RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 SPATA25Q9BR10 227 aa12.94□□□□□ -0.34
CDC42EP4-201ENST00000335793 IGHV3-49A0A0A0MS15 119 aa12.94□□□□□ -0.34
CDC42EP4-201ENST00000335793 HLA-DMBP28068 263 aa12.94□□□□□ -0.34
CDC42EP4-201ENST00000335793 LOXL1Q08397 574 aaPredicted RBP12.94□□□□□ -0.34
CDC42EP4-201ENST00000335793 VKORC1Q9BQB6 163 aa12.94□□□□□ -0.34
CDC42EP4-201ENST00000335793 TSPAN13O95857 204 aa12.93□□□□□ -0.34
CDC42EP4-201ENST00000335793 RPL7P18124 248 aaKnown RBP12.93□□□□□ -0.34
CDC42EP4-201ENST00000335793 ORMDL3Q8N138 153 aa12.93□□□□□ -0.34
CDC42EP4-201ENST00000335793 RNF5Q99942 180 aa12.93□□□□□ -0.34
CDC42EP4-201ENST00000335793 CACNG7P62955 275 aa12.93□□□□□ -0.34
CDC42EP4-201ENST00000335793 ZNF747Q9BV97 191 aa12.93□□□□□ -0.34
CDC42EP4-201ENST00000335793 CACNA1AO00555 2505 aa12.93□□□□□ -0.34
CDC42EP4-201ENST00000335793 APOMO95445 188 aa12.93□□□□□ -0.34
CDC42EP4-201ENST00000335793 ZNF418Q8TF45 676 aaPredicted RBP12.93□□□□□ -0.34
CDC42EP4-201ENST00000335793 LYPD1Q8N2G4 141 aa12.92□□□□□ -0.34
CDC42EP4-201ENST00000335793 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDC42EP4-201ENST00000335793 Q6AWC8 147 aa12.91□□□□□ -0.34
CDC42EP4-201ENST00000335793 SIGLEC8Q9NYZ4 499 aa12.91□□□□□ -0.34
CDC42EP4-201ENST00000335793 AGRNO00468 2067 aa12.91□□□□□ -0.34
CDC42EP4-201ENST00000335793 FGF6P10767 208 aa12.91□□□□□ -0.34
CDC42EP4-201ENST00000335793 GAGE5Q13069 117 aa12.91□□□□□ -0.34
CDC42EP4-201ENST00000335793 GAGE6Q13070 117 aa12.91□□□□□ -0.34
CDC42EP4-201ENST00000335793 SMAD7O15105 426 aaKnown RBP12.91□□□□□ -0.34
CDC42EP4-201ENST00000335793 ASH1LQ9NR48 2969 aaKnown RBP12.91□□□□□ -0.34
CDC42EP4-201ENST00000335793 ARL3P36405 182 aa12.9□□□□□ -0.34
CDC42EP4-201ENST00000335793 XGP55808 180 aa12.9□□□□□ -0.34
CDC42EP4-201ENST00000335793 RPL32P62910 135 aaKnown RBP12.9□□□□□ -0.34
CDC42EP4-201ENST00000335793 GAGE13Q4V321 117 aa12.9□□□□□ -0.34
CDC42EP4-201ENST00000335793 C1QTNF4Q9BXJ3 329 aa12.9□□□□□ -0.34
CDC42EP4-201ENST00000335793 PRSS29PA6NIE9 313 aa12.9□□□□□ -0.34
CDC42EP4-201ENST00000335793 FANCD2OSQ96PS1 177 aa12.9□□□□□ -0.34
CDC42EP4-201ENST00000335793 NDPQ00604 133 aa12.89□□□□□ -0.35
CDC42EP4-201ENST00000335793 FAM104BQ5XKR9 115 aa12.89□□□□□ -0.35
CDC42EP4-201ENST00000335793 PKD1L2Q7Z442 2459 aa12.89□□□□□ -0.35
CDC42EP4-201ENST00000335793 EGR2P11161 476 aaPredicted RBP12.89□□□□□ -0.35
CDC42EP4-201ENST00000335793 ZNF562Q6V9R5 426 aa12.89□□□□□ -0.35
CDC42EP4-201ENST00000335793 PTH2Q96A98 100 aa12.89□□□□□ -0.35
CDC42EP4-201ENST00000335793 CYSLTR1Q9Y271 337 aa12.89□□□□□ -0.35
CDC42EP4-201ENST00000335793 ERCC8Q13216 396 aa12.89□□□□□ -0.35
CDC42EP4-201ENST00000335793 MRPL51Q4U2R6 128 aaKnown RBP12.89□□□□□ -0.35
CDC42EP4-201ENST00000335793 LINC01545Q5VT33 79 aa12.89□□□□□ -0.35
CDC42EP4-201ENST00000335793 LY6LH3BQJ8 138 aa12.88□□□□□ -0.35
CDC42EP4-201ENST00000335793 PRSS1P07477 247 aa12.88□□□□□ -0.35
CDC42EP4-201ENST00000335793 EVI2AP22794 236 aa12.88□□□□□ -0.35
CDC42EP4-201ENST00000335793 PRR25Q96S07 402 aa12.88□□□□□ -0.35
CDC42EP4-201ENST00000335793 MSRB1Q9NZV6 116 aa12.88□□□□□ -0.35
CDC42EP4-201ENST00000335793 ERG28Q9UKR5 140 aa12.88□□□□□ -0.35
CDC42EP4-201ENST00000335793 SVEP1Q4LDE5 3571 aa12.88□□□□□ -0.35
CDC42EP4-201ENST00000335793 J3KRW8 73 aa12.88□□□□□ -0.35
CDC42EP4-201ENST00000335793 TGFAP01135 160 aa12.88□□□□□ -0.35
CDC42EP4-201ENST00000335793 VMO1Q7Z5L0 202 aa12.88□□□□□ -0.35
CDC42EP4-201ENST00000335793 OR11H12B2RN74 326 aa12.87□□□□□ -0.35
CDC42EP4-201ENST00000335793 OR11H1Q8NG94 326 aa12.87□□□□□ -0.35
CDC42EP4-201ENST00000335793 OR11H2Q8NH07 326 aa12.87□□□□□ -0.35
CDC42EP4-201ENST00000335793 WI2-2373I1.2A0A1W2PRP0 233 aa12.87□□□□□ -0.35
CDC42EP4-201ENST00000335793 HBDP02042 147 aa12.87□□□□□ -0.35
CDC42EP4-201ENST00000335793 PDE6HQ13956 83 aa12.87□□□□□ -0.35
CDC42EP4-201ENST00000335793 RNF182Q8N6D2 247 aa12.87□□□□□ -0.35
CDC42EP4-201ENST00000335793 IGLV11-55A0A075B6I3 123 aa12.86□□□□□ -0.35
CDC42EP4-201ENST00000335793 NPYP01303 97 aa12.86□□□□□ -0.35
CDC42EP4-201ENST00000335793 PRTN3P24158 256 aa12.86□□□□□ -0.35
CDC42EP4-201ENST00000335793 IFI27L1Q96BM0 104 aa12.86□□□□□ -0.35
CDC42EP4-201ENST00000335793 DCHS2Q6V1P9 2916 aa12.86□□□□□ -0.35
CDC42EP4-201ENST00000335793 MAP1AP78559 2803 aaPredicted RBP12.86□□□□□ -0.35
CDC42EP4-201ENST00000335793 F8W1H4 67 aa12.86□□□□□ -0.35
CDC42EP4-201ENST00000335793 ATP5J2P56134 94 aa12.86□□□□□ -0.35
CDC42EP4-201ENST00000335793 DYNAPQ8N1N2 210 aa12.86□□□□□ -0.35
CDC42EP4-201ENST00000335793 CFHR4Q92496 578 aa12.86□□□□□ -0.35
CDC42EP4-201ENST00000335793 ZNF80P51504 273 aaPredicted RBP12.86□□□□□ -0.35
CDC42EP4-201ENST00000335793 C15orf32Q32M92 178 aa12.86□□□□□ -0.35
CDC42EP4-201ENST00000335793 FOXI2Q6ZQN5 318 aa12.86□□□□□ -0.35
CDC42EP4-201ENST00000335793 OR11H6Q8NGC7 330 aa12.85□□□□□ -0.35
CDC42EP4-201ENST00000335793 NDUFS7O75251 213 aa12.85□□□□□ -0.35
CDC42EP4-201ENST00000335793 HOXB4P17483 251 aaPredicted RBP12.85□□□□□ -0.35
CDC42EP4-201ENST00000335793 CLEC19AQ6UXS0 136 aa12.84□□□□□ -0.35
CDC42EP4-201ENST00000335793 Q6ZUT4 128 aa12.84□□□□□ -0.35
CDC42EP4-201ENST00000335793 KIR2DL4Q99706 377 aa12.84□□□□□ -0.35
CDC42EP4-201ENST00000335793 CTSGP08311 255 aa12.84□□□□□ -0.35
CDC42EP4-201ENST00000335793 FHL3Q13643 280 aa12.84□□□□□ -0.35
CDC42EP4-201ENST00000335793 MAP1LC3AQ9H492 121 aa12.84□□□□□ -0.35
CDC42EP4-201ENST00000335793 CREBBPQ92793 2442 aa12.84□□□□□ -0.35
CDC42EP4-201ENST00000335793 FABP5P3A8MUU1 101 aa12.84□□□□□ -0.35
CDC42EP4-201ENST00000335793 CCDC179H3BU77 68 aa12.84□□□□□ -0.35
CDC42EP4-201ENST00000335793 MRPS12O15235 138 aaKnown RBP12.84□□□□□ -0.35
CDC42EP4-201ENST00000335793 CDSNQ15517 529 aa12.84□□□□□ -0.35
CDC42EP4-201ENST00000335793 CDIP1Q9H305 208 aa12.84□□□□□ -0.35
CDC42EP4-201ENST00000335793 DKK2Q9UBU2 259 aa12.84□□□□□ -0.35
CDC42EP4-201ENST00000335793 NPBQ8NG41 125 aa12.83□□□□□ -0.36
CDC42EP4-201ENST00000335793 TRBV6-1A0A0K0K1D8 114 aa12.83□□□□□ -0.36
CDC42EP4-201ENST00000335793 NDUFA3O95167 84 aa12.83□□□□□ -0.36
CDC42EP4-201ENST00000335793 OR4X2Q8NGF9 303 aa12.83□□□□□ -0.36
CDC42EP4-201ENST00000335793 LINC01548A6NM66 108 aa12.82□□□□□ -0.36
CDC42EP4-201ENST00000335793 K7ENP7 123 aa12.82□□□□□ -0.36
CDC42EP4-201ENST00000335793 LEPP41159 167 aa12.82□□□□□ -0.36
CDC42EP4-201ENST00000335793 LINC00527Q9UJ94 153 aa12.82□□□□□ -0.36
CDC42EP4-201ENST00000335793 LY6G5BQ8NDX9 201 aa12.82□□□□□ -0.36
CDC42EP4-201ENST00000335793 PRAC2D3DTV9 90 aa12.82□□□□□ -0.36
CDC42EP4-201ENST00000335793 GATA1P15976 413 aaPredicted RBP12.82□□□□□ -0.36
CDC42EP4-201ENST00000335793 IGKV2D-26A0A0A0MRZ7 120 aa12.81□□□□□ -0.36
CDC42EP4-201ENST00000335793 M0R1W7 72 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms