RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 LENEPQ9Y5L5 61 aa16.07■□□□□ 0.16
ATG4D-201ENST00000309469 A0A1B0GW15 77 aa16.06■□□□□ 0.16
ATG4D-201ENST00000309469 SAMD13Q5VXD3 122 aa16.06■□□□□ 0.16
ATG4D-201ENST00000309469 LYZL1Q6UWQ5 148 aa16.06■□□□□ 0.16
ATG4D-201ENST00000309469 ZNF575Q86XF7 245 aa16.06■□□□□ 0.16
ATG4D-201ENST00000309469 C18orf32Q8TCD1 76 aa16.06■□□□□ 0.16
ATG4D-201ENST00000309469 BORCS7Q96B45 105 aa16.06■□□□□ 0.16
ATG4D-201ENST00000309469 RCHY1Q96PM5 261 aa16.06■□□□□ 0.16
ATG4D-201ENST00000309469 SAMD10Q9BYL1 202 aa16.06■□□□□ 0.16
ATG4D-201ENST00000309469 HIST1H1AQ02539 215 aaPredicted RBP16.06■□□□□ 0.16
ATG4D-201ENST00000309469 PRR31Q5SQ13 230 aa16.06■□□□□ 0.16
ATG4D-201ENST00000309469 DCANP1Q8TF63 244 aa16.06■□□□□ 0.16
ATG4D-201ENST00000309469 KCNS1Q96KK3 526 aa16.06■□□□□ 0.16
ATG4D-201ENST00000309469 ALKBH7Q9BT30 221 aaPredicted RBP16.06■□□□□ 0.16
ATG4D-201ENST00000309469 ID1P41134 155 aa16.05■□□□□ 0.16
ATG4D-201ENST00000309469 KLF5Q13887 457 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-201ENST00000309469 LINC01559Q495D7 138 aa16.05■□□□□ 0.16
ATG4D-201ENST00000309469 DEFB1P60022 68 aa16.04■□□□□ 0.16
ATG4D-201ENST00000309469 SCGB2A2Q13296 93 aa16.04■□□□□ 0.16
ATG4D-201ENST00000309469 GATD1Q8NB37 220 aa16.04■□□□□ 0.16
ATG4D-201ENST00000309469 DEFB136Q30KP8 78 aa16.04■□□□□ 0.16
ATG4D-201ENST00000309469 WFDC3Q8IUB2 231 aa16.04■□□□□ 0.16
ATG4D-201ENST00000309469 OR8A1Q8NGG7 326 aa16.04■□□□□ 0.16
ATG4D-201ENST00000309469 C4orf3Q8WVX3 66 aa16.04■□□□□ 0.16
ATG4D-201ENST00000309469 TLN2Q9Y4G6 2542 aa16.03■□□□□ 0.16
ATG4D-201ENST00000309469 C2orf70A6NJV1 201 aa16.03■□□□□ 0.16
ATG4D-201ENST00000309469 IGLC6P0CF74 106 aa16.03■□□□□ 0.16
ATG4D-201ENST00000309469 IQCJQ1A5X6 159 aa16.03■□□□□ 0.16
ATG4D-201ENST00000309469 FER1L6-AS1Q8NA97 138 aa16.03■□□□□ 0.16
ATG4D-201ENST00000309469 MS4A6AQ9H2W1 248 aa16.03■□□□□ 0.16
ATG4D-201ENST00000309469 TMEM160Q9NX00 188 aa16.03■□□□□ 0.16
ATG4D-201ENST00000309469 LINC01619G3V211 115 aa16.02■□□□□ 0.16
ATG4D-201ENST00000309469 LOC102724200A0A096LPH7 203 aaPredicted RBP16.02■□□□□ 0.15
ATG4D-201ENST00000309469 F6UB75 175 aa16.02■□□□□ 0.15
ATG4D-201ENST00000309469 GPX1P07203 203 aa16.02■□□□□ 0.15
ATG4D-201ENST00000309469 CTRLP40313 264 aa16.02■□□□□ 0.15
ATG4D-201ENST00000309469 SLURP1P55000 103 aa16.02■□□□□ 0.15
ATG4D-201ENST00000309469 C11orf21Q9P2W6 132 aa16.02■□□□□ 0.15
ATG4D-201ENST00000309469 IGKV3D-20A0A0C4DH25 116 aa16.01■□□□□ 0.15
ATG4D-201ENST00000309469 RNASE1P07998 156 aaKnown RBP16.01■□□□□ 0.15
ATG4D-201ENST00000309469 KHDC1LQ5JSQ8 128 aa16.01■□□□□ 0.15
ATG4D-201ENST00000309469 Q6ZWC4 215 aa16.01■□□□□ 0.15
ATG4D-201ENST00000309469 OR11H1Q8NG94 326 aa16.01■□□□□ 0.15
ATG4D-201ENST00000309469 AKAP9Q99996 3911 aa16.01■□□□□ 0.15
ATG4D-201ENST00000309469 SCGB1D1O95968 90 aa16■□□□□ 0.15
ATG4D-201ENST00000309469 OR1N2Q8NGR9 330 aa16■□□□□ 0.15
ATG4D-201ENST00000309469 DPF1Q92782 380 aa16■□□□□ 0.15
ATG4D-201ENST00000309469 ZNF324O75467 553 aaPredicted RBP16■□□□□ 0.15
ATG4D-201ENST00000309469 TFPI2P48307 235 aa16■□□□□ 0.15
ATG4D-201ENST00000309469 AMTP48728 403 aa16■□□□□ 0.15
ATG4D-201ENST00000309469 PRR9Q5T870 116 aa16■□□□□ 0.15
ATG4D-201ENST00000309469 ZFAND2AQ8N6M9 145 aa16■□□□□ 0.15
ATG4D-201ENST00000309469 FAM19A4Q96LR4 140 aa16■□□□□ 0.15
ATG4D-201ENST00000309469 SMR3AQ99954 134 aa16■□□□□ 0.15
ATG4D-201ENST00000309469 M0QZ24 198 aa15.99■□□□□ 0.15
ATG4D-201ENST00000309469 PMCHP20382 165 aa15.99■□□□□ 0.15
ATG4D-201ENST00000309469 SSTP61278 116 aa15.99■□□□□ 0.15
ATG4D-201ENST00000309469 ZNF493Q6ZR52 646 aa15.99■□□□□ 0.15
ATG4D-201ENST00000309469 PKIAP61925 76 aa15.98■□□□□ 0.15
ATG4D-201ENST00000309469 ADAMTSL5Q6ZMM2 481 aa15.98■□□□□ 0.15
ATG4D-201ENST00000309469 KLHL30-AS1Q8NEE0 82 aa15.98■□□□□ 0.15
ATG4D-201ENST00000309469 SONP18583 2426 aaKnown RBP15.98■□□□□ 0.15
ATG4D-201ENST00000309469 MUC21A0A0G2JKD1 596 aa15.98■□□□□ 0.15
ATG4D-201ENST00000309469 MUC21A0A140T8X8 626 aa15.98■□□□□ 0.15
ATG4D-201ENST00000309469 K7EQG2 157 aa15.98■□□□□ 0.15
ATG4D-201ENST00000309469 MUC21Q5SSG8 566 aa15.98■□□□□ 0.15
ATG4D-201ENST00000309469 Q6ZQT7 251 aa15.98■□□□□ 0.15
ATG4D-201ENST00000309469 ZNF418Q8TF45 676 aaPredicted RBP15.98■□□□□ 0.15
ATG4D-201ENST00000309469 NAGKQ9UJ70 344 aa15.98■□□□□ 0.15
ATG4D-201ENST00000309469 TRBV7-9A0A0J9YWB2 115 aa15.97■□□□□ 0.15
ATG4D-201ENST00000309469 WFDC12Q8WWY7 111 aa15.97■□□□□ 0.15
ATG4D-201ENST00000309469 DUX3Q96PT4 197 aa15.97■□□□□ 0.15
ATG4D-201ENST00000309469 C16orf95Q9H693 158 aa15.96■□□□□ 0.15
ATG4D-201ENST00000309469 FASNP49327 2511 aaKnown RBP15.96■□□□□ 0.15
ATG4D-201ENST00000309469 TSTD3H0UI37 97 aa15.96■□□□□ 0.14
ATG4D-201ENST00000309469 J3KRW8 73 aa15.96■□□□□ 0.14
ATG4D-201ENST00000309469 ZNF688P0C7X2 276 aa15.96■□□□□ 0.14
ATG4D-201ENST00000309469 CD33P20138 364 aa15.96■□□□□ 0.14
ATG4D-201ENST00000309469 NTF3P20783 257 aa15.96■□□□□ 0.14
ATG4D-201ENST00000309469 SNRPD3P62318 126 aaKnown RBP15.96■□□□□ 0.14
ATG4D-201ENST00000309469 DEFA6Q01524 100 aa15.96■□□□□ 0.14
ATG4D-201ENST00000309469 TWIST1Q15672 202 aa15.96■□□□□ 0.14
ATG4D-201ENST00000309469 HIST2H2BDQ6DRA6 164 aa15.96■□□□□ 0.14
ATG4D-201ENST00000309469 CNFNQ9BYD5 112 aa15.96■□□□□ 0.14
ATG4D-201ENST00000309469 PEMTQ9UBM1 199 aa15.96■□□□□ 0.14
ATG4D-201ENST00000309469 HSBP1O75506 76 aa15.95■□□□□ 0.14
ATG4D-201ENST00000309469 PSMG4Q5JS54 123 aa15.95■□□□□ 0.14
ATG4D-201ENST00000309469 RNASEKQ6P5S7 137 aaKnown RBP15.95■□□□□ 0.14
ATG4D-201ENST00000309469 APRG1Q8IVJ8 170 aa15.95■□□□□ 0.14
ATG4D-201ENST00000309469 OR9G4Q8NGQ1 327 aa15.95■□□□□ 0.14
ATG4D-201ENST00000309469 HECTD1Q9ULT8 2610 aa15.95■□□□□ 0.14
ATG4D-201ENST00000309469 TRAV21A0A0B4J279 112 aa15.94■□□□□ 0.14
ATG4D-201ENST00000309469 LY6G6DO95868 133 aa15.94■□□□□ 0.14
ATG4D-201ENST00000309469 HILS1P60008 231 aa15.94■□□□□ 0.14
ATG4D-201ENST00000309469 FAM19A2Q8N3H0 131 aa15.94■□□□□ 0.14
ATG4D-201ENST00000309469 LINC00469Q8N7U9 141 aa15.94■□□□□ 0.14
ATG4D-201ENST00000309469 LINC01006Q8NI28 216 aa15.94■□□□□ 0.14
ATG4D-201ENST00000309469 DLX4Q92988 240 aaPredicted RBP15.94■□□□□ 0.14
ATG4D-201ENST00000309469 PRO1933Q9H354 126 aa15.94■□□□□ 0.14
ATG4D-201ENST00000309469 ACANP16112 2415 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms