RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 ASPHD1Q5U4P2 390 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 ZC2HC1AQ96GY0 325 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 MEGF9Q9H1U4 602 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 ADAMTS20P59510 1910 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 DDTP30046 118 aa10.65□□□□□ -0.71
DDX54-202ENST00000314045 AGPAT4-IT1Q9H0P7 198 aa10.65□□□□□ -0.71
DDX54-202ENST00000314045 TNRC6BQ9UPQ9 1833 aaKnown RBP10.64□□□□□ -0.71
DDX54-202ENST00000314045 CHCHD1Q96BP2 118 aaKnown RBP10.64□□□□□ -0.71
DDX54-202ENST00000314045 TMEM213A2RRL7 107 aa10.64□□□□□ -0.71
DDX54-202ENST00000314045 TANC2Q9HCD6 1990 aa10.64□□□□□ -0.71
DDX54-202ENST00000314045 IGHV3-73A0A0B4J1V6 119 aa10.64□□□□□ -0.71
DDX54-202ENST00000314045 F6UB75 175 aa10.64□□□□□ -0.71
DDX54-202ENST00000314045 CCL24O00175 119 aa10.64□□□□□ -0.71
DDX54-202ENST00000314045 IGHV4-31P0DP07 118 aa10.64□□□□□ -0.71
DDX54-202ENST00000314045 OR11H2Q8NH07 326 aa10.64□□□□□ -0.71
DDX54-202ENST00000314045 TSSC4Q9Y5U2 329 aaPredicted RBP10.64□□□□□ -0.71
DDX54-202ENST00000314045 ORMDL2Q53FV1 153 aa10.63□□□□□ -0.71
DDX54-202ENST00000314045 ACANP16112 2415 aa10.63□□□□□ -0.71
DDX54-202ENST00000314045 C12orf54Q6X4T0 127 aa10.63□□□□□ -0.71
DDX54-202ENST00000314045 OR4C5Q8NGB2 326 aa10.63□□□□□ -0.71
DDX54-202ENST00000314045 CYSLTR1Q9Y271 337 aa10.63□□□□□ -0.71
DDX54-202ENST00000314045 KNCNA6PVL3 124 aa10.63□□□□□ -0.71
DDX54-202ENST00000314045 SMKR1H3BMG3 65 aa10.63□□□□□ -0.71
DDX54-202ENST00000314045 ZNF876PQ49A33 203 aa10.63□□□□□ -0.71
DDX54-202ENST00000314045 TRAV8-6A0A0B4J262 113 aa10.63□□□□□ -0.71
DDX54-202ENST00000314045 SLURP1P55000 103 aa10.63□□□□□ -0.71
DDX54-202ENST00000314045 C14orf144Q96I85 54 aa10.63□□□□□ -0.71
DDX54-202ENST00000314045 TRAV12-2A0A075B6T6 113 aa10.62□□□□□ -0.71
DDX54-202ENST00000314045 A6NDN8 102 aa10.62□□□□□ -0.71
DDX54-202ENST00000314045 PRSS2P07478 247 aa10.62□□□□□ -0.71
DDX54-202ENST00000314045 ZNF25P17030 456 aaPredicted RBP10.62□□□□□ -0.71
DDX54-202ENST00000314045 EBI3Q14213 229 aa10.62□□□□□ -0.71
DDX54-202ENST00000314045 IGKV1D-37A0A075B6S9 117 aa10.62□□□□□ -0.71
DDX54-202ENST00000314045 CDKN1BP46527 198 aa10.62□□□□□ -0.71
DDX54-202ENST00000314045 SUMO2P61956 95 aaKnown RBP10.62□□□□□ -0.71
DDX54-202ENST00000314045 PRSS57Q6UWY2 283 aa10.62□□□□□ -0.71
DDX54-202ENST00000314045 TMEM101Q96IK0 257 aa10.62□□□□□ -0.71
DDX54-202ENST00000314045 A0A087WWL8 130 aa10.62□□□□□ -0.71
DDX54-202ENST00000314045 K7EN84 100 aa10.62□□□□□ -0.71
DDX54-202ENST00000314045 HINT1P49773 126 aaPredicted RBP10.62□□□□□ -0.71
DDX54-202ENST00000314045 IFI27L1Q96BM0 104 aa10.62□□□□□ -0.71
DDX54-202ENST00000314045 WI2-2373I1.2A0A1W2PRP0 233 aa10.61□□□□□ -0.71
DDX54-202ENST00000314045 CRYGBP07316 175 aa10.61□□□□□ -0.71
DDX54-202ENST00000314045 LGALS3P17931 250 aaKnown RBP10.61□□□□□ -0.71
DDX54-202ENST00000314045 KLK9Q9UKQ9 250 aa10.61□□□□□ -0.71
DDX54-202ENST00000314045 FLNBO75369 2602 aaKnown RBP10.61□□□□□ -0.71
DDX54-202ENST00000314045 LOC102724200A0A096LPH7 203 aaPredicted RBP10.61□□□□□ -0.71
DDX54-202ENST00000314045 JOSD1Q15040 202 aaPredicted RBP10.61□□□□□ -0.71
DDX54-202ENST00000314045 ANXA2RQ3ZCQ2 193 aa10.61□□□□□ -0.71
DDX54-202ENST00000314045 TRIOO75962 3097 aa10.61□□□□□ -0.71
DDX54-202ENST00000314045 LTAP01374 205 aa10.61□□□□□ -0.71
DDX54-202ENST00000314045 IGHV3-53P01767 116 aa10.61□□□□□ -0.71
DDX54-202ENST00000314045 TYMSP04818 313 aa10.61□□□□□ -0.71
DDX54-202ENST00000314045 DEFB104AQ8WTQ1 72 aa10.61□□□□□ -0.71
DDX54-202ENST00000314045 A8MWP6 167 aa10.61□□□□□ -0.71
DDX54-202ENST00000314045 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
DDX54-202ENST00000314045 COTL1Q14019 142 aa10.61□□□□□ -0.71
DDX54-202ENST00000314045 VCX2Q9H322 139 aa10.61□□□□□ -0.71
DDX54-202ENST00000314045 NACAE9PAV3 2078 aa10.6□□□□□ -0.71
DDX54-202ENST00000314045 ATP6V0BQ99437 205 aa10.6□□□□□ -0.71
DDX54-202ENST00000314045 MS4A6AQ9H2W1 248 aa10.6□□□□□ -0.71
DDX54-202ENST00000314045 PRSS46E5RG02 174 aa10.6□□□□□ -0.71
DDX54-202ENST00000314045 ZNF124Q15973 351 aa10.6□□□□□ -0.71
DDX54-202ENST00000314045 MIEN1Q9BRT3 115 aa10.6□□□□□ -0.71
DDX54-202ENST00000314045 IGHV1OR15-1A0A075B7D0 117 aa10.6□□□□□ -0.71
DDX54-202ENST00000314045 RIPPLY3P57055 190 aa10.59□□□□□ -0.71
DDX54-202ENST00000314045 C16orf54Q6UWD8 224 aa10.59□□□□□ -0.71
DDX54-202ENST00000314045 IGHV4OR15-8A0A075B7B6 117 aa10.59□□□□□ -0.71
DDX54-202ENST00000314045 A0A087WW49 117 aa10.59□□□□□ -0.71
DDX54-202ENST00000314045 GCSHP23434 173 aa10.59□□□□□ -0.71
DDX54-202ENST00000314045 ZNF48Q96MX3 618 aaPredicted RBP10.59□□□□□ -0.71
DDX54-202ENST00000314045 SMIM27A0A1W2PRY6 76 aa10.59□□□□□ -0.71
DDX54-202ENST00000314045 PSMB2P49721 201 aa10.59□□□□□ -0.71
DDX54-202ENST00000314045 MRPL53Q96EL3 112 aaKnown RBP10.59□□□□□ -0.71
DDX54-202ENST00000314045 SNAI2O43623 268 aa10.58□□□□□ -0.72
DDX54-202ENST00000314045 LAGE3Q14657 143 aa10.58□□□□□ -0.72
DDX54-202ENST00000314045 PYY3Q5JQD4 70 aa10.58□□□□□ -0.72
DDX54-202ENST00000314045 COL5A1-AS1Q5SY13 56 aa10.58□□□□□ -0.72
DDX54-202ENST00000314045 FAM104BQ5XKR9 115 aa10.58□□□□□ -0.72
DDX54-202ENST00000314045 PET117Q6UWS5 81 aa10.58□□□□□ -0.72
DDX54-202ENST00000314045 C2orf88Q9BSF0 95 aa10.58□□□□□ -0.72
DDX54-202ENST00000314045 TRBV12-3P01733 135 aa10.58□□□□□ -0.72
DDX54-202ENST00000314045 BBC3Q96PG8 261 aaPredicted RBP10.58□□□□□ -0.72
DDX54-202ENST00000314045 HIST1H4GQ99525 98 aa10.58□□□□□ -0.72
DDX54-202ENST00000314045 TMEM89A2RUT3 159 aa10.58□□□□□ -0.72
DDX54-202ENST00000314045 SNCGO76070 127 aa10.58□□□□□ -0.72
DDX54-202ENST00000314045 A0A1B0GUS0 222 aa10.58□□□□□ -0.72
DDX54-202ENST00000314045 RPL36AP83881 106 aaKnown RBP10.58□□□□□ -0.72
DDX54-202ENST00000314045 RPL36ALQ969Q0 106 aaKnown RBP10.58□□□□□ -0.72
DDX54-202ENST00000314045 CBY1Q9Y3M2 126 aa10.58□□□□□ -0.72
DDX54-202ENST00000314045 VCYO14598 125 aa10.57□□□□□ -0.72
DDX54-202ENST00000314045 UNQ9165/PRO28630Q6UXU0 137 aa10.57□□□□□ -0.72
DDX54-202ENST00000314045 GPHB5Q86YW7 130 aa10.57□□□□□ -0.72
DDX54-202ENST00000314045 OR2K2Q8NGT1 345 aa10.57□□□□□ -0.72
DDX54-202ENST00000314045 PTPRBP23467 1997 aa10.57□□□□□ -0.72
DDX54-202ENST00000314045 OR9G4Q8NGQ1 327 aa10.57□□□□□ -0.72
DDX54-202ENST00000314045 LENEPQ9Y5L5 61 aa10.57□□□□□ -0.72
DDX54-202ENST00000314045 IGF1P05019 195 aa10.57□□□□□ -0.72
DDX54-202ENST00000314045 DEFB121Q5J5C9 76 aa10.57□□□□□ -0.72
DDX54-202ENST00000314045 CSTL1Q9H114 145 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms