RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 PRO0628Q9UI54 55 aa12.26□□□□□ -0.45
LEMD3-201ENST00000308330 A0A0B4J2C4 111 aa12.26□□□□□ -0.45
LEMD3-201ENST00000308330 LINC01620Q4KN68 170 aa12.26□□□□□ -0.45
LEMD3-201ENST00000308330 IGF2-ASQ6U949 168 aa12.26□□□□□ -0.45
LEMD3-201ENST00000308330 C16orf92Q96LL3 132 aa12.26□□□□□ -0.45
LEMD3-201ENST00000308330 FAM240AA0A1B0GVK7 77 aa12.26□□□□□ -0.45
LEMD3-201ENST00000308330 E7EQL1 145 aa12.26□□□□□ -0.45
LEMD3-201ENST00000308330 TMEM190Q8WZ59 177 aa12.26□□□□□ -0.45
LEMD3-201ENST00000308330 ZNF581Q9P0T4 197 aa12.26□□□□□ -0.45
LEMD3-201ENST00000308330 ARFGEF3Q5TH69 2177 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 ARMS2P0C7Q2 107 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 CR1LQ2VPA4 569 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 Q6Q795 121 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 Q6ZRM9 215 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 JMJD1CQ15652 2540 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 HELZP42694 1942 aaKnown RBP12.25□□□□□ -0.45
LEMD3-201ENST00000308330 SMKR1H3BMG3 65 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 TMEM178BH3BS89 294 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 S4R3C0 116 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 C11orf44Q8N8P7 122 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 Q8TCH9 128 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 BPESC1Q9GZL8 116 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 PFN2P35080 140 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 PLEKHB2Q96CS7 222 aa12.25□□□□□ -0.45
LEMD3-201ENST00000308330 A0A1W2PRX2 142 aa12.24□□□□□ -0.45
LEMD3-201ENST00000308330 TMEM213A2RRL7 107 aa12.24□□□□□ -0.45
LEMD3-201ENST00000308330 J3QLI3 93 aa12.24□□□□□ -0.45
LEMD3-201ENST00000308330 C5orf63A6NC05 138 aa12.24□□□□□ -0.45
LEMD3-201ENST00000308330 IGKV3-15P01624 115 aa12.24□□□□□ -0.45
LEMD3-201ENST00000308330 NPPCP23582 126 aa12.24□□□□□ -0.45
LEMD3-201ENST00000308330 LINC00643Q86TS7 51 aa12.24□□□□□ -0.45
LEMD3-201ENST00000308330 Q8N1Y9 231 aa12.24□□□□□ -0.45
LEMD3-201ENST00000308330 EEF1AKMT3Q96AZ1 226 aa12.24□□□□□ -0.45
LEMD3-201ENST00000308330 IGKV1-12A0A0C4DH73 117 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 FAM236DA0A1B0GTK5 79 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 IGKV1D-12P01611 117 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 FAM236CP0DP71 79 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 IGHV3-64A0A075B6Q5 118 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 SOCS3O14543 225 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 FAM215AQ9Y5M1 114 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 CGB1A6NKQ9 187 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 LTAP01374 205 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 DAD1P61803 113 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 PRSS22Q9GZN4 317 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 IGHV3OR16-12A0A075B7B8 117 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 IGHV3-11P01762 117 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 TM2D2Q9BX73 214 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 TTTY13Q9BZ97 58 aa12.23□□□□□ -0.45
LEMD3-201ENST00000308330 IGHV3-49A0A0A0MS15 119 aa12.22□□□□□ -0.45
LEMD3-201ENST00000308330 COL8A2P25067 703 aa12.22□□□□□ -0.45
LEMD3-201ENST00000308330 SHISA9B4DS77 424 aa12.22□□□□□ -0.45
LEMD3-201ENST00000308330 FRMD6-AS1P0C7T7 363 aa12.22□□□□□ -0.45
LEMD3-201ENST00000308330 NUP210Q8TEM1 1887 aaPredicted RBP12.22□□□□□ -0.45
LEMD3-201ENST00000308330 WISP1O95388 367 aa12.22□□□□□ -0.45
LEMD3-201ENST00000308330 DYSFO75923 2080 aa12.22□□□□□ -0.45
LEMD3-201ENST00000308330 RNF223E7ERA6 249 aa12.21□□□□□ -0.45
LEMD3-201ENST00000308330 C19orf54Q5BKX5 351 aa12.21□□□□□ -0.45
LEMD3-201ENST00000308330 MAPK1IP1LQ8NDC0 245 aa12.21□□□□□ -0.45
LEMD3-201ENST00000308330 SIGLEC9Q9Y336 463 aa12.21□□□□□ -0.45
LEMD3-201ENST00000308330 RNF114Q9Y508 228 aa12.21□□□□□ -0.45
LEMD3-201ENST00000308330 C2orf16Q68DN1 1984 aa12.21□□□□□ -0.45
LEMD3-201ENST00000308330 RNF152Q8N8N0 203 aa12.21□□□□□ -0.45
LEMD3-201ENST00000308330 ZNF492Q9P255 531 aa12.21□□□□□ -0.45
LEMD3-201ENST00000308330 TIMM23O14925 209 aa12.21□□□□□ -0.46
LEMD3-201ENST00000308330 CRLF1O75462 422 aa12.21□□□□□ -0.46
LEMD3-201ENST00000308330 IGHV3-23P01764 117 aa12.21□□□□□ -0.46
LEMD3-201ENST00000308330 IGHG2P01859 326 aa12.21□□□□□ -0.46
LEMD3-201ENST00000308330 TCRAP04437 139 aa12.21□□□□□ -0.46
LEMD3-201ENST00000308330 BRD3OSQ6XYD6 125 aa12.21□□□□□ -0.46
LEMD3-201ENST00000308330 Q71RC1 249 aaPredicted RBP12.21□□□□□ -0.46
LEMD3-201ENST00000308330 RNF166Q96A37 237 aaPredicted RBP12.21□□□□□ -0.46
LEMD3-201ENST00000308330 ZNF625Q96I27 306 aaPredicted RBP12.21□□□□□ -0.46
LEMD3-201ENST00000308330 OVOL2Q9BRP0 275 aa12.21□□□□□ -0.46
LEMD3-201ENST00000308330 M0R381 172 aa12.21□□□□□ -0.46
LEMD3-201ENST00000308330 PSPNO60542 156 aa12.21□□□□□ -0.46
LEMD3-201ENST00000308330 FAM104BQ5XKR9 115 aa12.21□□□□□ -0.46
LEMD3-201ENST00000308330 A0A1W2PNU3 283 aaPredicted RBP12.2□□□□□ -0.46
LEMD3-201ENST00000308330 NDUFC2-KCTD14E9PQ53 114 aa12.2□□□□□ -0.46
LEMD3-201ENST00000308330 SAA2P0DJI9 122 aaPredicted RBP12.2□□□□□ -0.46
LEMD3-201ENST00000308330 NBR2O15453 112 aa12.2□□□□□ -0.46
LEMD3-201ENST00000308330 MALP21145 153 aa12.2□□□□□ -0.46
LEMD3-201ENST00000308330 PLA2G5P39877 138 aa12.2□□□□□ -0.46
LEMD3-201ENST00000308330 RPUSD1Q9UJJ7 312 aaKnown RBP12.2□□□□□ -0.46
LEMD3-201ENST00000308330 TLN2Q9Y4G6 2542 aa12.2□□□□□ -0.46
LEMD3-201ENST00000308330 IGHV3OR16-8A0A075B7F1 116 aa12.2□□□□□ -0.46
LEMD3-201ENST00000308330 ZNF497Q6ZNH5 498 aa12.2□□□□□ -0.46
LEMD3-201ENST00000308330 F8WDY8 70 aa12.19□□□□□ -0.46
LEMD3-201ENST00000308330 COX7CP15954 63 aa12.19□□□□□ -0.46
LEMD3-201ENST00000308330 TRBV10-2A0A0K0K1G8 114 aa12.19□□□□□ -0.46
LEMD3-201ENST00000308330 CRYGBP07316 175 aa12.19□□□□□ -0.46
LEMD3-201ENST00000308330 SUMO2P61956 95 aaKnown RBP12.19□□□□□ -0.46
LEMD3-201ENST00000308330 F8VRH5 84 aa12.19□□□□□ -0.46
LEMD3-201ENST00000308330 DDB2Q92466 427 aa12.19□□□□□ -0.46
LEMD3-201ENST00000308330 RNF144BQ7Z419 303 aa12.19□□□□□ -0.46
LEMD3-201ENST00000308330 TRPT1Q86TN4 253 aaKnown RBP12.19□□□□□ -0.46
LEMD3-201ENST00000308330 JPT2Q9H910 190 aa12.19□□□□□ -0.46
LEMD3-201ENST00000308330 RBAKDNA6NC62 111 aa12.18□□□□□ -0.46
LEMD3-201ENST00000308330 BAALCQ8WXS3 180 aa12.18□□□□□ -0.46
LEMD3-201ENST00000308330 C15orf62A8K5M9 175 aa12.18□□□□□ -0.46
LEMD3-201ENST00000308330 PRR14LQ5THK1 2151 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms