000340477 GAGE12BA1L429 117 aa13.59□□□□□ -0.23
SYNE4-202ENST00000340477 PEX7O00628 323 aa13.59□□□□□ -0.23
SYNE4-202ENST00000340477 GAGE7O76087 117 aa13.59□□□□□ -0.23
SYNE4-202ENST00000340477 H2AFB1P0C5Y9 115 aa13.59□□□□□ -0.23
SYNE4-202ENST00000340477 GAGE12FP0CL80 117 aa13.59□□□□□ -0.23
SYNE4-202ENST00000340477 GAGE12GP0CL81 117 aa13.59□□□□□ -0.23
SYNE4-202ENST00000340477 GAGE12IP0CL82 117 aa13.59□□□□□ -0.23
SYNE4-202ENST00000340477 RAB5CP51148 216 aa13.59□□□□□ -0.23
SYNE4-202ENST00000340477 TCL1AP56279 114 aa13.59□□□□□ -0.23
SYNE4-202ENST00000340477 SAPCD1Q5SSQ6 148 aa13.59□□□□□ -0.23
SYNE4-202ENST00000340477 CST9LP1Q5W188 147 aa13.59□□□□□ -0.23
SYNE4-202ENST00000340477 PRNTQ86SH4 94 aa13.59□□□□□ -0.23
SYNE4-202ENST00000340477 SACSQ9NZJ4 4579 aa13.58□□□□□ -0.24
SYNE4-202ENST00000340477 TRGV1A0A0A0MS02 117 aa13.58□□□□□ -0.24
SYNE4-202ENST00000340477 TEX46H3BTG2 121 aa13.58□□□□□ -0.24
SYNE4-202ENST00000340477 TMEM88Q6PEY1 159 aa13.58□□□□□ -0.24
SYNE4-202ENST00000340477 SLC51BQ86UW2 128 aa13.58□□□□□ -0.24
SYNE4-202ENST00000340477 C15orf53Q8NAA6 179 aa13.58□□□□□ -0.24
SYNE4-202ENST00000340477 C11orf72Q8NBR9 251 aa13.58□□□□□ -0.24
SYNE4-202ENST00000340477 MBD3L1Q8WWY6 194 aa13.58□□□□□ -0.24
SYNE4-202ENST00000340477 TRGV2A0A075B6R0 118 aa13.57□□□□□ -0.24
SYNE4-202ENST00000340477 A0A1B0GV50 99 aa13.57□□□□□ -0.24
SYNE4-202ENST00000340477 P0DMU3 169 aa13.57□□□□□ -0.24
SYNE4-202ENST00000340477 FAM231AP0DMU4 169 aa13.57□□□□□ -0.24
SYNE4-202ENST00000340477 FAM231CP0DMU5 169 aa13.57□□□□□ -0.24
SYNE4-202ENST00000340477 SMUG1Q53HV7 270 aa13.57□□□□□ -0.24
SYNE4-202ENST00000340477 LINC00612Q8N6U2 182 aa13.57□□□□□ -0.24
SYNE4-202ENST00000340477 KCNS1Q96KK3 526 aa13.57□□□□□ -0.24
SYNE4-202ENST00000340477 RYR3Q15413 4870 aa13.57□□□□□ -0.24
SYNE4-202ENST00000340477 UBE2G1P62253 170 aa13.56□□□□□ -0.24
SYNE4-202ENST00000340477 TMEM183BQ1AE95 376 aa13.56□□□□□ -0.24
SYNE4-202ENST00000340477 Q6ZQT7 251 aa13.56□□□□□ -0.24
SYNE4-202ENST00000340477 TMEM183AQ8IXX5 376 aa13.56□□□□□ -0.24
SYNE4-202ENST00000340477 SDF2L1Q9HCN8 221 aa13.56□□□□□ -0.24
SYNE4-202ENST00000340477 TP53TG3Q9ULZ0 132 aa13.56□□□□□ -0.24
SYNE4-202ENST00000340477 GCGP01275 180 aa13.55□□□□□ -0.24
SYNE4-202ENST00000340477 Q6ZTI0 123 aa13.55□□□□□ -0.24
SYNE4-202ENST00000340477 TVP23CQ96ET8 276 aa13.55□□□□□ -0.24
SYNE4-202ENST00000340477 KLF12Q9Y4X4 402 aa13.55□□□□□ -0.24
SYNE4-202ENST00000340477 DNAH1Q9P2D7 4330 aa13.54□□□□□ -0.24
SYNE4-202ENST00000340477 SPINK4O60575 86 aa13.54□□□□□ -0.24
SYNE4-202ENST00000340477 PAGE4O60829 102 aa13.54□□□□□ -0.24
SYNE4-202ENST00000340477 IGLV2-11P01706 119 aa13.54□□□□□ -0.24
SYNE4-202ENST00000340477 LGALS9BQ3B8N2 356 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms