RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 FABP5P3A8MUU1 101 aa12.65□□□□□ -0.38
CACFD1-202ENST00000316948 INSL3P51460 131 aa12.65□□□□□ -0.38
CACFD1-202ENST00000316948 HRNRQ86YZ3 2850 aaPredicted RBP12.65□□□□□ -0.39
CACFD1-202ENST00000316948 TRGV3P03979 118 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 PSMG4Q5JS54 123 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 CCDC144NLQ6NUI1 221 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 SMAD5-AS1Q9Y6J3 95 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 PTPRQQ9UMZ3 2332 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 COL6A6A6NMZ7 2263 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 AGRNO00468 2067 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 SPTBN4Q9H254 2564 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 CHD8Q9HCK8 2581 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.64□□□□□ -0.39
CACFD1-202ENST00000316948 NBR2O15453 112 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 IGHG4P01861 327 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 DYNAPQ8N1N2 210 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 MYOZ3Q8TDC0 251 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 FANCD2OSQ96PS1 177 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 PRAC2D3DTV9 90 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 ATP5G2Q06055 141 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 GAGE13Q4V321 117 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 Q5PR19 223 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 COX8CQ7Z4L0 72 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 TTC9CQ8N5M4 171 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 SMPXQ9UHP9 88 aa12.64□□□□□ -0.39
CACFD1-202ENST00000316948 SPTBN1Q01082 2364 aaKnown RBP12.63□□□□□ -0.39
CACFD1-202ENST00000316948 F8W735 103 aaPredicted RBP12.63□□□□□ -0.39
CACFD1-202ENST00000316948 LY6HO94772 140 aa12.63□□□□□ -0.39
CACFD1-202ENST00000316948 SCGB1A1P11684 91 aa12.63□□□□□ -0.39
CACFD1-202ENST00000316948 EFNA4P52798 201 aa12.63□□□□□ -0.39
CACFD1-202ENST00000316948 RNF182Q8N6D2 247 aa12.63□□□□□ -0.39
CACFD1-202ENST00000316948 Q8N8P6 123 aa12.63□□□□□ -0.39
CACFD1-202ENST00000316948 SRSF8Q9BRL6 282 aaKnown RBP12.63□□□□□ -0.39
CACFD1-202ENST00000316948 C21orf62Q9NYP8 219 aa12.63□□□□□ -0.39
CACFD1-202ENST00000316948 UFC1Q9Y3C8 167 aa12.63□□□□□ -0.39
CACFD1-202ENST00000316948 VPS13CQ709C8 3753 aa12.63□□□□□ -0.39
CACFD1-202ENST00000316948 LINC01546A6NGU7 62 aa12.63□□□□□ -0.39
CACFD1-202ENST00000316948 A0A1B0GV72 72 aa12.62□□□□□ -0.39
CACFD1-202ENST00000316948 B9A039 149 aa12.62□□□□□ -0.39
CACFD1-202ENST00000316948 IL17RELQ6ZVW7 336 aa12.62□□□□□ -0.39
CACFD1-202ENST00000316948 LINC01560Q8TB33 94 aa12.62□□□□□ -0.39
CACFD1-202ENST00000316948 CFHR4Q92496 578 aa12.62□□□□□ -0.39
CACFD1-202ENST00000316948 ATP6V0BQ99437 205 aa12.62□□□□□ -0.39
CACFD1-202ENST00000316948 LY6LH3BQJ8 138 aa12.62□□□□□ -0.39
CACFD1-202ENST00000316948 CLUHP3Q96NS8 147 aa12.62□□□□□ -0.39
CACFD1-202ENST00000316948 NCOR2Q9Y618 2525 aa12.61□□□□□ -0.39
CACFD1-202ENST00000316948 SPTAN1Q13813 2472 aaKnown RBP12.61□□□□□ -0.39
CACFD1-202ENST00000316948 IGLV11-55A0A075B6I3 123 aa12.61□□□□□ -0.39
CACFD1-202ENST00000316948 IGHV3-66A0A0C4DH42 116 aa12.61□□□□□ -0.39
CACFD1-202ENST00000316948 CD3EP07766 207 aa12.61□□□□□ -0.39
CACFD1-202ENST00000316948 SRSF1Q07955 248 aaKnown RBP eCLIP12.61□□□□□ -0.39
CACFD1-202ENST00000316948 RNF5Q99942 180 aa12.61□□□□□ -0.39
CACFD1-202ENST00000316948 CNFNQ9BYD5 112 aa12.61□□□□□ -0.39
CACFD1-202ENST00000316948 KLK15Q9H2R5 256 aa12.61□□□□□ -0.39
CACFD1-202ENST00000316948 IGLV2-18A0A075B6J9 118 aa12.6□□□□□ -0.39
CACFD1-202ENST00000316948 NCBP2LA6PVI3 153 aaKnown RBP12.6□□□□□ -0.39
CACFD1-202ENST00000316948 KLRD1Q13241 179 aa12.6□□□□□ -0.39
CACFD1-202ENST00000316948 LAGE3Q14657 143 aa12.6□□□□□ -0.39
CACFD1-202ENST00000316948 A0A1B0GWB2 263 aa12.6□□□□□ -0.39
CACFD1-202ENST00000316948 WFDC12Q8WWY7 111 aa12.6□□□□□ -0.39
CACFD1-202ENST00000316948 IGHV3OR16-13A0A075B7E8 117 aa12.59□□□□□ -0.39
CACFD1-202ENST00000316948 IGHV3-74A0A0B4J1X5 117 aa12.59□□□□□ -0.39
CACFD1-202ENST00000316948 RRN3P1Q2M238 152 aa12.59□□□□□ -0.39
CACFD1-202ENST00000316948 SFTA2Q6UW10 78 aa12.59□□□□□ -0.39
CACFD1-202ENST00000316948 SPATA25Q9BR10 227 aa12.59□□□□□ -0.39
CACFD1-202ENST00000316948 IGKV3D-20A0A0C4DH25 116 aa12.59□□□□□ -0.39
CACFD1-202ENST00000316948 NDPQ00604 133 aa12.59□□□□□ -0.39
CACFD1-202ENST00000316948 C11orf21Q9P2W6 132 aa12.59□□□□□ -0.39
CACFD1-202ENST00000316948 CYSLTR1Q9Y271 337 aa12.59□□□□□ -0.39
CACFD1-202ENST00000316948 A0A087WX48 190 aa12.58□□□□□ -0.39
CACFD1-202ENST00000316948 RAB9AP51151 201 aa12.58□□□□□ -0.39
CACFD1-202ENST00000316948 NDUFS8O00217 210 aa12.58□□□□□ -0.4
CACFD1-202ENST00000316948 GRNP28799 593 aaKnown RBP12.58□□□□□ -0.4
CACFD1-202ENST00000316948 PSMG3-AS1Q96PY0 264 aa12.58□□□□□ -0.4
CACFD1-202ENST00000316948 CTSGP08311 255 aa12.58□□□□□ -0.4
CACFD1-202ENST00000316948 CKS1BP61024 79 aa12.58□□□□□ -0.4
CACFD1-202ENST00000316948 C5orf64Q2M2E5 130 aa12.58□□□□□ -0.4
CACFD1-202ENST00000316948 LINC01559Q495D7 138 aa12.58□□□□□ -0.4
CACFD1-202ENST00000316948 ZNF672Q499Z4 452 aaPredicted RBP12.58□□□□□ -0.4
CACFD1-202ENST00000316948 Q6ZQT7 251 aa12.58□□□□□ -0.4
CACFD1-202ENST00000316948 C20orf78Q9BR46 151 aa12.58□□□□□ -0.4
CACFD1-202ENST00000316948 TAL2Q16559 108 aa12.57□□□□□ -0.4
CACFD1-202ENST00000316948 DPM3Q9P2X0 92 aa12.57□□□□□ -0.4
CACFD1-202ENST00000316948 PRO0461Q9UI25 63 aa12.57□□□□□ -0.4
CACFD1-202ENST00000316948 NRACQ8N912 160 aa12.57□□□□□ -0.4
CACFD1-202ENST00000316948 APOMO95445 188 aa12.56□□□□□ -0.4
CACFD1-202ENST00000316948 HLA-DRB4P13762 266 aa12.56□□□□□ -0.4
CACFD1-202ENST00000316948 ZNF502Q8TBZ5 544 aa12.56□□□□□ -0.4
CACFD1-202ENST00000316948 HLA-DRB4X5D2U9 266 aa12.56□□□□□ -0.4
CACFD1-202ENST00000316948 TRBV7-3A0A075B6L6 115 aa12.56□□□□□ -0.4
CACFD1-202ENST00000316948 OR11H12B2RN74 326 aa12.56□□□□□ -0.4
CACFD1-202ENST00000316948 SRSF2Q01130 221 aaKnown RBP12.56□□□□□ -0.4
CACFD1-202ENST00000316948 OR11H1Q8NG94 326 aa12.56□□□□□ -0.4
CACFD1-202ENST00000316948 OR11H2Q8NH07 326 aa12.56□□□□□ -0.4
CACFD1-202ENST00000316948 IGHV3-49A0A0A0MS15 119 aa12.55□□□□□ -0.4
CACFD1-202ENST00000316948 FAM90A27PA6NNH2 459 aa12.55□□□□□ -0.4
CACFD1-202ENST00000316948 PLNP26678 52 aa12.55□□□□□ -0.4
CACFD1-202ENST00000316948 SPANXN1Q5VSR9 72 aa12.55□□□□□ -0.4
CACFD1-202ENST00000316948 SCGB2A2Q13296 93 aa12.55□□□□□ -0.4
CACFD1-202ENST00000316948 PGPEP1Q9NXJ5 209 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms